Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244963
Identifier: 21244963
GI number: 21244963
Start: 5011300
End: 5011746
Strand: Reverse
Name: 21244963
Synonym: XAC4246
Alternate gene names: NA
Gene position: 5011746-5011300 (Counterclockwise)
Preceding gene: 21244965
Following gene: 21244962
Centisome position: 96.83
GC content: 67.34
Gene sequence:
>447_bases ATGTACGAAGCTTGCGTTTCCCGATTGCTGCGCACCCTGGCGTGCGTTGTCGTAGCGGCGCTGCCGTTGATGCCTGCGCT GGCGGCAGCGTCCTCGCCAGTACAGGGCCTATGGCTGACTGCGGCCAAGGACGCCGTCATCGCATTTGCACCGTGTACCG GGGCCGCCAGCGCGATGTGCGGAAAGGTGGTGTGGGACAAGGACGCCGGCACGCCGAAGGACACCTGCGGTGTGCAGATC GCGCGCCTGGAGCGCGACGACAACGGCACCTGGCGCGACGGTTGGGCATTCGATCCGCGCAGCGGCAAGCGCTACAAGGC CACGCTGCGTGGCAAGGGCGACAGCCTGACCCTGCGCGCGTTCATCGGCGCCGAAGTGCTCGGCGAAAACATGCTGTTCA CCCGCGTGCAGGTCCTGCCATCCGCGCCGGTGTGCGCCAGCCATTAG
Upstream 100 bases:
>100_bases CCAGGCAATCGCCACGCTTGAGCCTGTTGCAAGAAGGTAATCATCGCTATACGGTAGTTCTCACTACTGTCATGAGCGGG TTGCCCGCGGGGTTGCGGCA
Downstream 100 bases:
>100_bases CTGCGTCCAGCGCGGCATGCGCGCGCAGCACCGACCGCCGCGATCGCGACGGTTCTCACTCACATCCACCGGGGGAATCC AGATGGCGAAGATCCATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MYEACVSRLLRTLACVVVAALPLMPALAAASSPVQGLWLTAAKDAVIAFAPCTGAASAMCGKVVWDKDAGTPKDTCGVQI ARLERDDNGTWRDGWAFDPRSGKRYKATLRGKGDSLTLRAFIGAEVLGENMLFTRVQVLPSAPVCASH
Sequences:
>Translated_148_residues MYEACVSRLLRTLACVVVAALPLMPALAAASSPVQGLWLTAAKDAVIAFAPCTGAASAMCGKVVWDKDAGTPKDTCGVQI ARLERDDNGTWRDGWAFDPRSGKRYKATLRGKGDSLTLRAFIGAEVLGENMLFTRVQVLPSAPVCASH >Mature_148_residues MYEACVSRLLRTLACVVVAALPLMPALAAASSPVQGLWLTAAKDAVIAFAPCTGAASAMCGKVVWDKDAGTPKDTCGVQI ARLERDDNGTWRDGWAFDPRSGKRYKATLRGKGDSLTLRAFIGAEVLGENMLFTRVQVLPSAPVCASH
Specific function: Unknown
COG id: COG4731
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15682; Mature: 15682
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYEACVSRLLRTLACVVVAALPLMPALAAASSPVQGLWLTAAKDAVIAFAPCTGAASAMC CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCHHHHH GKVVWDKDAGTPKDTCGVQIARLERDDNGTWRDGWAFDPRSGKRYKATLRGKGDSLTLRA CCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEHE FIGAEVLGENMLFTRVQVLPSAPVCASH EHHHHHHCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MYEACVSRLLRTLACVVVAALPLMPALAAASSPVQGLWLTAAKDAVIAFAPCTGAASAMC CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCHHHHH GKVVWDKDAGTPKDTCGVQIARLERDDNGTWRDGWAFDPRSGKRYKATLRGKGDSLTLRA CCEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEHE FIGAEVLGENMLFTRVQVLPSAPVCASH EHHHHHHCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA