Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244962
Identifier: 21244962
GI number: 21244962
Start: 5010300
End: 5011283
Strand: Reverse
Name: 21244962
Synonym: XAC4245
Alternate gene names: NA
Gene position: 5011283-5010300 (Counterclockwise)
Preceding gene: 21244963
Following gene: 77748768
Centisome position: 96.83
GC content: 65.75
Gene sequence:
>984_bases ATGCGCGCGCAGCACCGACCGCCGCGATCGCGACGGTTCTCACTCACATCCACCGGGGGAATCCAGATGGCGAAGATCCA TGTCGGCGCGGTTGTCGCGTGCGGGTTGCTGCAAGGCGCGGCTTGCCTACCGGCGCAGGCCCAGCAAGCCGACTCGGCCA GCGAGGGCAGCGTGGCCACCTATCAGTTCGACAACCAGGTCAAGCTGATGAGCGAACAGCGCACGCGCGGCATCTCCGAT TCGTTGATGCGGCCCTCGGCCAAGTGGAGCACCCAGTTCGTGCATGCCAGCGGGCTGGTCGCCTTGCTGGAAGTGGCCGG GGTCAGCAAGCAGCAGTTCGTCAATGGCGATGGCCTGGGCGTCACCCTGGCCGGCGGGTATCGCTTCGGCGATCCGGACC GCTGGCACGCCGGCGTCGGCTTGGCCACGGAGCGATTCCCGGGGGCGCGCTTCATGGCGCCGCACGGCATCGACCTGGAA ACCGGCACGCCGACCGACGTGCGCACGACCAACTACAACAGCGATTTCGCCGTGATGGAGCTGGGCTACGGCATCGTCGA AGGGCGCGTGTTGTATGTGGTGTCCAAGACCTACCGCGGTGCCGATACCGGCGGCGTGTGCGGGCAGATCCTGCGCTTCT CGATCGATCCGACTGCCGCATTGCAGTGCTACGCGCGCGGCGAACAGGATTCGCGCGGCACCGTGTTGGCCGACCTCAAT AGCCAGTTGCCGTTGCTGCCCTCGCTGCTGCCGTCCACGACGCTGCGCCTGCATGCCGGCTACCAGAAACTGGCCAACTT TCGCGAAGGCAACTTCGCCGACTACCAGATCGGCATCACCCATCGGCGCTGGGGCCTGGACTGGAACCTGGACTGGCTGA CCACCAACACCAACGCGCATCAGTTGTACTGGGTGCAGGATGGCGAGCGTATCCGCAAGACCGACGGCGATGCGCTGGTG TTCTCGATCGGCTACACGTTCTGA
Upstream 100 bases:
>100_bases ATCGGCGCCGAAGTGCTCGGCGAAAACATGCTGTTCACCCGCGTGCAGGTCCTGCCATCCGCGCCGGTGTGCGCCAGCCA TTAGCTGCGTCCAGCGCGGC
Downstream 100 bases:
>100_bases TGCGCACGCAAACGCTCGCAGACGACACCGGCGGCAATGCGCCGCTGGTGCTGGCGGTGGACCTGGGAACCTCCGGCTGT AACTGCGCGTTGGTGACGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MRAQHRPPRSRRFSLTSTGGIQMAKIHVGAVVACGLLQGAACLPAQAQQADSASEGSVATYQFDNQVKLMSEQRTRGISD SLMRPSAKWSTQFVHASGLVALLEVAGVSKQQFVNGDGLGVTLAGGYRFGDPDRWHAGVGLATERFPGARFMAPHGIDLE TGTPTDVRTTNYNSDFAVMELGYGIVEGRVLYVVSKTYRGADTGGVCGQILRFSIDPTAALQCYARGEQDSRGTVLADLN SQLPLLPSLLPSTTLRLHAGYQKLANFREGNFADYQIGITHRRWGLDWNLDWLTTNTNAHQLYWVQDGERIRKTDGDALV FSIGYTF
Sequences:
>Translated_327_residues MRAQHRPPRSRRFSLTSTGGIQMAKIHVGAVVACGLLQGAACLPAQAQQADSASEGSVATYQFDNQVKLMSEQRTRGISD SLMRPSAKWSTQFVHASGLVALLEVAGVSKQQFVNGDGLGVTLAGGYRFGDPDRWHAGVGLATERFPGARFMAPHGIDLE TGTPTDVRTTNYNSDFAVMELGYGIVEGRVLYVVSKTYRGADTGGVCGQILRFSIDPTAALQCYARGEQDSRGTVLADLN SQLPLLPSLLPSTTLRLHAGYQKLANFREGNFADYQIGITHRRWGLDWNLDWLTTNTNAHQLYWVQDGERIRKTDGDALV FSIGYTF >Mature_327_residues MRAQHRPPRSRRFSLTSTGGIQMAKIHVGAVVACGLLQGAACLPAQAQQADSASEGSVATYQFDNQVKLMSEQRTRGISD SLMRPSAKWSTQFVHASGLVALLEVAGVSKQQFVNGDGLGVTLAGGYRFGDPDRWHAGVGLATERFPGARFMAPHGIDLE TGTPTDVRTTNYNSDFAVMELGYGIVEGRVLYVVSKTYRGADTGGVCGQILRFSIDPTAALQCYARGEQDSRGTVLADLN SQLPLLPSLLPSTTLRLHAGYQKLANFREGNFADYQIGITHRRWGLDWNLDWLTTNTNAHQLYWVQDGERIRKTDGDALV FSIGYTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35693; Mature: 35693
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAQHRPPRSRRFSLTSTGGIQMAKIHVGAVVACGLLQGAACLPAQAQQADSASEGSVAT CCCCCCCCCCCEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEE YQFDNQVKLMSEQRTRGISDSLMRPSAKWSTQFVHASGLVALLEVAGVSKQQFVNGDGLG EEECCCEEEHHHHHHCCCHHHHCCCCCCCCEEEEECCCHHHHHHHHCCCHHHEECCCCCE VTLAGGYRFGDPDRWHAGVGLATERFPGARFMAPHGIDLETGTPTDVRTTNYNSDFAVME EEEECCEECCCCCCEECCCCCCHHCCCCCEEECCCCCCCCCCCCCCEEECCCCCCEEEEE LGYGIVEGRVLYVVSKTYRGADTGGVCGQILRFSIDPTAALQCYARGEQDSRGTVLADLN ECCEEECCEEEEEEEECCCCCCCCCHHHHHHEECCCCHHEEEEEECCCCCCCCCEEEECC SQLPLLPSLLPSTTLRLHAGYQKLANFREGNFADYQIGITHRRWGLDWNLDWLTTNTNAH CCCCCCHHHCCCCEEEEECCHHHHHCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCE QLYWVQDGERIRKTDGDALVFSIGYTF EEEEEECCCEEECCCCCEEEEEEECCC >Mature Secondary Structure MRAQHRPPRSRRFSLTSTGGIQMAKIHVGAVVACGLLQGAACLPAQAQQADSASEGSVAT CCCCCCCCCCCEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCEEE YQFDNQVKLMSEQRTRGISDSLMRPSAKWSTQFVHASGLVALLEVAGVSKQQFVNGDGLG EEECCCEEEHHHHHHCCCHHHHCCCCCCCCEEEEECCCHHHHHHHHCCCHHHEECCCCCE VTLAGGYRFGDPDRWHAGVGLATERFPGARFMAPHGIDLETGTPTDVRTTNYNSDFAVME EEEECCEECCCCCCEECCCCCCHHCCCCCEEECCCCCCCCCCCCCCEEECCCCCCEEEEE LGYGIVEGRVLYVVSKTYRGADTGGVCGQILRFSIDPTAALQCYARGEQDSRGTVLADLN ECCEEECCEEEEEEEECCCCCCCCCHHHHHHEECCCCHHEEEEEECCCCCCCCCEEEECC SQLPLLPSLLPSTTLRLHAGYQKLANFREGNFADYQIGITHRRWGLDWNLDWLTTNTNAH CCCCCCHHHCCCCEEEEECCHHHHHCCCCCCCCEEEEEEEEEEECCCCCEEEEEECCCCE QLYWVQDGERIRKTDGDALVFSIGYTF EEEEEECCCEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA