Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244970
Identifier: 21244970
GI number: 21244970
Start: 5020301
End: 5020702
Strand: Reverse
Name: 21244970
Synonym: XAC4253
Alternate gene names: NA
Gene position: 5020702-5020301 (Counterclockwise)
Preceding gene: 21244971
Following gene: 21244969
Centisome position: 97.01
GC content: 62.94
Gene sequence:
>402_bases ATGACAATTGCTGATGCTCACCGCGCTCGCAGACACTTACGTGGTGTCCTGACCTTATGCCGCAGGCATCATGTCATCGT GCTGGCTGCATGCATCGTGCGGCGGGCAGTCGCGCTGATCGGGCTGGCCACTGCCGCACAACACGGCTGGTTGGCGTGTC TTTTTACGCTGCTTTCTGACCTGCTTGCGTGTCATGCAGTTGCAACAGTCGCCGGCTTCGGCGGCGTCGCCGCTGCGGCG AGCGACATGGTGATCGCACCGTTCATTGGTTTCGTTTTGCAGGCCATCGGCAGCTGCGTGCCGGTCTTTTTGATGGTGGG TGCGGCCTACATTCTGGCGCTGGCGGTGGTGCACCGCCTGGTGCCACGACGGCAGCCGGTGCGAGTGGAGCAGCCGGCCT AG
Upstream 100 bases:
>100_bases ACAAGGAAGCTGCGTACCTGATCCGCGCCGACGGCACCGAACGTCCCGCGCTCACGTGGCTGCGCGATTACGTTGCTGCC CATCCCGGTACACCTGCGCC
Downstream 100 bases:
>100_bases ACGCGGTTCCAGGTGTCTGCACTTTGGCGTCGATCGGACGCACGTCAGCGCACCTGTCCTTTCCGTGACTGCTTCGCTCA CTCATCGAGGATGCCAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: Hexuronate Transporter; Facilitator Transporter; Hexuronate Transporter Protein; Hexuranate Transporter
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MTIADAHRARRHLRGVLTLCRRHHVIVLAACIVRRAVALIGLATAAQHGWLACLFTLLSDLLACHAVATVAGFGGVAAAA SDMVIAPFIGFVLQAIGSCVPVFLMVGAAYILALAVVHRLVPRRQPVRVEQPA
Sequences:
>Translated_133_residues MTIADAHRARRHLRGVLTLCRRHHVIVLAACIVRRAVALIGLATAAQHGWLACLFTLLSDLLACHAVATVAGFGGVAAAA SDMVIAPFIGFVLQAIGSCVPVFLMVGAAYILALAVVHRLVPRRQPVRVEQPA >Mature_132_residues TIADAHRARRHLRGVLTLCRRHHVIVLAACIVRRAVALIGLATAAQHGWLACLFTLLSDLLACHAVATVAGFGGVAAAAS DMVIAPFIGFVLQAIGSCVPVFLMVGAAYILALAVVHRLVPRRQPVRVEQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14061; Mature: 13930
Theoretical pI: Translated: 11.48; Mature: 11.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIADAHRARRHLRGVLTLCRRHHVIVLAACIVRRAVALIGLATAAQHGWLACLFTLLSD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLACHAVATVAGFGGVAAAASDMVIAPFIGFVLQAIGSCVPVFLMVGAAYILALAVVHRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPRRQPVRVEQPA HCCCCCCCCCCCC >Mature Secondary Structure TIADAHRARRHLRGVLTLCRRHHVIVLAACIVRRAVALIGLATAAQHGWLACLFTLLSD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLACHAVATVAGFGGVAAAASDMVIAPFIGFVLQAIGSCVPVFLMVGAAYILALAVVHRL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPRRQPVRVEQPA HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA