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The map label for this gene is xylB [H]

Identifier: 77748768

GI number: 77748768

Start: 5008654

End: 5010300

Strand: Reverse

Name: xylB [H]

Synonym: XAC4244

Alternate gene names: 77748768

Gene position: 5010300-5008654 (Counterclockwise)

Preceding gene: 21244962

Following gene: 21244960

Centisome position: 96.81

GC content: 68.73

Gene sequence:

>1647_bases
ATGCGCACGCAAACGCTCGCAGACGACACCGGCGGCAATGCGCCGCTGGTGCTGGCGGTGGACCTGGGAACCTCCGGCTG
TAACTGCGCGTTGGTGACGCTGGACGGCAAGGTGCTCGCCTGGGCGTTCGAACCTGTGCAACTGCACGTGCAGGGCGTCG
CTGCCGAACAAGACCCGCACGCGTGGTGGGACGCGTTCTGCGCCACCGCCGCGGCCGTGGTGCAGGGCGATGCGGGGCTG
CGCCGACGCGTGGTGGCCGTGTGTTGCTCGACCCAGGGCGAAGGCACCGTCTGCGTGGACCACAACGGCCAGGCGCTCGG
GCGCGCCATGCTGTGGCTGGACATGCGCGGCCAGGCGGCCATCGCCCGGCGTCTGCAGGGGCGCTGGCTCAATGTGCGCG
GCTACGATCCGCTGCGCCTGTGGCGATGGTTGCGCCTGAGCGGCGGTGCGCCTGCGCGCAGCGGCAAGGATTGCGCTGGA
CACATCGCCTATCTGCGCGATCACCAGCCCGTGCGCTATGAGCGCACGCACAAGTTTCTCAACGTGCTCGACTACATGAA
TCTGCGCCTGACCGGCCGGTTCTGCGCCACCCCCGATTCGATGCTGACCACCTGGGTCACCGACAATCGCGACCCGCACC
ATATCCGCTACGACGCAGGCCTGCTGGACATGGTCGGGGTGGAGCGCGACAAGTTGCCGGACCTGCTGCCGTCCACTGCG
GTGCTGGGTCCGCTGCTGCCGCAGGTGGCCCAGGCGCTGGGCCTGTCGCCGCAGACCGTGGTGGTGGCCGGCGCGATCGA
CACCTCGGCAGTGGCGGTGGCCGCGGCGGTGGAAGATCACGCCGCGCACCTGTACCTGGGCACCTCGTCGTGGCTGGGCG
CGCATGTGCCGCGCATGAAGACCGACGTGCGCAGTACGATCGCCGCGGTGCCGTGCGCGGTGGAGGGGCGCTATCTGGCG
ATCGCCCTGCAGACCACCGCCGGCGCCAACCTGTCCTTTCTGCGCGACCGCATCCTGTTCCATGCCGACGAGCTGCTCAG
CGACGAGCAGCGCCCGGACGTCTATGAAGTGCTCAATCGCATCGCCGCACGCGTGCCCGCAGGGTCCAATGGGTTGATCT
ACATGCCCTGGCTGTTCGGCGAACGCACGCCGGTGGAAGACCCGAGCCTGCGTGCCGGCCTGATCAATCTCTCGTTGATG
CATAGCCGCGAGGACATGATCCGCGCGGTGATGGAAGGGGTGGCGTTCAACACGCGCTGGATGATGGAGCCCTTCGCACG
CCTGCTTGGCTGCGACCCAGGCACGATCGCTGCGGTCGGCGGCGGCGCCCAGTCGGATCTGTGGTGCCAGATCATTGCCG
ATGTCAGCGGCCGGCCGATCCGGCAATTGCACAATCCGATCCAGGCCAATGCGGTCGGCGCGGCCTTTATCGCCGGGGTC
GGCCTGGGCCGGCTCGGCTTCGGCGACCTGGCGGCATTGCAGCGCCCCCGGCGGGTCTACGAGCCGGATGCGGGCACGCG
TGCGCTGTACGACGACCGCTATGCGGTGTTCAAGGACCTGCAGCGCACGTTGGCGCCGATCTACCGACGGCTCAATCCCT
CCACGTCCGTTCCCGCCCAGGAGGTCGCTGCGCATGTTTGCCCATGA

Upstream 100 bases:

>100_bases
CCAACACCAACGCGCATCAGTTGTACTGGGTGCAGGATGGCGAGCGTATCCGCAAGACCGACGGCGATGCGCTGGTGTTC
TCGATCGGCTACACGTTCTG

Downstream 100 bases:

>100_bases
ACAACGCCAGCGCGTGGTCGCGCTGTGCATCGAACTGTCGCGCCGCGGCTATCTGGCTGGCACCGGCGGCAATGTCGCCT
TGCGTATCGATGCCGAGTGT

Product: xylulose kinase

Products: ADP; D-xylulose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MRTQTLADDTGGNAPLVLAVDLGTSGCNCALVTLDGKVLAWAFEPVQLHVQGVAAEQDPHAWWDAFCATAAAVVQGDAGL
RRRVVAVCCSTQGEGTVCVDHNGQALGRAMLWLDMRGQAAIARRLQGRWLNVRGYDPLRLWRWLRLSGGAPARSGKDCAG
HIAYLRDHQPVRYERTHKFLNVLDYMNLRLTGRFCATPDSMLTTWVTDNRDPHHIRYDAGLLDMVGVERDKLPDLLPSTA
VLGPLLPQVAQALGLSPQTVVVAGAIDTSAVAVAAAVEDHAAHLYLGTSSWLGAHVPRMKTDVRSTIAAVPCAVEGRYLA
IALQTTAGANLSFLRDRILFHADELLSDEQRPDVYEVLNRIAARVPAGSNGLIYMPWLFGERTPVEDPSLRAGLINLSLM
HSREDMIRAVMEGVAFNTRWMMEPFARLLGCDPGTIAAVGGGAQSDLWCQIIADVSGRPIRQLHNPIQANAVGAAFIAGV
GLGRLGFGDLAALQRPRRVYEPDAGTRALYDDRYAVFKDLQRTLAPIYRRLNPSTSVPAQEVAAHVCP

Sequences:

>Translated_548_residues
MRTQTLADDTGGNAPLVLAVDLGTSGCNCALVTLDGKVLAWAFEPVQLHVQGVAAEQDPHAWWDAFCATAAAVVQGDAGL
RRRVVAVCCSTQGEGTVCVDHNGQALGRAMLWLDMRGQAAIARRLQGRWLNVRGYDPLRLWRWLRLSGGAPARSGKDCAG
HIAYLRDHQPVRYERTHKFLNVLDYMNLRLTGRFCATPDSMLTTWVTDNRDPHHIRYDAGLLDMVGVERDKLPDLLPSTA
VLGPLLPQVAQALGLSPQTVVVAGAIDTSAVAVAAAVEDHAAHLYLGTSSWLGAHVPRMKTDVRSTIAAVPCAVEGRYLA
IALQTTAGANLSFLRDRILFHADELLSDEQRPDVYEVLNRIAARVPAGSNGLIYMPWLFGERTPVEDPSLRAGLINLSLM
HSREDMIRAVMEGVAFNTRWMMEPFARLLGCDPGTIAAVGGGAQSDLWCQIIADVSGRPIRQLHNPIQANAVGAAFIAGV
GLGRLGFGDLAALQRPRRVYEPDAGTRALYDDRYAVFKDLQRTLAPIYRRLNPSTSVPAQEVAAHVCP
>Mature_548_residues
MRTQTLADDTGGNAPLVLAVDLGTSGCNCALVTLDGKVLAWAFEPVQLHVQGVAAEQDPHAWWDAFCATAAAVVQGDAGL
RRRVVAVCCSTQGEGTVCVDHNGQALGRAMLWLDMRGQAAIARRLQGRWLNVRGYDPLRLWRWLRLSGGAPARSGKDCAG
HIAYLRDHQPVRYERTHKFLNVLDYMNLRLTGRFCATPDSMLTTWVTDNRDPHHIRYDAGLLDMVGVERDKLPDLLPSTA
VLGPLLPQVAQALGLSPQTVVVAGAIDTSAVAVAAAVEDHAAHLYLGTSSWLGAHVPRMKTDVRSTIAAVPCAVEGRYLA
IALQTTAGANLSFLRDRILFHADELLSDEQRPDVYEVLNRIAARVPAGSNGLIYMPWLFGERTPVEDPSLRAGLINLSLM
HSREDMIRAVMEGVAFNTRWMMEPFARLLGCDPGTIAAVGGGAQSDLWCQIIADVSGRPIRQLHNPIQANAVGAAFIAGV
GLGRLGFGDLAALQRPRRVYEPDAGTRALYDDRYAVFKDLQRTLAPIYRRLNPSTSVPAQEVAAHVCP

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Escherichia coli, GI1789987, Length=521, Percent_Identity=25.7197696737044, Blast_Score=132, Evalue=8e-32,
Organism=Escherichia coli, GI1790005, Length=531, Percent_Identity=25.2354048964218, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1787789, Length=378, Percent_Identity=29.1005291005291, Blast_Score=109, Evalue=6e-25,
Organism=Escherichia coli, GI1789138, Length=361, Percent_Identity=27.1468144044321, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1790361, Length=524, Percent_Identity=22.5190839694656, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789168, Length=488, Percent_Identity=21.3114754098361, Blast_Score=69, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: 2.7.1.17

Molecular weight: Translated: 59503; Mature: 59503

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00297 HSP70_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTQTLADDTGGNAPLVLAVDLGTSGCNCALVTLDGKVLAWAFEPVQLHVQGVAAEQDPH
CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCEEEEEEECCEEEEEEEECCCCCCH
AWWDAFCATAAAVVQGDAGLRRRVVAVCCSTQGEGTVCVDHNGQALGRAMLWLDMRGQAA
HHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCEEEEECCCCHHHCEEEEEEECCCHHH
IARRLQGRWLNVRGYDPLRLWRWLRLSGGAPARSGKDCAGHIAYLRDHQPVRYERTHKFL
HHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
NVLDYMNLRLTGRFCATPDSMLTTWVTDNRDPHHIRYDAGLLDMVGVERDKLPDLLPSTA
HHHHHCCEEEEEEEECCCHHHEEEEECCCCCCCEEEECCCCHHHHCCCHHHCCCCCCCHH
VLGPLLPQVAQALGLSPQTVVVAGAIDTSAVAVAAAVEDHAAHLYLGTSSWLGAHVPRMK
HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCCHHH
TDVRSTIAAVPCAVEGRYLAIALQTTAGANLSFLRDRILFHADELLSDEQRPDVYEVLNR
HHHHHHHHHCCEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IAARVPAGSNGLIYMPWLFGERTPVEDPSLRAGLINLSLMHSREDMIRAVMEGVAFNTRW
HHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCHH
MMEPFARLLGCDPGTIAAVGGGAQSDLWCQIIADVSGRPIRQLHNPIQANAVGAAFIAGV
HHHHHHHHHCCCCCCEEEECCCCCCCHHEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHC
GLGRLGFGDLAALQRPRRVYEPDAGTRALYDDRYAVFKDLQRTLAPIYRRLNPSTSVPAQ
CCCCCCCHHHHHHHCCCHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EVAAHVCP
HHHHHCCC
>Mature Secondary Structure
MRTQTLADDTGGNAPLVLAVDLGTSGCNCALVTLDGKVLAWAFEPVQLHVQGVAAEQDPH
CCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCEEEEEEECCEEEEEEEECCCCCCH
AWWDAFCATAAAVVQGDAGLRRRVVAVCCSTQGEGTVCVDHNGQALGRAMLWLDMRGQAA
HHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCEEEEECCCCHHHCEEEEEEECCCHHH
IARRLQGRWLNVRGYDPLRLWRWLRLSGGAPARSGKDCAGHIAYLRDHQPVRYERTHKFL
HHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHH
NVLDYMNLRLTGRFCATPDSMLTTWVTDNRDPHHIRYDAGLLDMVGVERDKLPDLLPSTA
HHHHHCCEEEEEEEECCCHHHEEEEECCCCCCCEEEECCCCHHHHCCCHHHCCCCCCCHH
VLGPLLPQVAQALGLSPQTVVVAGAIDTSAVAVAAAVEDHAAHLYLGTSSWLGAHVPRMK
HHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCCHHHCCCCHHH
TDVRSTIAAVPCAVEGRYLAIALQTTAGANLSFLRDRILFHADELLSDEQRPDVYEVLNR
HHHHHHHHHCCEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IAARVPAGSNGLIYMPWLFGERTPVEDPSLRAGLINLSLMHSREDMIRAVMEGVAFNTRW
HHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHCCCCHH
MMEPFARLLGCDPGTIAAVGGGAQSDLWCQIIADVSGRPIRQLHNPIQANAVGAAFIAGV
HHHHHHHHHCCCCCCEEEECCCCCCCHHEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHC
GLGRLGFGDLAALQRPRRVYEPDAGTRALYDDRYAVFKDLQRTLAPIYRRLNPSTSVPAQ
CCCCCCCHHHHHHHCCCHHCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH
EVAAHVCP
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; D-xylulose

Specific reaction: ATP + D-xylulose = ADP + D-xylulose 5-phosphate

General reaction: Phospho group transfer [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA