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The map label for this gene is yrbC [H]

Identifier: 21245054

GI number: 21245054

Start: 5136565

End: 5137227

Strand: Direct

Name: yrbC [H]

Synonym: XAC4342

Alternate gene names: 21245054

Gene position: 5136565-5137227 (Clockwise)

Preceding gene: 21245053

Following gene: 21245055

Centisome position: 99.25

GC content: 65.91

Gene sequence:

>663_bases
ATGAAGACCACTGTGCTTTCTGCCGTCCTGGCCTCGACCCTGCTGGTGTGCGCACCGGCGACCGTGCTGGCGCAGCCGGC
CGCTGCCAGCGCGCCTGCGCAGGGCGCGGCGACCAAGACCGTCATCGACAGCAGCACCCGCATCCTGAGCACGCTGGACC
AGCGCCGTGCCGAGTTCCGCAGCAATCCGGCGGCGCTGCGTCAGTTCATCAATGGCGAATTGAACAAGGCCTTCGACCGC
GACTACTCGGCCCGTCTGGTGCTGGGTGTGCATGGCCGCGGCGCCTCCGATGCCGACGTCAAGCTGTTTGCCGATGCGCT
GGCCGACAACCTGATGCAGCGTTATGGCACCGCGCTGCTGAATTTCGAAGGCAAGCCGACCTTCCGCGCCAAGTCCGAAA
GCGCGCTGCCGGGCAACCGCGGCGTCAAGGTGTCCACCGACCTGCTGCGTGCCGGCAACGACCCGACCCCGGTCGATTAC
CTGATGCGCAATACCGGCGGCCAGTGGAAGATCTTCGACGTGATGATCGAAGGCATTTCCTACGTGCAGACCTTCAAGAC
CCAGTTCGACGGCCCGCTGCGCGAGAAGGGCATCGCCAAGGTGGCCGCCGAGCTGCGTAGCGGCAACCTGCAGGTCGGTG
CGGCACCGGCCAATGGCAACTAA

Upstream 100 bases:

>100_bases
TGTTCAGTGGTGGTGGCGGCGGCAGCAATGCCCCGGCCGCCGCCAACGGCCAGGCGCCCGCGCCTGCCCAAACCGCTCCT
CCCTCTACGGAACCACACCA

Downstream 100 bases:

>100_bases
TACCGTGCAACGCATGGGCGACACGCTGGTCATCACCGGCGTGCTCGACCGTGCGGCGGTCACCGCGGCCTGGCCGCAGG
CGATCGCACAGCTGGATGGC

Product: toluene tolerance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKTTVLSAVLASTLLVCAPATVLAQPAAASAPAQGAATKTVIDSSTRILSTLDQRRAEFRSNPAALRQFINGELNKAFDR
DYSARLVLGVHGRGASDADVKLFADALADNLMQRYGTALLNFEGKPTFRAKSESALPGNRGVKVSTDLLRAGNDPTPVDY
LMRNTGGQWKIFDVMIEGISYVQTFKTQFDGPLREKGIAKVAAELRSGNLQVGAAPANGN

Sequences:

>Translated_220_residues
MKTTVLSAVLASTLLVCAPATVLAQPAAASAPAQGAATKTVIDSSTRILSTLDQRRAEFRSNPAALRQFINGELNKAFDR
DYSARLVLGVHGRGASDADVKLFADALADNLMQRYGTALLNFEGKPTFRAKSESALPGNRGVKVSTDLLRAGNDPTPVDY
LMRNTGGQWKIFDVMIEGISYVQTFKTQFDGPLREKGIAKVAAELRSGNLQVGAAPANGN
>Mature_220_residues
MKTTVLSAVLASTLLVCAPATVLAQPAAASAPAQGAATKTVIDSSTRILSTLDQRRAEFRSNPAALRQFINGELNKAFDR
DYSARLVLGVHGRGASDADVKLFADALADNLMQRYGTALLNFEGKPTFRAKSESALPGNRGVKVSTDLLRAGNDPTPVDY
LMRNTGGQWKIFDVMIEGISYVQTFKTQFDGPLREKGIAKVAAELRSGNLQVGAAPANGN

Specific function: Actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner membrane. May transfer phospholipid across the peripl

COG id: COG2854

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, auxiliary component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaC/ttg2D family [H]

Homologues:

Organism=Escherichia coli, GI1789583, Length=210, Percent_Identity=27.1428571428571, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023094
- InterPro:   IPR008869 [H]

Pfam domain/function: PF05494 Tol_Tol_Ttg2 [H]

EC number: NA

Molecular weight: Translated: 23398; Mature: 23398

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTVLSAVLASTLLVCAPATVLAQPAAASAPAQGAATKTVIDSSTRILSTLDQRRAEFR
CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHC
SNPAALRQFINGELNKAFDRDYSARLVLGVHGRGASDADVKLFADALADNLMQRYGTALL
CCHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEE
NFEGKPTFRAKSESALPGNRGVKVSTDLLRAGNDPTPVDYLMRNTGGQWKIFDVMIEGIS
ECCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCHHHHHHCCCCCEEHHHHHHHHHH
YVQTFKTQFDGPLREKGIAKVAAELRSGNLQVGAAPANGN
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC
>Mature Secondary Structure
MKTTVLSAVLASTLLVCAPATVLAQPAAASAPAQGAATKTVIDSSTRILSTLDQRRAEFR
CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHC
SNPAALRQFINGELNKAFDRDYSARLVLGVHGRGASDADVKLFADALADNLMQRYGTALL
CCHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEE
NFEGKPTFRAKSESALPGNRGVKVSTDLLRAGNDPTPVDYLMRNTGGQWKIFDVMIEGIS
ECCCCCCCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCHHHHHHCCCCCEEHHHHHHHHHH
YVQTFKTQFDGPLREKGIAKVAAELRSGNLQVGAAPANGN
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]