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The map label for this gene is yrbD [C]

Identifier: 21245053

GI number: 21245053

Start: 5136029

End: 5136568

Strand: Direct

Name: yrbD [C]

Synonym: XAC4341

Alternate gene names: 21245053

Gene position: 5136029-5136568 (Clockwise)

Preceding gene: 21245052

Following gene: 21245054

Centisome position: 99.24

GC content: 66.11

Gene sequence:

>540_bases
ATGCGTGGACCACGACTCGAATTCGCCGTCGGCGCCTTTTTGCTGCTGACCCTGGCCTCGCTGCTGGTGCTGGCGGTGGC
CTCGACCAACCAGCGCTGGGGCTTTGGCTCCAGCCAGTACACGCTGACCGCCCGCTTCAGCCAGATCGGCCAGCTGCGCG
CGCAGGCACCGGTGAAGATCGGCGGCGTGACCATCGGCAAGGTGGCCGACATCAGCCTGGACCCGACCAAGTTCGATTCG
ATCGTGACCCTGTCGCTGGATACCAAGTACAAGGACCTGCCTGCCGACACCTCGGCCGGCATCTTCACCAGCGGCTTGCT
CGGTGAGAGTTATATCGGGCTGCAGCCGGGCGGCGACCCGGACACCCTCAAGCCGGGCGACGAAATCGGCTTCACCCAGC
CGGCAGTGGATCTGCTGCAGCTGGTCGGCAAATACATGTTCAGTGGTGGTGGCGGCGGCAGCAATGCCCCGGCCGCCGCC
AACGGCCAGGCGCCCGCGCCTGCCCAAACCGCTCCTCCCTCTACGGAACCACACCAATGA

Upstream 100 bases:

>100_bases
TCGCCACCACCCGCGCGGTGGTGAACGCCTCGTTGCTGGTGCTGATGTTCAACTTCGTCCTTTCTGCAATGTTGTTTAGG
TGAGTGGAATAACTATGGCC

Downstream 100 bases:

>100_bases
AGACCACTGTGCTTTCTGCCGTCCTGGCCTCGACCCTGCTGGTGTGCGCACCGGCGACCGTGCTGGCGCAGCCGGCCGCT
GCCAGCGCGCCTGCGCAGGG

Product: toluene tolerance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MRGPRLEFAVGAFLLLTLASLLVLAVASTNQRWGFGSSQYTLTARFSQIGQLRAQAPVKIGGVTIGKVADISLDPTKFDS
IVTLSLDTKYKDLPADTSAGIFTSGLLGESYIGLQPGGDPDTLKPGDEIGFTQPAVDLLQLVGKYMFSGGGGGSNAPAAA
NGQAPAPAQTAPPSTEPHQ

Sequences:

>Translated_179_residues
MRGPRLEFAVGAFLLLTLASLLVLAVASTNQRWGFGSSQYTLTARFSQIGQLRAQAPVKIGGVTIGKVADISLDPTKFDS
IVTLSLDTKYKDLPADTSAGIFTSGLLGESYIGLQPGGDPDTLKPGDEIGFTQPAVDLLQLVGKYMFSGGGGGSNAPAAA
NGQAPAPAQTAPPSTEPHQ
>Mature_179_residues
MRGPRLEFAVGAFLLLTLASLLVLAVASTNQRWGFGSSQYTLTARFSQIGQLRAQAPVKIGGVTIGKVADISLDPTKFDS
IVTLSLDTKYKDLPADTSAGIFTSGLLGESYIGLQPGGDPDTLKPGDEIGFTQPAVDLLQLVGKYMFSGGGGGSNAPAAA
NGQAPAPAQTAPPSTEPHQ

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaD family [H]

Homologues:

Organism=Escherichia coli, GI1789584, Length=182, Percent_Identity=40.1098901098901, Blast_Score=104, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003399 [H]

Pfam domain/function: PF02470 MCE [H]

EC number: NA

Molecular weight: Translated: 18433; Mature: 18433

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGPRLEFAVGAFLLLTLASLLVLAVASTNQRWGFGSSQYTLTARFSQIGQLRAQAPVKI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCEEE
GGVTIGKVADISLDPTKFDSIVTLSLDTKYKDLPADTSAGIFTSGLLGESYIGLQPGGDP
CCEEECCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCEECCCCCCCC
DTLKPGDEIGFTQPAVDLLQLVGKYMFSGGGGGSNAPAAANGQAPAPAQTAPPSTEPHQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRGPRLEFAVGAFLLLTLASLLVLAVASTNQRWGFGSSQYTLTARFSQIGQLRAQAPVKI
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCEEE
GGVTIGKVADISLDPTKFDSIVTLSLDTKYKDLPADTSAGIFTSGLLGESYIGLQPGGDP
CCEEECCEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHCCCCCCEECCCCCCCC
DTLKPGDEIGFTQPAVDLLQLVGKYMFSGGGGGSNAPAAANGQAPAPAQTAPPSTEPHQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]