Definition Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome.
Accession NC_004061
Length 641,454

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The map label for this gene is tal

Identifier: 21672377

GI number: 21672377

Start: 96082

End: 97032

Strand: Direct

Name: tal

Synonym: BUsg085

Alternate gene names: 21672377

Gene position: 96082-97032 (Clockwise)

Preceding gene: 21672376

Following gene: 21672378

Centisome position: 14.98

GC content: 27.97

Gene sequence:

>951_bases
ATGAATCAACTAAATGCGTTAAAACAATTTACGACAATTGTTGCAGATACAAGTGATATAGAGTCGATTTGTAAATATAA
ACCACAAGATGCAACTACTAATCCATCTTTAATACTTAAAGCTGTCAGTTCAAGTGTTAACAAAAGATTTATTGATCAAG
CAATAGAATATGCTAGAAAAAAAGGTGGTTCTTACAATTATAAGATAGTAAATGCTAGTGATAAAATTTTAGTTGATCTT
GGAGTAGAAATTTTAAAACATATACCAGGTTATATTTCTAGTGAAGTTGATGCTCGTTTGTCTTTTAATAAAGAAAAATG
TATTTTAAAAGCAAAAAAAATAATTGATATGTATGAAGAAAAAGGTATTTCTAGAAATAGAGTATTAATTAAACTAGCGG
CTACTTGGGAATGCATAAAAGCAGCAGAAGAGCTTAAAAAAAATAATATTGCTTGTAATTTAACTCTTTTATTTTCTTTT
GCTCAAGCTCGTGCTTGTGCAGAATCAAATGTATTTTTAATATCTCCCTTTGTTGGCCGTATTTACGATTGGTATCTATC
TCAAAATTTAATATTAAAAAATCCTGCTGATCAGGATCCAGGTGTCTTATCTGTTTGTAAAATTTATGATTTTTATAAAA
AATATAATTACAAAACTATAATTATGGGCGCAAGTTTTCGTAATGTTCAACAAATTTTATCTCTTTCAGGATGCGATCGA
TTGACTATTTCACCTGTATTATTAAAAGAGTTGGAATCTAGTAATAAAGAATTAAATAGAAAATTATGTCCTCCTACTTC
ATTTTTAAATCCACCTGTGCCTCTTACTGAAGCGGAATTTAGATGGGAACATAATCAGGATGAAATGGCTGTTCAAAAAT
TATCAGAAGGTATAAGAAATTTTGGAAAAGATCAATTAAGTTTGGAGAAAATTTTTTCTAAACTAATATAA

Upstream 100 bases:

>100_bases
TATTTAATATTGTTAAGTAAAATACGTTTTTTTTACATATAATTTTAATCTTTGATTTGCTAATTTTATTTCTTAATTTT
TTAATAAAAAGGACAAAACA

Downstream 100 bases:

>100_bases
ATGTTGAATAAGATATTAATTTTTTTAAGTATAAATTTGGAGAAATATTTATGTGTGTAAGAAGAGAATTAGCAAACGCA
ATTCGTATGTTGAGTATAGA

Product: transaldolase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNQLNALKQFTTIVADTSDIESICKYKPQDATTNPSLILKAVSSSVNKRFIDQAIEYARKKGGSYNYKIVNASDKILVDL
GVEILKHIPGYISSEVDARLSFNKEKCILKAKKIIDMYEEKGISRNRVLIKLAATWECIKAAEELKKNNIACNLTLLFSF
AQARACAESNVFLISPFVGRIYDWYLSQNLILKNPADQDPGVLSVCKIYDFYKKYNYKTIIMGASFRNVQQILSLSGCDR
LTISPVLLKELESSNKELNRKLCPPTSFLNPPVPLTEAEFRWEHNQDEMAVQKLSEGIRNFGKDQLSLEKIFSKLI

Sequences:

>Translated_316_residues
MNQLNALKQFTTIVADTSDIESICKYKPQDATTNPSLILKAVSSSVNKRFIDQAIEYARKKGGSYNYKIVNASDKILVDL
GVEILKHIPGYISSEVDARLSFNKEKCILKAKKIIDMYEEKGISRNRVLIKLAATWECIKAAEELKKNNIACNLTLLFSF
AQARACAESNVFLISPFVGRIYDWYLSQNLILKNPADQDPGVLSVCKIYDFYKKYNYKTIIMGASFRNVQQILSLSGCDR
LTISPVLLKELESSNKELNRKLCPPTSFLNPPVPLTEAEFRWEHNQDEMAVQKLSEGIRNFGKDQLSLEKIFSKLI
>Mature_316_residues
MNQLNALKQFTTIVADTSDIESICKYKPQDATTNPSLILKAVSSSVNKRFIDQAIEYARKKGGSYNYKIVNASDKILVDL
GVEILKHIPGYISSEVDARLSFNKEKCILKAKKIIDMYEEKGISRNRVLIKLAATWECIKAAEELKKNNIACNLTLLFSF
AQARACAESNVFLISPFVGRIYDWYLSQNLILKNPADQDPGVLSVCKIYDFYKKYNYKTIIMGASFRNVQQILSLSGCDR
LTISPVLLKELESSNKELNRKLCPPTSFLNPPVPLTEAEFRWEHNQDEMAVQKLSEGIRNFGKDQLSLEKIFSKLI

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 1 subfamily

Homologues:

Organism=Homo sapiens, GI5803187, Length=314, Percent_Identity=53.5031847133758, Blast_Score=342, Evalue=4e-94,
Organism=Escherichia coli, GI1788807, Length=313, Percent_Identity=59.4249201277955, Blast_Score=400, Evalue=1e-113,
Organism=Escherichia coli, GI1786189, Length=315, Percent_Identity=54.6031746031746, Blast_Score=365, Evalue=1e-102,
Organism=Caenorhabditis elegans, GI25153750, Length=319, Percent_Identity=49.2163009404389, Blast_Score=301, Evalue=2e-82,
Organism=Caenorhabditis elegans, GI25153752, Length=165, Percent_Identity=51.5151515151515, Blast_Score=164, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI17570473, Length=97, Percent_Identity=46.3917525773196, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6321480, Length=315, Percent_Identity=50.4761904761905, Blast_Score=296, Evalue=2e-81,
Organism=Saccharomyces cerevisiae, GI6323386, Length=321, Percent_Identity=50.4672897196262, Blast_Score=287, Evalue=2e-78,
Organism=Drosophila melanogaster, GI45549185, Length=315, Percent_Identity=52.6984126984127, Blast_Score=325, Evalue=3e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TAL_BUCAP (Q8KA27)

Other databases:

- EMBL:   AE013218
- RefSeq:   NP_660444.1
- ProteinModelPortal:   Q8KA27
- SMR:   Q8KA27
- EnsemblBacteria:   EBBUCT00000000340
- GeneID:   1005902
- GenomeReviews:   AE013218_GR
- KEGG:   bas:BUsg085
- GeneTree:   EBGT00050000007734
- HOGENOM:   HBG286747
- OMA:   LINASDR
- ProtClustDB:   PRK05269
- BioCyc:   BAPH198804:BUSG085-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00492
- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004730
- InterPro:   IPR018225
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR10683
- PANTHER:   PTHR10683:SF3
- TIGRFAMs:   TIGR00874

Pfam domain/function: PF00923 Transaldolase

EC number: =2.2.1.2

Molecular weight: Translated: 35826; Mature: 35826

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS01054 TRANSALDOLASE_1; PS00958 TRANSALDOLASE_2

Important sites: ACT_SITE 131-131

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQLNALKQFTTIVADTSDIESICKYKPQDATTNPSLILKAVSSSVNKRFIDQAIEYARK
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KGGSYNYKIVNASDKILVDLGVEILKHIPGYISSEVDARLSFNKEKCILKAKKIIDMYEE
CCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHHH
KGISRNRVLIKLAATWECIKAAEELKKNNIACNLTLLFSFAQARACAESNVFLISPFVGR
CCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEECHHHHH
IYDWYLSQNLILKNPADQDPGVLSVCKIYDFYKKYNYKTIIMGASFRNVQQILSLSGCDR
HHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCC
LTISPVLLKELESSNKELNRKLCPPTSFLNPPVPLTEAEFRWEHNQDEMAVQKLSEGIRN
CEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHH
FGKDQLSLEKIFSKLI
HCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNQLNALKQFTTIVADTSDIESICKYKPQDATTNPSLILKAVSSSVNKRFIDQAIEYARK
CCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KGGSYNYKIVNASDKILVDLGVEILKHIPGYISSEVDARLSFNKEKCILKAKKIIDMYEE
CCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHHH
KGISRNRVLIKLAATWECIKAAEELKKNNIACNLTLLFSFAQARACAESNVFLISPFVGR
CCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCEEEECHHHHH
IYDWYLSQNLILKNPADQDPGVLSVCKIYDFYKKYNYKTIIMGASFRNVQQILSLSGCDR
HHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCC
LTISPVLLKELESSNKELNRKLCPPTSFLNPPVPLTEAEFRWEHNQDEMAVQKLSEGIRN
CEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHH
FGKDQLSLEKIFSKLI
HCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12089438