| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is aguA [H]
Identifier: 21244944
GI number: 21244944
Start: 4987276
End: 4989486
Strand: Direct
Name: aguA [H]
Synonym: XAC4227
Alternate gene names: 21244944
Gene position: 4987276-4989486 (Clockwise)
Preceding gene: 77748765
Following gene: 21244945
Centisome position: 96.36
GC content: 63.77
Gene sequence:
>2211_bases ATGAGCGGGTCTGCAATGAAGCGACATGGCATCGGTACTGGCGCAATTACGCTGCCGGCATTGATGTGGCTGGCGCTGTT ATGCAGTGGCCTGCTGGTCACCGCAAGCGCGCATGCCGAAGATGGCTACGATCTATGGTTGCGCTACCAACCGCTGGCCA ATGCCGCGCAATTGCGCGACAGTGCCAGCCAATTGGTCGTCGTTGGCGACTCGCCCACCCTGCACGCAGCACGCGATGAA CTGGCGCGCGGCCTGCAGGGATTATTGGGAAGCACACCGCCGCGCGTGGACGCGGTGACGCAGGATGGCGCACTCGTATT GGGCGCCGCCAGCGCGCCACAGATTGCGGCCCTGAAGCTCAATGCCGGCCAGTTGGGCCGCGACGGCTATCTCATTCGTA GCGCCGAGATTGATGGACATCGCGTCACCGCCATTGTCGGGGGCAGCGATATCGGGGTGTTATACGGCACATTCCACCTG TTGCGTCTGCTGCAGACCGGACAGTCGCTTGCGGCGCTGGATGTGCGCACATCGCCACGCCTGCAGCTACGCATGCTCAA TCATTGGGACAATCTCGATGGTCTGGTGGAACGTGGCTATGCCGGCGCGTCGCTGTGGAACTGGCAGACGCTGCCCGGCT ACCTGGATCCGCGTTACACCGACTACGCGCGTGCCAATGCATCGCTGGGCATCAATGGAACCGTGCTCAACAACGTCAAT GCCAACGCCTGGAGTCTGACGCCGCAATACCTCGACAAGGCGGCAGCCCTGGCAAACGTGTTTCGTCCCTACGGGATTGC CGTATTCCTCAGCGCGCGCTTCAGTGCACCGATCGAAATCGGTGGCCTGAAAACCGCCGACCCGCTGGACCCGCAGGTAC AGCGCTGGTGGCGCGACACCGCCGACGCCATCTATGCGCGCATTCCGGATTTCGGCGGGTTTCTGGTCAAGGCCAACTCC GAAGGCCAGCCCGGCCCGCAAGACTATGGACGCAGCCACGCCGACGGCGCGAACCTGCTGGCCGACGCACTGGCGCCACA TGGCGGAGTGGTGATGTGGCGCGCCTTTGTTTACTCGCATGAACAGCCGGACGATCGCGCCAAGCAGGCTTACAGCGAGT TCGTGCCGCTGGATGGTGCATTTGCCGACAACGTGATCGTGCAGGTGAAAAACGGGGCCATCGACTTCCAGCCGCGCGAG CCATTTCACCCGTTGTTCGGTGCGATGCGCAAGACGCCATTGATGCCGGAGTTTCAGATCACCAAGGAATATCTCGGCTT TTCCACCCACCTGGCCTATCTGGGCCCGCTATTTTCCGAGACCTTGCAAGCCGACACCTATGCGCGCGGCAAGGGCTCGA CCGTTGCAAAGACAGTGGATGGCCGCTTGTTCCCCGAGAGCAAACGCACACGGCTGACCGGTATTGCCGGCGTGGCCAAT ATTGGCGCCGATCACAACTGGAGCGGCTCGATCTTCGATCAGGCCAACTGGTACGCGTACGGGCGGCTGGCGTGGGACCC GCAGCTGTCGCCGCAGGCCATTGCGCAGGAATGGGCGCGCATGACATTTTCCAACGACCCGGCGGTGGTCGAGCCGGTGG TGGGCATGATGCTGCGTTCGCGCGAGGCGGTGGTGGACTATATGACTCCGCTCGGTCTGCATCACCTGATGGGGCGCGGC CACCATTACGGCCCGGCACCGTGGGATGCCGGCAGCGAACGCCCGGACTGGGATCCGGTGTATTACCACCGCGCCGACCG CAACGGGATTGGCTTCGACCGCAGCGCCAGCGGCAGCAATGCCGTTGCGCAATATGCGCCGCCCGTGGCGCGCGTATTCG GCGATGTGCAGCGCGTGCCCGAGCCGTTGCTGCTGTGGTTCCATCATGTGCGGTGGGATCACCGCATGGCCTCCGGCAGG CCGCTGTGGGACGAGCTGGTGTGGCGTTACGACCATGGCGTGGCCGAGGTCGCTGCGATGCGCACGACCTGGCAAGGCCT GGCCGGCAAGATCGATGCACAGCGCTACCAGCAGGTCGCCGATTTCCTGGCGATCCAGCAGCGTGAAGCGCAGTGGTGGC GCGATGCCAGCATCGCCTATTTCCAGAACGTGTCCGGGCGCCCGTTGCCTGCAGGCGTCAGCCCGCCGGCGCACCCGCTG GCGTATTACCAGGCACTGACATTTCCGTATGCACCGGGGAATCCGAAGTGA
Upstream 100 bases:
>100_bases GGACGCCGAGTGCAGGTATGACAGTGCGAGCCATGGTACCGGGAAGCAGGCAGAGCGGCGATATGCGCCTGCATGCGTCC GTGACGCTCGAGCATGCCGC
Downstream 100 bases:
>100_bases GCGCATGTCGCGTAAAGATAGTGATCGGCACGCTGTCGGCGTTGCTGCTGCCGCAACTTGCGAGCGCAACGGATGCGCCG CTACTGCATCCCATTTTTCA
Product: alpha-glucuronidase
Products: NA
Alternate protein names: Alpha-glucosiduronase [H]
Number of amino acids: Translated: 736; Mature: 735
Protein sequence:
>736_residues MSGSAMKRHGIGTGAITLPALMWLALLCSGLLVTASAHAEDGYDLWLRYQPLANAAQLRDSASQLVVVGDSPTLHAARDE LARGLQGLLGSTPPRVDAVTQDGALVLGAASAPQIAALKLNAGQLGRDGYLIRSAEIDGHRVTAIVGGSDIGVLYGTFHL LRLLQTGQSLAALDVRTSPRLQLRMLNHWDNLDGLVERGYAGASLWNWQTLPGYLDPRYTDYARANASLGINGTVLNNVN ANAWSLTPQYLDKAAALANVFRPYGIAVFLSARFSAPIEIGGLKTADPLDPQVQRWWRDTADAIYARIPDFGGFLVKANS EGQPGPQDYGRSHADGANLLADALAPHGGVVMWRAFVYSHEQPDDRAKQAYSEFVPLDGAFADNVIVQVKNGAIDFQPRE PFHPLFGAMRKTPLMPEFQITKEYLGFSTHLAYLGPLFSETLQADTYARGKGSTVAKTVDGRLFPESKRTRLTGIAGVAN IGADHNWSGSIFDQANWYAYGRLAWDPQLSPQAIAQEWARMTFSNDPAVVEPVVGMMLRSREAVVDYMTPLGLHHLMGRG HHYGPAPWDAGSERPDWDPVYYHRADRNGIGFDRSASGSNAVAQYAPPVARVFGDVQRVPEPLLLWFHHVRWDHRMASGR PLWDELVWRYDHGVAEVAAMRTTWQGLAGKIDAQRYQQVADFLAIQQREAQWWRDASIAYFQNVSGRPLPAGVSPPAHPL AYYQALTFPYAPGNPK
Sequences:
>Translated_736_residues MSGSAMKRHGIGTGAITLPALMWLALLCSGLLVTASAHAEDGYDLWLRYQPLANAAQLRDSASQLVVVGDSPTLHAARDE LARGLQGLLGSTPPRVDAVTQDGALVLGAASAPQIAALKLNAGQLGRDGYLIRSAEIDGHRVTAIVGGSDIGVLYGTFHL LRLLQTGQSLAALDVRTSPRLQLRMLNHWDNLDGLVERGYAGASLWNWQTLPGYLDPRYTDYARANASLGINGTVLNNVN ANAWSLTPQYLDKAAALANVFRPYGIAVFLSARFSAPIEIGGLKTADPLDPQVQRWWRDTADAIYARIPDFGGFLVKANS EGQPGPQDYGRSHADGANLLADALAPHGGVVMWRAFVYSHEQPDDRAKQAYSEFVPLDGAFADNVIVQVKNGAIDFQPRE PFHPLFGAMRKTPLMPEFQITKEYLGFSTHLAYLGPLFSETLQADTYARGKGSTVAKTVDGRLFPESKRTRLTGIAGVAN IGADHNWSGSIFDQANWYAYGRLAWDPQLSPQAIAQEWARMTFSNDPAVVEPVVGMMLRSREAVVDYMTPLGLHHLMGRG HHYGPAPWDAGSERPDWDPVYYHRADRNGIGFDRSASGSNAVAQYAPPVARVFGDVQRVPEPLLLWFHHVRWDHRMASGR PLWDELVWRYDHGVAEVAAMRTTWQGLAGKIDAQRYQQVADFLAIQQREAQWWRDASIAYFQNVSGRPLPAGVSPPAHPL AYYQALTFPYAPGNPK >Mature_735_residues SGSAMKRHGIGTGAITLPALMWLALLCSGLLVTASAHAEDGYDLWLRYQPLANAAQLRDSASQLVVVGDSPTLHAARDEL ARGLQGLLGSTPPRVDAVTQDGALVLGAASAPQIAALKLNAGQLGRDGYLIRSAEIDGHRVTAIVGGSDIGVLYGTFHLL RLLQTGQSLAALDVRTSPRLQLRMLNHWDNLDGLVERGYAGASLWNWQTLPGYLDPRYTDYARANASLGINGTVLNNVNA NAWSLTPQYLDKAAALANVFRPYGIAVFLSARFSAPIEIGGLKTADPLDPQVQRWWRDTADAIYARIPDFGGFLVKANSE GQPGPQDYGRSHADGANLLADALAPHGGVVMWRAFVYSHEQPDDRAKQAYSEFVPLDGAFADNVIVQVKNGAIDFQPREP FHPLFGAMRKTPLMPEFQITKEYLGFSTHLAYLGPLFSETLQADTYARGKGSTVAKTVDGRLFPESKRTRLTGIAGVANI GADHNWSGSIFDQANWYAYGRLAWDPQLSPQAIAQEWARMTFSNDPAVVEPVVGMMLRSREAVVDYMTPLGLHHLMGRGH HYGPAPWDAGSERPDWDPVYYHRADRNGIGFDRSASGSNAVAQYAPPVARVFGDVQRVPEPLLLWFHHVRWDHRMASGRP LWDELVWRYDHGVAEVAAMRTTWQGLAGKIDAQRYQQVADFLAIQQREAQWWRDASIAYFQNVSGRPLPAGVSPPAHPLA YYQALTFPYAPGNPK
Specific function: Releases 4-O-methylglucuronic acid from substituted xylo-oligosaccharides [H]
COG id: COG3661
COG function: function code G; Alpha-glucuronidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 67 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011395 - InterPro: IPR005154 - InterPro: IPR011099 - InterPro: IPR011100 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF07477 Glyco_hydro_67C; PF07488 Glyco_hydro_67M; PF03648 Glyco_hydro_67N [H]
EC number: =3.2.1.139 [H]
Molecular weight: Translated: 80685; Mature: 80554
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSAMKRHGIGTGAITLPALMWLALLCSGLLVTASAHAEDGYDLWLRYQPLANAAQLRD CCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCHHHHHC SASQLVVVGDSPTLHAARDELARGLQGLLGSTPPRVDAVTQDGALVLGAASAPQIAALKL CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCEEEEEE NAGQLGRDGYLIRSAEIDGHRVTAIVGGSDIGVLYGTFHLLRLLQTGQSLAALDVRTSPR CCCCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC LQLRMLNHWDNLDGLVERGYAGASLWNWQTLPGYLDPRYTDYARANASLGINGTVLNNVN EEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECCCC ANAWSLTPQYLDKAAALANVFRPYGIAVFLSARFSAPIEIGGLKTADPLDPQVQRWWRDT CCEEECCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHH ADAIYARIPDFGGFLVKANSEGQPGPQDYGRSHADGANLLADALAPHGGVVMWRAFVYSH HHHHHHHCCCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCC EQPDDRAKQAYSEFVPLDGAFADNVIVQVKNGAIDFQPREPFHPLFGAMRKTPLMPEFQI CCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHCCCCCCCHHH TKEYLGFSTHLAYLGPLFSETLQADTYARGKGSTVAKTVDGRLFPESKRTRLTGIAGVAN HHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHH IGADHNWSGSIFDQANWYAYGRLAWDPQLSPQAIAQEWARMTFSNDPAVVEPVVGMMLRS CCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH REAVVDYMTPLGLHHLMGRGHHYGPAPWDAGSERPDWDPVYYHRADRNGIGFDRSASGSN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC AVAQYAPPVARVFGDVQRVPEPLLLWFHHVRWDHRMASGRPLWDELVWRYDHGVAEVAAM CHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH RTTWQGLAGKIDAQRYQQVADFLAIQQREAQWWRDASIAYFQNVSGRPLPAGVSPPAHPL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHH AYYQALTFPYAPGNPK HHHHHHCCCCCCCCCC >Mature Secondary Structure SGSAMKRHGIGTGAITLPALMWLALLCSGLLVTASAHAEDGYDLWLRYQPLANAAQLRD CCCCCHHCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCCCHHHHHC SASQLVVVGDSPTLHAARDELARGLQGLLGSTPPRVDAVTQDGALVLGAASAPQIAALKL CCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCEEEEECCCCCCEEEEEE NAGQLGRDGYLIRSAEIDGHRVTAIVGGSDIGVLYGTFHLLRLLQTGQSLAALDVRTSPR CCCCCCCCCEEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCC LQLRMLNHWDNLDGLVERGYAGASLWNWQTLPGYLDPRYTDYARANASLGINGTVLNNVN EEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCEEECCCC ANAWSLTPQYLDKAAALANVFRPYGIAVFLSARFSAPIEIGGLKTADPLDPQVQRWWRDT CCEEECCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHH ADAIYARIPDFGGFLVKANSEGQPGPQDYGRSHADGANLLADALAPHGGVVMWRAFVYSH HHHHHHHCCCCCCEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCC EQPDDRAKQAYSEFVPLDGAFADNVIVQVKNGAIDFQPREPFHPLFGAMRKTPLMPEFQI CCCHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCCCCCCHHHHHHHCCCCCCCHHH TKEYLGFSTHLAYLGPLFSETLQADTYARGKGSTVAKTVDGRLFPESKRTRLTGIAGVAN HHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCEEHHHHHHHH IGADHNWSGSIFDQANWYAYGRLAWDPQLSPQAIAQEWARMTFSNDPAVVEPVVGMMLRS CCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH REAVVDYMTPLGLHHLMGRGHHYGPAPWDAGSERPDWDPVYYHRADRNGIGFDRSASGSN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC AVAQYAPPVARVFGDVQRVPEPLLLWFHHVRWDHRMASGRPLWDELVWRYDHGVAEVAAM CHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHH RTTWQGLAGKIDAQRYQQVADFLAIQQREAQWWRDASIAYFQNVSGRPLPAGVSPPAHPL HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCHH AYYQALTFPYAPGNPK HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9044261; 10360571 [H]