Definition | Escherichia fergusonii ATCC 35469 chromosome, complete genome. |
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Accession | NC_011740 |
Length | 4,588,711 |
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The map label for this gene is ypfK [H]
Identifier: 218548122
GI number: 218548122
Start: 753190
End: 753582
Strand: Reverse
Name: ypfK [H]
Synonym: EFER_0734
Alternate gene names: 218548122
Gene position: 753582-753190 (Counterclockwise)
Preceding gene: 218548123
Following gene: 218548103
Centisome position: 16.42
GC content: 40.71
Gene sequence:
>393_bases GTGCCAGACAACAGCGACGTCTTATCAGCAGTCGTAGGAATTATTTATCGCGAGCGACAAAGGGAGCGATTAAAAATGTC AGACACATCACATAAAGAAAGTAAATGGCACCCTCATCTGGATATGAGTTTTCTGGGATGCGTGCTGGCATTTGCTATGG AAGTTTATTTTGAAGAACACATTTTTATTCCCCACGGTGGAGGAGCAAGTTTTGGATTGATAGCACTCATCGTTATTAAT TTTATGACTATCCCGGTAGTGATCGTGGTAACAACACTAATTTGCTATTTATTTGAAATTTCGCGAAAGCGCGTAAATTG TATGTTGGTATTCCTGCTGGCGTGTATTTTGACAATTGTCGGTTTGTTTATCGCCTATCCCGTTGGGCAATAA
Upstream 100 bases:
>100_bases GCCCGGAATGCTCCCGCTCAATGACGTTTCTTGCGCAACTGGATTATGCCGATATTGAACAATACGGCGAAGGGATAATT TACACGTTCATCTGTCCAGA
Downstream 100 bases:
>100_bases AATACATAGCAATTCAACGTAATTTGTAACTTCACTATGGACCGGATCAAACACCATCCTCATCCGGCCCTCACCCTCAC TCCAGTTCCTGCATCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MPDNSDVLSAVVGIIYRERQRERLKMSDTSHKESKWHPHLDMSFLGCVLAFAMEVYFEEHIFIPHGGGASFGLIALIVIN FMTIPVVIVVTTLICYLFEISRKRVNCMLVFLLACILTIVGLFIAYPVGQ
Sequences:
>Translated_130_residues MPDNSDVLSAVVGIIYRERQRERLKMSDTSHKESKWHPHLDMSFLGCVLAFAMEVYFEEHIFIPHGGGASFGLIALIVIN FMTIPVVIVVTTLICYLFEISRKRVNCMLVFLLACILTIVGLFIAYPVGQ >Mature_129_residues PDNSDVLSAVVGIIYRERQRERLKMSDTSHKESKWHPHLDMSFLGCVLAFAMEVYFEEHIFIPHGGGASFGLIALIVINF MTIPVVIVVTTLICYLFEISRKRVNCMLVFLLACILTIVGLFIAYPVGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14678; Mature: 14547
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDNSDVLSAVVGIIYRERQRERLKMSDTSHKESKWHPHLDMSFLGCVLAFAMEVYFEEH CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC IFIPHGGGASFGLIALIVINFMTIPVVIVVTTLICYLFEISRKRVNCMLVFLLACILTIV EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFIAYPVGQ HHHHHCCCCC >Mature Secondary Structure PDNSDVLSAVVGIIYRERQRERLKMSDTSHKESKWHPHLDMSFLGCVLAFAMEVYFEEH CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC IFIPHGGGASFGLIALIVINFMTIPVVIVVTTLICYLFEISRKRVNCMLVFLLACILTIV EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLFIAYPVGQ HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8349542; 11677609; 10464203 [H]