Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is ygjT [H]
Identifier: 21245077
GI number: 21245077
Start: 5161597
End: 5162553
Strand: Direct
Name: ygjT [H]
Synonym: XAC4365
Alternate gene names: 21245077
Gene position: 5161597-5162553 (Clockwise)
Preceding gene: 21245066
Following gene: 77748778
Centisome position: 99.73
GC content: 63.01
Gene sequence:
>957_bases ATGCAAACCATTGGCAACGTCTGGTTATGGGGTGGCTTCGCGGTGGTGGTGATCGCCGCGCTGCTGATCGATCTGGTGCT GATGCGCCACGGCGGCGCCCACAAGGTCACCTTCAAGGAAGCCACCTGGTGGAGCATCGGTTGGGTGCTGCTGGCGCTGG CCTTCAATGCCGGGCTGTGGTGGTACCTGCAAGGCAGCGTCGGCGACGCCCAGGCCGACCAGATCGGGCTGCAGTTCCTC ACCGGCTACCTGGTCGAGAAATCCCTGGCGGTCGACAACATCTTCGTCTTCCTGATGGTGATGACGTATTTCGGCGTGCC CGAAGAACAGCGCCAGCGCGTGCTGATCATCGGTGTGCTGGGTGCCATCGTGCTGCGTGCGATCATGATCTTCGCCGGCT CGATGTTGCTGGCCAAGTTCCATTGGCTGCTCTACGTGTTCGGCGCGTTCCTGTTGCTGACCGGCGTCAAGATGTGGTTC TCCGCCGGCAAGGAGCCGGATCTGGAAGCCAACCCGGTGCTGCGCTGGATGCGCGGGCACCTGCGCCTGAGCCCGCAGTA CCACGGCAACCTGCTCAGCGTGATCAAGGACGGCAAGCGCTGGTTCACGCCGCTGTTCGTGGTGCTGATCTTGATCGCGG TGATCGATGTGATCTTCGCGGTGGACAGCATCCCGGCGATCTTCGCCATCACCACCGACCCGTTCATCGTGCTCACCTCC AATGTGTTCGCGGTGCTGGGCCTGCGCGCGATGTTCTTCCTGCTGGCCGGCATGGCCGACCGCTTCCACCTGTTGCCGTA TGGCCTGGCGGTGATCCTGGTGTTCATCGGCACCAAGATGATGATCATCGATCTGTACAAGATCCCGGTGCTGGTGTCGC TGGGCGTGGTGGTCGCCATCCTGGTCGCCACCATCGTGCTGAGCCTGCTGCGCCCGCCCAAGCCTGCCGGGCACTGA
Upstream 100 bases:
>100_bases CCGCGCAGGCGAAGGTCCGTCACCCGGAATCCACGATTTCCGTGTCACAAGGCCTCAGCCCGCCGGCTGTCCAGGCCGCT TTCACTTTTTCGGGATTCTT
Downstream 100 bases:
>100_bases CGGGCCGGGGATTGGGAATCGTGGCGCAGCCTGCACTGCTGGCGACCATGCGCACCGACCATCTCGACAGGCCCTTGCCC GCCCACCGTCGCGGGACCTT
Product: export protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MQTIGNVWLWGGFAVVVIAALLIDLVLMRHGGAHKVTFKEATWWSIGWVLLALAFNAGLWWYLQGSVGDAQADQIGLQFL TGYLVEKSLAVDNIFVFLMVMTYFGVPEEQRQRVLIIGVLGAIVLRAIMIFAGSMLLAKFHWLLYVFGAFLLLTGVKMWF SAGKEPDLEANPVLRWMRGHLRLSPQYHGNLLSVIKDGKRWFTPLFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILVFIGTKMMIIDLYKIPVLVSLGVVVAILVATIVLSLLRPPKPAGH
Sequences:
>Translated_318_residues MQTIGNVWLWGGFAVVVIAALLIDLVLMRHGGAHKVTFKEATWWSIGWVLLALAFNAGLWWYLQGSVGDAQADQIGLQFL TGYLVEKSLAVDNIFVFLMVMTYFGVPEEQRQRVLIIGVLGAIVLRAIMIFAGSMLLAKFHWLLYVFGAFLLLTGVKMWF SAGKEPDLEANPVLRWMRGHLRLSPQYHGNLLSVIKDGKRWFTPLFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILVFIGTKMMIIDLYKIPVLVSLGVVVAILVATIVLSLLRPPKPAGH >Mature_318_residues MQTIGNVWLWGGFAVVVIAALLIDLVLMRHGGAHKVTFKEATWWSIGWVLLALAFNAGLWWYLQGSVGDAQADQIGLQFL TGYLVEKSLAVDNIFVFLMVMTYFGVPEEQRQRVLIIGVLGAIVLRAIMIFAGSMLLAKFHWLLYVFGAFLLLTGVKMWF SAGKEPDLEANPVLRWMRGHLRLSPQYHGNLLSVIKDGKRWFTPLFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILVFIGTKMMIIDLYKIPVLVSLGVVVAILVATIVLSLLRPPKPAGH
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=308, Percent_Identity=60.3896103896104, Blast_Score=356, Evalue=1e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 35250; Mature: 35250
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTIGNVWLWGGFAVVVIAALLIDLVLMRHGGAHKVTFKEATWWSIGWVLLALAFNAGLW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCEE WYLQGSVGDAQADQIGLQFLTGYLVEKSLAVDNIFVFLMVMTYFGVPEEQRQRVLIIGVL EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEHHHHH GAIVLRAIMIFAGSMLLAKFHWLLYVFGAFLLLTGVKMWFSAGKEPDLEANPVLRWMRGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LRLSPQYHGNLLSVIKDGKRWFTPLFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS HEECCHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHH NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILVFIGTKMMIIDLYKIPVLVSLGVVVAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LVATIVLSLLRPPKPAGH HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQTIGNVWLWGGFAVVVIAALLIDLVLMRHGGAHKVTFKEATWWSIGWVLLALAFNAGLW CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCEE WYLQGSVGDAQADQIGLQFLTGYLVEKSLAVDNIFVFLMVMTYFGVPEEQRQRVLIIGVL EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEEHHHHH GAIVLRAIMIFAGSMLLAKFHWLLYVFGAFLLLTGVKMWFSAGKEPDLEANPVLRWMRGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH LRLSPQYHGNLLSVIKDGKRWFTPLFVVLILIAVIDVIFAVDSIPAIFAITTDPFIVLTS HEECCHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEHH NVFAVLGLRAMFFLLAGMADRFHLLPYGLAVILVFIGTKMMIIDLYKIPVLVSLGVVVAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LVATIVLSLLRPPKPAGH HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]