Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is talA [H]
Identifier: 218548103
GI number: 218548103
Start: 734529
End: 735479
Strand: Reverse
Name: talA [H]
Synonym: EFER_0715
Alternate gene names: 218548103
Gene position: 735479-734529 (Counterclockwise)
Preceding gene: 218548122
Following gene: 218548102
Centisome position: 16.03
GC content: 49.84
Gene sequence:
>951_bases ATGAACGAGTTAGACGGCATCAAACAGTTCACCACCGTTGTGGCAGACAGTGGCGACATCGAATCTATTCGTCATTATCA ACCCCAGGATGCCACCACAAATCCATCACTATTACTGAAAGCTGCCGCATTAGAGCAATATGGTCACTTAATTGCTGATG CCATCGCATGGGGTAAGAAAAACGGTAAAACCCAGGAACAGCAGGTCGTTGCTGCCTGCGACAAACTGGCGGTTAATTTT GGTACAGAGATTCTGAAAATTGTCCCCGGACGTGTATCAACTGAAGTTGACGCCCGACTTTCTTTCGATAAAGAAAAAAG TATGCAAAAAGCCCGTCATCTGGTGGAACTCTATCAGCAGCAGGGCGTGGATAAATCGCGGATTCTGATCAAACTTGCCG CCACATGGGAAGGAATTCGGGCCGCAGAAGAACTGGAAAAAGAAGGGATTAACTGCAACCTGACACTGCTGTTCTCCTTC GCGCAAGCCCGCGCCTGTGCCGAAGCTGGCGTATTTTTGATTTCACCTTTTGTCGGGCGAATCTATGACTGGTATCAGGC ACGCAATCCGATGGCCCCGTATGTCGTGGAAGAAGATCCGGGTGTTAAATCGGTGCGCAATATCTACGACTACTACAAGC AGCATCGCTACGACACGATAGTAATGGGTGCCAGCTTCCGTCGTACTGAGCAAATCCTTGCTCTGACAGGATGTGATCGC CTGACCATCGCCCCGAATCTGCTAAAAGAGTTGCAGGAAAAGGTGTCGCCAGTGGTACGCAAGCTGATCCCGGCATCACA AGCTCTCCCCCGTCCAGTGCCAATGACAGAAGCGGAATTCCGCTGGGAACACAATCAGGATGCCATGGCAGTAGAAAAAC TTTCTGAGGGTATCCGTCTGTTTGCCGTTGACCAACGAAAACTGGAAGACCTGCTTGCCGCTAAATTCTAA
Upstream 100 bases:
>100_bases CATGCCTGTCTGCTATGCTTTTTTGATGTGTTTACCTGATTTTCTCAGAAGTGTGAGCTAAAGCACTCATCTAAGACTTT ACTTTTCAAGGAGTATTTCC
Downstream 100 bases:
>100_bases AAAACCAGCCACGGAGTGTTTTATGTCCCGAAAAGACCTTGCCAATGCGATTCGCGCACTCAGTATGGATGCGGTGCAAA AAGCCAATTCCGGTCATCCC
Product: transaldolase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MNELDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAALEQYGHLIADAIAWGKKNGKTQEQQVVAACDKLAVNF GTEILKIVPGRVSTEVDARLSFDKEKSMQKARHLVELYQQQGVDKSRILIKLAATWEGIRAAEELEKEGINCNLTLLFSF AQARACAEAGVFLISPFVGRIYDWYQARNPMAPYVVEEDPGVKSVRNIYDYYKQHRYDTIVMGASFRRTEQILALTGCDR LTIAPNLLKELQEKVSPVVRKLIPASQALPRPVPMTEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKF
Sequences:
>Translated_316_residues MNELDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAALEQYGHLIADAIAWGKKNGKTQEQQVVAACDKLAVNF GTEILKIVPGRVSTEVDARLSFDKEKSMQKARHLVELYQQQGVDKSRILIKLAATWEGIRAAEELEKEGINCNLTLLFSF AQARACAEAGVFLISPFVGRIYDWYQARNPMAPYVVEEDPGVKSVRNIYDYYKQHRYDTIVMGASFRRTEQILALTGCDR LTIAPNLLKELQEKVSPVVRKLIPASQALPRPVPMTEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKF >Mature_316_residues MNELDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAALEQYGHLIADAIAWGKKNGKTQEQQVVAACDKLAVNF GTEILKIVPGRVSTEVDARLSFDKEKSMQKARHLVELYQQQGVDKSRILIKLAATWEGIRAAEELEKEGINCNLTLLFSF AQARACAEAGVFLISPFVGRIYDWYQARNPMAPYVVEEDPGVKSVRNIYDYYKQHRYDTIVMGASFRRTEQILALTGCDR LTIAPNLLKELQEKVSPVVRKLIPASQALPRPVPMTEAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKF
Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]
COG id: COG0176
COG function: function code G; Transaldolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transaldolase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI5803187, Length=317, Percent_Identity=59.3059936908517, Blast_Score=368, Evalue=1e-102, Organism=Escherichia coli, GI1788807, Length=316, Percent_Identity=93.3544303797468, Blast_Score=615, Evalue=1e-177, Organism=Escherichia coli, GI1786189, Length=312, Percent_Identity=63.4615384615385, Blast_Score=417, Evalue=1e-118, Organism=Caenorhabditis elegans, GI25153750, Length=322, Percent_Identity=54.0372670807453, Blast_Score=337, Evalue=4e-93, Organism=Caenorhabditis elegans, GI25153752, Length=168, Percent_Identity=54.1666666666667, Blast_Score=170, Evalue=8e-43, Organism=Caenorhabditis elegans, GI17570473, Length=101, Percent_Identity=52.4752475247525, Blast_Score=88, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6321480, Length=314, Percent_Identity=53.8216560509554, Blast_Score=328, Evalue=5e-91, Organism=Saccharomyces cerevisiae, GI6323386, Length=320, Percent_Identity=57.1875, Blast_Score=327, Evalue=2e-90, Organism=Drosophila melanogaster, GI45549185, Length=315, Percent_Identity=58.0952380952381, Blast_Score=362, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001585 - InterPro: IPR004730 - InterPro: IPR018225 [H]
Pfam domain/function: PF00923 Transaldolase [H]
EC number: =2.2.1.2 [H]
Molecular weight: Translated: 35554; Mature: 35554
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAALEQYGHLIADAIAWGKK CCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC NGKTQEQQVVAACDKLAVNFGTEILKIVPGRVSTEVDARLSFDKEKSMQKARHLVELYQQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH QGVDKSRILIKLAATWEGIRAAEELEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGR HCCCHHHEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH IYDWYQARNPMAPYVVEEDPGVKSVRNIYDYYKQHRYDTIVMGASFRRTEQILALTGCDR HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHEECCCC LTIAPNLLKELQEKVSPVVRKLIPASQALPRPVPMTEAEFRWEHNQDAMAVEKLSEGIRL EEECHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCEE FAVDQRKLEDLLAAKF EEECHHHHHHHHHCCC >Mature Secondary Structure MNELDGIKQFTTVVADSGDIESIRHYQPQDATTNPSLLLKAAALEQYGHLIADAIAWGKK CCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC NGKTQEQQVVAACDKLAVNFGTEILKIVPGRVSTEVDARLSFDKEKSMQKARHLVELYQQ CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHH QGVDKSRILIKLAATWEGIRAAEELEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGR HCCCHHHEEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH IYDWYQARNPMAPYVVEEDPGVKSVRNIYDYYKQHRYDTIVMGASFRRTEQILALTGCDR HHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHEECCCC LTIAPNLLKELQEKVSPVVRKLIPASQALPRPVPMTEAEFRWEHNQDAMAVEKLSEGIRL EEECHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHCCCEE FAVDQRKLEDLLAAKF EEECHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA