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The map label for this gene is ychE [C]

Identifier: 21672537

GI number: 21672537

Start: 294273

End: 294908

Strand: Direct

Name: ychE [C]

Synonym: BUsg257

Alternate gene names: 21672537

Gene position: 294273-294908 (Clockwise)

Preceding gene: 21672536

Following gene: 30410818

Centisome position: 45.88

GC content: 26.89

Gene sequence:

>636_bases
ATGCATATTTCAATGTTTGATTTTTCTATATATATAAAATTTTTTGTAAGTTTATGTGCTTTAGTGAATCCAATTGGAAT
GATTCCTATATTTACAACTATGACTAATCATCAATCTCATTTAGAACGAAAAAAAACTAATTTAGTTGCTAATTTTTCTG
CTTTTATAATTTTATTAATATCTCTTTTTGCAGGTAATAGTATTTTAAACGCTTTTGGCATATCTATTAATTCATTTCGT
ATTGCAGGAGGAATACTAATTATTAGTATTGCTTTTTCTATGATTAGTGGAAAATTTACAAAAAATAATAAAACAAGTAA
AGAAAAAAATCAAGAAAATATAAGTGTTGTACCGTTAGCTATGCCATTAATTGCAGGACCGGGAGCAATCAGTTCAACTA
TTGTTTGGAGTACGTATTATTCTACTTGGTCTGATTTTTTAGGTTGTAGTATAGCTATTTTTTTATTTGCTTTTGTTTGT
TGGTTATGTTTTCGAGCCGCTCCATGTGTAGTTGAAATATTAGGAAAAACAGGTATTAATATTATTACACGTATTATGGG
TTTGTTACTGATGTCTTTAGGAATCGAATTCCTTAGTATTGGAATAAAATCTATTTTTTCTGCATTACTACATTAA

Upstream 100 bases:

>100_bases
GCAAACACGTAGTATTATTGCTCGAATTGATCATTAAATATTATCATTTTTAATGATTTCAATATAATTGTAAAAATTCA
ATATAAATTAAGAGTATAAT

Downstream 100 bases:

>100_bases
TAATTTATCAAAATTAGTATTTTCGTTAAGTGTAGATTAAATATAGTATCGATCAAATATAAAATTGGATTTTTCTCATT
GAATAATAGAATTATTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MHISMFDFSIYIKFFVSLCALVNPIGMIPIFTTMTNHQSHLERKKTNLVANFSAFIILLISLFAGNSILNAFGISINSFR
IAGGILIISIAFSMISGKFTKNNKTSKEKNQENISVVPLAMPLIAGPGAISSTIVWSTYYSTWSDFLGCSIAIFLFAFVC
WLCFRAAPCVVEILGKTGINIITRIMGLLLMSLGIEFLSIGIKSIFSALLH

Sequences:

>Translated_211_residues
MHISMFDFSIYIKFFVSLCALVNPIGMIPIFTTMTNHQSHLERKKTNLVANFSAFIILLISLFAGNSILNAFGISINSFR
IAGGILIISIAFSMISGKFTKNNKTSKEKNQENISVVPLAMPLIAGPGAISSTIVWSTYYSTWSDFLGCSIAIFLFAFVC
WLCFRAAPCVVEILGKTGINIITRIMGLLLMSLGIEFLSIGIKSIFSALLH
>Mature_211_residues
MHISMFDFSIYIKFFVSLCALVNPIGMIPIFTTMTNHQSHLERKKTNLVANFSAFIILLISLFAGNSILNAFGISINSFR
IAGGILIISIAFSMISGKFTKNNKTSKEKNQENISVVPLAMPLIAGPGAISSTIVWSTYYSTWSDFLGCSIAIFLFAFVC
WLCFRAAPCVVEILGKTGINIITRIMGLLLMSLGIEFLSIGIKSIFSALLH

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family

Homologues:

Organism=Escherichia coli, GI1787494, Length=212, Percent_Identity=59.4339622641509, Blast_Score=249, Evalue=1e-67,
Organism=Escherichia coli, GI1787809, Length=197, Percent_Identity=32.48730964467, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1789842, Length=188, Percent_Identity=28.7234042553192, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y257_BUCAP (Q8K9Q4)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660604.1
- EnsemblBacteria:   EBBUCT00000000185
- GeneID:   1005459
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg257
- GeneTree:   EBGT00050000007693
- HOGENOM:   HBG731519
- OMA:   INIGTRL
- ProtClustDB:   PRK11111
- BioCyc:   BAPH198804:BUSG257-MONOMER
- InterPro:   IPR002771
- TIGRFAMs:   TIGR00427

Pfam domain/function: PF01914 MarC

EC number: NA

Molecular weight: Translated: 23150; Mature: 23150

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbb62784)-; HASH(0xae48740)-; HASH(0xb6f4628)-; HASH(0xb947bf0)-; HASH(0x9653204)-; HASH(0xba83ec8)-;

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHISMFDFSIYIKFFVSLCALVNPIGMIPIFTTMTNHQSHLERKKTNLVANFSAFIILLI
CEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SLFAGNSILNAFGISINSFRIAGGILIISIAFSMISGKFTKNNKTSKEKNQENISVVPLA
HHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHH
MPLIAGPGAISSTIVWSTYYSTWSDFLGCSIAIFLFAFVCWLCFRAAPCVVEILGKTGIN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH
IITRIMGLLLMSLGIEFLSIGIKSIFSALLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MHISMFDFSIYIKFFVSLCALVNPIGMIPIFTTMTNHQSHLERKKTNLVANFSAFIILLI
CEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SLFAGNSILNAFGISINSFRIAGGILIISIAFSMISGKFTKNNKTSKEKNQENISVVPLA
HHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEHH
MPLIAGPGAISSTIVWSTYYSTWSDFLGCSIAIFLFAFVCWLCFRAAPCVVEILGKTGIN
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH
IITRIMGLLLMSLGIEFLSIGIKSIFSALLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438