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The map label for this gene is hyfJ [H]

Identifier: 218548076

GI number: 218548076

Start: 702312

End: 702740

Strand: Reverse

Name: hyfJ [H]

Synonym: EFER_0685

Alternate gene names: 218548076

Gene position: 702740-702312 (Counterclockwise)

Preceding gene: 218548077

Following gene: 218548075

Centisome position: 15.31

GC content: 49.65

Gene sequence:

>429_bases
ATGGCTGATATCAGCGACGAGATCGTCTTCTGGACACTGCGACAGAAGTTTGTCGACAGCGGTACAGCAATGCCAGAGAA
GAGTTCACAAGTGATGTACTACTCACTGGCAATTGGGCATCACGTTGGTGTGATTGACTGTCTGCGGGTGGCACTGCGCT
GCCCGCTGGCTGAGTACCATCAGTGGATTGCATCACTTGAAGATGAACAGGCCCAGCGCAAAATGCAGGGGGTCGTAACC
TTTGGTGAAATTATCATTGATAGCACTCACATTAGCCTTTTGGCAAAGGCGTTTACGCCACTTACAAAGAATGCAGAATC
ACCGTGGAAGCGACTGAGTGACCAGATGATGAAGCTTCTGGACGATATCGCCCATGAGCCAGCGATCTATTTGCTGGCAA
GGAAAATAACAGGATCAGGGATACGATGA

Upstream 100 bases:

>100_bases
GATCCCAGTGGGCAACAACTGGCGCACTGGTTAGAACAAGAGAGCGATCCACGTCTTAATCAGATTGTTGATCGTCTGTT
GGTGATACTTCGGGGGACTA

Downstream 100 bases:

>100_bases
CAAAATTTGACGAGGCGATGCTCGCCCCGCCGGAAGATAACATGATGGCAGAAACGATCAGTGGCTTGTTACAGCGTCTG
ACGCCGCAAAGTGGCAAAGA

Product: processing element hydrogenase 4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MADISDEIVFWTLRQKFVDSGTAMPEKSSQVMYYSLAIGHHVGVIDCLRVALRCPLAEYHQWIASLEDEQAQRKMQGVVT
FGEIIIDSTHISLLAKAFTPLTKNAESPWKRLSDQMMKLLDDIAHEPAIYLLARKITGSGIR

Sequences:

>Translated_142_residues
MADISDEIVFWTLRQKFVDSGTAMPEKSSQVMYYSLAIGHHVGVIDCLRVALRCPLAEYHQWIASLEDEQAQRKMQGVVT
FGEIIIDSTHISLLAKAFTPLTKNAESPWKRLSDQMMKLLDDIAHEPAIYLLARKITGSGIR
>Mature_141_residues
ADISDEIVFWTLRQKFVDSGTAMPEKSSQVMYYSLAIGHHVGVIDCLRVALRCPLAEYHQWIASLEDEQAQRKMQGVVTF
GEIIIDSTHISLLAKAFTPLTKNAESPWKRLSDQMMKLLDDIAHEPAIYLLARKITGSGIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli hycH [H]

Homologues:

Organism=Escherichia coli, GI87082116, Length=136, Percent_Identity=65.4411764705882, Blast_Score=190, Evalue=3e-50,
Organism=Escherichia coli, GI1789073, Length=134, Percent_Identity=47.7611940298507, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010005
- ProDom:   PD021295 [H]

Pfam domain/function: PF07450 HycH [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 16019; Mature: 15888

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADISDEIVFWTLRQKFVDSGTAMPEKSSQVMYYSLAIGHHVGVIDCLRVALRCPLAEYH
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHCCHHHHH
QWIASLEDEQAQRKMQGVVTFGEIIIDSTHISLLAKAFTPLTKNAESPWKRLSDQMMKLL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DDIAHEPAIYLLARKITGSGIR
HHHCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ADISDEIVFWTLRQKFVDSGTAMPEKSSQVMYYSLAIGHHVGVIDCLRVALRCPLAEYH
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHCCHHHHH
QWIASLEDEQAQRKMQGVVTFGEIIIDSTHISLLAKAFTPLTKNAESPWKRLSDQMMKLL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
DDIAHEPAIYLLARKITGSGIR
HHHCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]