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The map label for this gene is ydcH [H]

Identifier: 218548860

GI number: 218548860

Start: 1541284

End: 1541520

Strand: Direct

Name: ydcH [H]

Synonym: EFER_1505

Alternate gene names: 218548860

Gene position: 1541284-1541520 (Clockwise)

Preceding gene: 218548859

Following gene: 218548861

Centisome position: 33.59

GC content: 40.93

Gene sequence:

>237_bases
ATGTTTCCAGAATACCAAGAACTCATTTCCCGACTGAAAACCGATAATCCTCGCTTTCTGTCACTCTTCAATAAACACCA
CGAACTTGATAATGAGATTGCCCGTGTAGAGGGCAGAAATGGTTGGGGATACAGCTTAGATATTGTTCATCTTAAGAAAA
AGAAACTCCAGTTGAAGGAGGAACTGCTGCGGATCTTGCAGCAGGAAAGTTTAAAAGAAAGTACCAGTGAGGTATAA

Upstream 100 bases:

>100_bases
CTGCTGATTCGTTTCCGCTCGCATTATTCCCTGTCCTGATTGAGTAACCTGAGGTTGTGTATTTCTCATACACACTATTG
GCCACTCTTAGGGAGAGCTT

Downstream 100 bases:

>100_bases
CTTTCTTTTCTGAGCCGCCGAACTGGCGGCTTTTTTGACGCTAATCAGGGGGGTTGATGCAAGAAATTATCAAAATTAAT
GATGTCATTGAGTTGCAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MFPEYQELISRLKTDNPRFLSLFNKHHELDNEIARVEGRNGWGYSLDIVHLKKKKLQLKEELLRILQQESLKESTSEV

Sequences:

>Translated_78_residues
MFPEYQELISRLKTDNPRFLSLFNKHHELDNEIARVEGRNGWGYSLDIVHLKKKKLQLKEELLRILQQESLKESTSEV
>Mature_78_residues
MFPEYQELISRLKTDNPRFLSLFNKHHELDNEIARVEGRNGWGYSLDIVHLKKKKLQLKEELLRILQQESLKESTSEV

Specific function: Unknown

COG id: COG2841

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081906, Length=73, Percent_Identity=67.1232876712329, Blast_Score=107, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007420 [H]

Pfam domain/function: PF04325 DUF465 [H]

EC number: NA

Molecular weight: Translated: 9309; Mature: 9309

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPEYQELISRLKTDNPRFLSLFNKHHELDNEIARVEGRNGWGYSLDIVHLKKKKLQLKE
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH
ELLRILQQESLKESTSEV
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFPEYQELISRLKTDNPRFLSLFNKHHELDNEIARVEGRNGWGYSLDIVHLKKKKLQLKE
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHH
ELLRILQQESLKESTSEV
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2671655; 9097039; 9278503; 7567469 [H]