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The map label for this gene is uvrC [H]

Identifier: 218548550

GI number: 218548550

Start: 1219799

End: 1221631

Strand: Direct

Name: uvrC [H]

Synonym: EFER_1181

Alternate gene names: 218548550

Gene position: 1219799-1221631 (Clockwise)

Preceding gene: 218548549

Following gene: 218548551

Centisome position: 26.58

GC content: 49.54

Gene sequence:

>1833_bases
GTGAGTGATCAGTTTGATGCCAAAGCGTTTTTAAAAACCGTTACCAGTCAGCCCGGCGTCTATCGTATGTATGATGCCGG
CGGTACGGTCATTTATGTGGGTAAAGCCAAAGACCTCAAAAAACGCCTTTCCAGTTATTTCCGCAGCAACCTTGCTTCAC
GTAAAACAGAAGCACTGGTTGCTCAGATCCAGCAAATTGATGTCACGGTGACACACACCGAGACGGAAGCTCTGTTACTG
GAGCATAACTATATTAAGCTTTATCAACCGCGCTATAACGTACTGTTGCGCGATGATAAATCTTATCCCTTTATATTCCT
GAGCGGTGACACGCACCCGCGTCTTGCTATGCATCGCGGTGCAAAGCACGCGAAAGGGGAGTATTTTGGCCCCTTCCCAA
ATGGTTATGCCGTGCGGGAAACGCTGGCACTACTCCAAAAAATCTTCCCTATCCGCCAGTGTGAAAACAGCGTTTATCGC
AACCGCTCTCGTCCTTGTCTGCAATACCAGATTGGCCGCTGCCTGGGGCCGTGTGTAGCTGGTCTGGTCAGCGAAGAAGA
GTACGCTCAGCAGGTTGAATACGTACGCCTGTTTTTATCTGGCAAAGATGATCAGGTGCTTACACAACTGATTGCACGTA
TGGAAAAGGCCAGTCAGAACCTTGAATTTGAAGAGGCAGCACGTATTCGGGATCAAATTCAGGCCGTTCGCCGGGTAACT
GAAAAACAATTTGTTTCTAATACCGGTGATGACCTGGATGTTATTGGTGTGGCGTTTGATGCAGGCATGGCATGTGTACA
TGTACTATTTATTCGTCAGGGAAAGGTACTAGGCAGTCGCAGTTATTTTCCAAAAGTTCCTGGTGGCACTGAGCTTGGCG
AAGTCGTTGAAACCTTTGTCGGGCAGTTTTATCTGCAGGGAAGCCAGATGAGAACGTTGCCTGGCGAAATCCTGCTTGAT
TTTAATCTCAGTGATAAAACGCTGCTTGCCGATTCACTTACAGAGCTGGCGGGGCGGCGGATCAACGTCCAGACCAAACC
ACGTGGTGATCGTGCGCGTTACCTTAAACTGGCGCGAACGAATGCTGCGACAGCACTGACCAGCAAGCTTTCGCAACAAT
CCACCGTTCATCAGCGTCTCTCGGCCCTCGCAACGGTATTGAAACTTCCTGAAGTTAAACGGATGGAGTGTTTCGATATC
AGTCATACCATGGGGGAACAGACCGTAGCGTCTTGTGTGGTGTTTGATGCCAATGGTCCGTTGCGGTCGGAATATCGCCG
TTACAACATTACGGGTATTACACCCGGCGATGATTATGCGGCAATGAATCAGGTTCTTCGTCGTCGCTATGGCAAAGCAA
TCGAAGAAAGTAAGATTCCGGACGTTATCCTGATCGACGGTGGTAAAGGGCAGCTGGCGCAGGCCAAAGCTGTTTTTGCC
GAACTGGATGTTCCCTGGGATAAAAACCGTCCGCTGCTTTTGGGCGTTGCCAAAGGCGCTGACCGTAAAGCCGGGCTGGA
AACGTTATTCTTTGAACCAGAAGGGGAAGGGTTTAGTTTGCCGTCAGATTCTCCCGCTCTGCATGTCATCCAGCATATTC
GCGATGAATCGCACGATCACGCCATTGGCGGGCATCGTAAAAAACGGGCCAAAGTCAAAAACACCAGTACCCTGGAAACG
ATCGAAGGTGTCGGTCCTAAGCGCCGTCAAATGCTGTTGAAATATATGGGCGGTTTGCAAGGATTACGTAACGCAAGTGT
CGAGGAAATTGCAAAAGTGCCGGGTATTTCGCAAGGTCTGGCAGAAAAGATCTTCTGGTCGTTGAAACATTGA

Upstream 100 bases:

>100_bases
GCTACCGTATGTTCAGTAAACTAAACATTCACGGTGATGTTGAACTGACCCACCTGGCGATTCGCCATGGCCTGTGTAAT
GCGGAGACATTATCAAGCCA

Downstream 100 bases:

>100_bases
GTCCGCTGTAGCAACATAGGGGTAATTTCTCTGACAACAGATAGTTACCCGTCATTATGCAATTTAATATCCCTACGTTG
CTCACGCTGTTTCGCGTCAT

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: Protein uvrC; Excinuclease ABC subunit C [H]

Number of amino acids: Translated: 610; Mature: 609

Protein sequence:

>610_residues
MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLL
EHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYR
NRSRPCLQYQIGRCLGPCVAGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLIARMEKASQNLEFEEAARIRDQIQAVRRVT
EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFVGQFYLQGSQMRTLPGEILLD
FNLSDKTLLADSLTELAGRRINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLSALATVLKLPEVKRMECFDI
SHTMGEQTVASCVVFDANGPLRSEYRRYNITGITPGDDYAAMNQVLRRRYGKAIEESKIPDVILIDGGKGQLAQAKAVFA
ELDVPWDKNRPLLLGVAKGADRKAGLETLFFEPEGEGFSLPSDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSTLET
IEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH

Sequences:

>Translated_610_residues
MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLL
EHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYR
NRSRPCLQYQIGRCLGPCVAGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLIARMEKASQNLEFEEAARIRDQIQAVRRVT
EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFVGQFYLQGSQMRTLPGEILLD
FNLSDKTLLADSLTELAGRRINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLSALATVLKLPEVKRMECFDI
SHTMGEQTVASCVVFDANGPLRSEYRRYNITGITPGDDYAAMNQVLRRRYGKAIEESKIPDVILIDGGKGQLAQAKAVFA
ELDVPWDKNRPLLLGVAKGADRKAGLETLFFEPEGEGFSLPSDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSTLET
IEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH
>Mature_609_residues
SDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLE
HNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRN
RSRPCLQYQIGRCLGPCVAGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLIARMEKASQNLEFEEAARIRDQIQAVRRVTE
KQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFVGQFYLQGSQMRTLPGEILLDF
NLSDKTLLADSLTELAGRRINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLSALATVLKLPEVKRMECFDIS
HTMGEQTVASCVVFDANGPLRSEYRRYNITGITPGDDYAAMNQVLRRRYGKAIEESKIPDVILIDGGKGQLAQAKAVFAE
LDVPWDKNRPLLLGVAKGADRKAGLETLFFEPEGEGFSLPSDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSTLETI
EGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH

Specific function: The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision [H]

COG id: COG0322

COG function: function code L; Nuclease subunit of the excinuclease complex

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 UVR domain [H]

Homologues:

Organism=Escherichia coli, GI87081999, Length=610, Percent_Identity=97.3770491803279, Blast_Score=1234, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR001943
- InterPro:   IPR009055
- InterPro:   IPR004791
- InterPro:   IPR001162
- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG; PF00633 HHH; PF02151 UVR; PF08459 UvrC_HhH_N [H]

EC number: NA

Molecular weight: Translated: 68188; Mature: 68057

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50151 UVR ; PS50164 UVRC_1 ; PS50165 UVRC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV
CCCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
AQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRG
HHHHHHEEEEEECCCEEEEEECCEEEEECCCCCEEEECCCCCCEEEECCCCCCHHHHHCC
AKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GLVSEEEYAQQVEYVRLFLSGKDDQVLTQLIARMEKASQNLEFEEAARIRDQIQAVRRVT
HHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFV
HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHH
GQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLTELAGRRINVQTKPRGDRARYLKLART
HHHHCCCCCEECCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
NAATALTSKLSQQSTVHQRLSALATVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHCHHHHEEEEEECCCCC
LRSEYRRYNITGITPGDDYAAMNQVLRRRYGKAIEESKIPDVILIDGGKGQLAQAKAVFA
HHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCHHHHHHHHH
ELDVPWDKNRPLLLGVAKGADRKAGLETLFFEPEGEGFSLPSDSPALHVIQHIRDESHDH
HCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCC
AIGGHRKKRAKVKNTSTLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGL
CCCCCHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHH
AEKIFWSLKH
HHHHHHHCCC
>Mature Secondary Structure 
SDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV
CCCHHHHHHHHHHHCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH
AQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRG
HHHHHHEEEEEECCCEEEEEECCEEEEECCCCCEEEECCCCCCEEEECCCCCCHHHHHCC
AKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
GLVSEEEYAQQVEYVRLFLSGKDDQVLTQLIARMEKASQNLEFEEAARIRDQIQAVRRVT
HHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFV
HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCHHHHHHHHHH
GQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLTELAGRRINVQTKPRGDRARYLKLART
HHHHCCCCCEECCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHH
NAATALTSKLSQQSTVHQRLSALATVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHCHHHHEEEEEECCCCC
LRSEYRRYNITGITPGDDYAAMNQVLRRRYGKAIEESKIPDVILIDGGKGQLAQAKAVFA
HHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCHHHHHHHHH
ELDVPWDKNRPLLLGVAKGADRKAGLETLFFEPEGEGFSLPSDSPALHVIQHIRDESHDH
HCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCC
AIGGHRKKRAKVKNTSTLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGL
CCCCCHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHH
AEKIFWSLKH
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA