Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244945
Identifier: 21244945
GI number: 21244945
Start: 4989483
End: 4991447
Strand: Direct
Name: 21244945
Synonym: XAC4228
Alternate gene names: NA
Gene position: 4989483-4991447 (Clockwise)
Preceding gene: 21244944
Following gene: 21244946
Centisome position: 96.4
GC content: 68.45
Gene sequence:
>1965_bases GTGAGCGCATGTCGCGTAAAGATAGTGATCGGCACGCTGTCGGCGTTGCTGCTGCCGCAACTTGCGAGCGCAACGGATGC GCCGCTACTGCATCCCATTTTTCAGGACCATGCGGTGCTGCAACGCGATGCGCCGATCCGCCTGTGGGGCGATGCGGCGC CGGGCACACGTGTGACCGTGCAACTGGAGAGTACGCAGGTGCAGGCTCGCGCAGACCGGCAAGGTCACTGGGAAGCGCGC TTGCCCGCGCACGCCGCCGGCGGCCCGTACAGCCTGAAGGCCAGCGCTGCCAACGGTGCGATGCAGCAGATCGATGATGT GCTGATCGGCGATGTCTGGCTGTGCTCGGGGCAATCGAACATGGAATTGCAGGTGCATCGCACGCTGGATTCGCGCAGCG AGATCGCCGATGCCGACCACCCCAGCATCCGCATGTTCAAGGTGCCCGCACAATCCAGCCCGACACCGCAACGCGGTCTC GGCGGCACTGCAACGTGGCAGCGCACCACGCCGGAGACGGTCAAAGACTTTTCGGCTGCCTGTTATTACTTCGCACGCGA GTTGCAGAAGAAGATCGACGTGCCGATGGGGTTGATCAATGCGTCGTGGGGCGGTTCGCAACTGCAGGCCTGGATCGGCG ACAAGGCCCTGCGTGCCGCCGGCGACGATGGTCCGGCACTGGATGTGCTGGCGCGCTATGCAACCGACCCGGTCGCGGCC GCACCGCGTTGGGCCGCGCTGTGGGAACGCTGGTGGCGTGCCCATGGCGAAGGCGAACCGTGGCAGCCGGATGCGCCCGG CGACTGGCAGAGCGCGCCGTCGGCCTTGGGCGCATGGGACGACTGGGGCGTGCCGCAACTGGTCGGCTTCAACGGCATGG TCTGGTACCGCACCAGCGTCGAACTGACCCCGGCACAGGCCGCACAGGACGCCACGTTGCTACTCGGGCCGGTAGACGAA CTGGACCAGACCTGGGTCAACGGACGCGGCGTGGGCAGCAGCTACGGCGCGGACCAGCCGCGTCGCTACGCGTTGCCGCG CGGGCAGCTGCATGCCGGGCGCAACAGCATCGTGCTCAATGTGCTCAACACCTACCGGCGCGGCGGGCTGCTGGGCGACG CGCCATCGCGCGCACTGCAATTTGCAGACGGCAGCACCGTGGCGCTGGACGCGCCCTGGCAATACCGCATCGTGCCGCAG GCAGTGGGCACGCCACCGCGCGCACCGTGGTCGTCGGCGGCCGGGCTGACCACCTTGTACAACGGCATGATCGCGCCGCT GGAACACCTGGGCCTGCGCGGCGTGCTGTGGTACCAGGGCGAATCCAATACCGGCGATGCAGCGCGCTACCCGGCCTTGC TCACTGCCTGGCAGCGCGACTGGCGGCAGCGCTTCGGCGCAGACCTGCCGCTGCTGGTGGTGCAGCTGGCCAATTACGGC GCACCGCCTACCCAGCCAACCGACAGCGGTTGGGCGCAATTGCGCGAGGCGCAGCGGCGTTTCGTGGCCAGCGACGCGCA CGCAGGGTTGGCGGTGGCGATCGATATCGGCGACCGCTACGACATCCATCCGGCCAACAAGCAGGAGCTGGGCCGACGCC TGGCGCGCGCGGCGCGGCACGTGGTGTATGGCGAAGCGATTGCACCTTCCGGCCCGGTCGCGCGCAACGCGCGCCGCGAG GGCGAGAGCGTGCGCATTGGCTTCGACGATGTCGACACCGCGCTGGTGAGTTACGGCAACGACGCGCCGATCGGCTTCGA GCTCTGCGGCGATGCGGCCGGCAGCTGCCGTTACGCCAGCGCCACGCTGTCCGGGCGCGAGATCGGCCTGCGTCTTCCTG CCGGCGTGCAGGCCACACGGGTGCGTTACTGCTGGGCCGACAGCCCTGTGTGCACCCTGTACGACCGCAGCGGCCTACCG GCCGGCCCGTTCGAATTTCCCATCACTGCCACCTCTTCCCCCTGA
Upstream 100 bases:
>100_bases ACGTGTCCGGGCGCCCGTTGCCTGCAGGCGTCAGCCCGCCGGCGCACCCGCTGGCGTATTACCAGGCACTGACATTTCCG TATGCACCGGGGAATCCGAA
Downstream 100 bases:
>100_bases GCGAGATCACGATGTCACAGACTTCCGACTCCCCTGCACCGCTGCAAGGCTCTGCCCGCGACCGCGAGATCGTCGAGGCG CGCGTCATCGTCACCTGCCC
Product: sialic acid-specific 9-O-acetylesterase
Products: NA
Alternate protein names: Sialic Acid-Specific 9-O-Acetylesterase; Conserved Domain Protein; Hydrolase Protein; Sialic Acid-Specific 9-O-Acetylesterase-Like Protein; Secreted Protein; Sialic-Acid O-Acetylesterase; LPXTG-Motif Cell Wall Anchor Domain-Containing Protein; Glycoside Hydrolase Family Protein; Acetyl-Xylan Esterase; Sialic Acidspecific 9-O-Acetylesterase; Alpha-L-Fucosidase; Sialate O-Acetylesterase Homolog; Glycosyl Hydrolase
Number of amino acids: Translated: 654; Mature: 653
Protein sequence:
>654_residues MSACRVKIVIGTLSALLLPQLASATDAPLLHPIFQDHAVLQRDAPIRLWGDAAPGTRVTVQLESTQVQARADRQGHWEAR LPAHAAGGPYSLKASAANGAMQQIDDVLIGDVWLCSGQSNMELQVHRTLDSRSEIADADHPSIRMFKVPAQSSPTPQRGL GGTATWQRTTPETVKDFSAACYYFARELQKKIDVPMGLINASWGGSQLQAWIGDKALRAAGDDGPALDVLARYATDPVAA APRWAALWERWWRAHGEGEPWQPDAPGDWQSAPSALGAWDDWGVPQLVGFNGMVWYRTSVELTPAQAAQDATLLLGPVDE LDQTWVNGRGVGSSYGADQPRRYALPRGQLHAGRNSIVLNVLNTYRRGGLLGDAPSRALQFADGSTVALDAPWQYRIVPQ AVGTPPRAPWSSAAGLTTLYNGMIAPLEHLGLRGVLWYQGESNTGDAARYPALLTAWQRDWRQRFGADLPLLVVQLANYG APPTQPTDSGWAQLREAQRRFVASDAHAGLAVAIDIGDRYDIHPANKQELGRRLARAARHVVYGEAIAPSGPVARNARRE GESVRIGFDDVDTALVSYGNDAPIGFELCGDAAGSCRYASATLSGREIGLRLPAGVQATRVRYCWADSPVCTLYDRSGLP AGPFEFPITATSSP
Sequences:
>Translated_654_residues MSACRVKIVIGTLSALLLPQLASATDAPLLHPIFQDHAVLQRDAPIRLWGDAAPGTRVTVQLESTQVQARADRQGHWEAR LPAHAAGGPYSLKASAANGAMQQIDDVLIGDVWLCSGQSNMELQVHRTLDSRSEIADADHPSIRMFKVPAQSSPTPQRGL GGTATWQRTTPETVKDFSAACYYFARELQKKIDVPMGLINASWGGSQLQAWIGDKALRAAGDDGPALDVLARYATDPVAA APRWAALWERWWRAHGEGEPWQPDAPGDWQSAPSALGAWDDWGVPQLVGFNGMVWYRTSVELTPAQAAQDATLLLGPVDE LDQTWVNGRGVGSSYGADQPRRYALPRGQLHAGRNSIVLNVLNTYRRGGLLGDAPSRALQFADGSTVALDAPWQYRIVPQ AVGTPPRAPWSSAAGLTTLYNGMIAPLEHLGLRGVLWYQGESNTGDAARYPALLTAWQRDWRQRFGADLPLLVVQLANYG APPTQPTDSGWAQLREAQRRFVASDAHAGLAVAIDIGDRYDIHPANKQELGRRLARAARHVVYGEAIAPSGPVARNARRE GESVRIGFDDVDTALVSYGNDAPIGFELCGDAAGSCRYASATLSGREIGLRLPAGVQATRVRYCWADSPVCTLYDRSGLP AGPFEFPITATSSP >Mature_653_residues SACRVKIVIGTLSALLLPQLASATDAPLLHPIFQDHAVLQRDAPIRLWGDAAPGTRVTVQLESTQVQARADRQGHWEARL PAHAAGGPYSLKASAANGAMQQIDDVLIGDVWLCSGQSNMELQVHRTLDSRSEIADADHPSIRMFKVPAQSSPTPQRGLG GTATWQRTTPETVKDFSAACYYFARELQKKIDVPMGLINASWGGSQLQAWIGDKALRAAGDDGPALDVLARYATDPVAAA PRWAALWERWWRAHGEGEPWQPDAPGDWQSAPSALGAWDDWGVPQLVGFNGMVWYRTSVELTPAQAAQDATLLLGPVDEL DQTWVNGRGVGSSYGADQPRRYALPRGQLHAGRNSIVLNVLNTYRRGGLLGDAPSRALQFADGSTVALDAPWQYRIVPQA VGTPPRAPWSSAAGLTTLYNGMIAPLEHLGLRGVLWYQGESNTGDAARYPALLTAWQRDWRQRFGADLPLLVVQLANYGA PPTQPTDSGWAQLREAQRRFVASDAHAGLAVAIDIGDRYDIHPANKQELGRRLARAARHVVYGEAIAPSGPVARNARREG ESVRIGFDDVDTALVSYGNDAPIGFELCGDAAGSCRYASATLSGREIGLRLPAGVQATRVRYCWADSPVCTLYDRSGLPA GPFEFPITATSSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI24850115, Length=208, Percent_Identity=32.6923076923077, Blast_Score=105, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70600; Mature: 70469
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSACRVKIVIGTLSALLLPQLASATDAPLLHPIFQDHAVLQRDAPIRLWGDAAPGTRVTV CCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCEEEEECCCCCCEEEE QLESTQVQARADRQGHWEARLPAHAAGGPYSLKASAANGAMQQIDDVLIGDVWLCSGQSN EEECCEEEEHHCCCCCCEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCC MELQVHRTLDSRSEIADADHPSIRMFKVPAQSSPTPQRGLGGTATWQRTTPETVKDFSAA CEEEEEECCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH CYYFARELQKKIDVPMGLINASWGGSQLQAWIGDKALRAAGDDGPALDVLARYATDPVAA HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCC APRWAALWERWWRAHGEGEPWQPDAPGDWQSAPSALGAWDDWGVPQLVGFNGMVWYRTSV CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEE ELTPAQAAQDATLLLGPVDELDQTWVNGRGVGSSYGADQPRRYALPRGQLHAGRNSIVLN EECHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEH VLNTYRRGGLLGDAPSRALQFADGSTVALDAPWQYRIVPQAVGTPPRAPWSSAAGLTTLY HHHHHHHCCCCCCCCHHHEEECCCCEEEEECCEEEEEEHHHCCCCCCCCCCCCCCHHHHH NGMIAPLEHLGLRGVLWYQGESNTGDAARYPALLTAWQRDWRQRFGADLPLLVVQLANYG HCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC APPTQPTDSGWAQLREAQRRFVASDAHAGLAVAIDIGDRYDIHPANKQELGRRLARAARH CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH VVYGEAIAPSGPVARNARREGESVRIGFDDVDTALVSYGNDAPIGFELCGDAAGSCRYAS HHCCCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCCCCCEEEE ATLSGREIGLRLPAGVQATRVRYCWADSPVCTLYDRSGLPAGPFEFPITATSSP EECCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEECCCC >Mature Secondary Structure SACRVKIVIGTLSALLLPQLASATDAPLLHPIFQDHAVLQRDAPIRLWGDAAPGTRVTV CCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHCCCCEEEEECCCCCCEEEE QLESTQVQARADRQGHWEARLPAHAAGGPYSLKASAANGAMQQIDDVLIGDVWLCSGQSN EEECCEEEEHHCCCCCCEECCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCC MELQVHRTLDSRSEIADADHPSIRMFKVPAQSSPTPQRGLGGTATWQRTTPETVKDFSAA CEEEEEECCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH CYYFARELQKKIDVPMGLINASWGGSQLQAWIGDKALRAAGDDGPALDVLARYATDPVAA HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCC APRWAALWERWWRAHGEGEPWQPDAPGDWQSAPSALGAWDDWGVPQLVGFNGMVWYRTSV CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEEEE ELTPAQAAQDATLLLGPVDELDQTWVNGRGVGSSYGADQPRRYALPRGQLHAGRNSIVLN EECHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEH VLNTYRRGGLLGDAPSRALQFADGSTVALDAPWQYRIVPQAVGTPPRAPWSSAAGLTTLY HHHHHHHCCCCCCCCHHHEEECCCCEEEEECCEEEEEEHHHCCCCCCCCCCCCCCHHHHH NGMIAPLEHLGLRGVLWYQGESNTGDAARYPALLTAWQRDWRQRFGADLPLLVVQLANYG HCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC APPTQPTDSGWAQLREAQRRFVASDAHAGLAVAIDIGDRYDIHPANKQELGRRLARAARH CCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH VVYGEAIAPSGPVARNARREGESVRIGFDDVDTALVSYGNDAPIGFELCGDAAGSCRYAS HHCCCCCCCCCCCHHHHHHCCCEEEEECCHHHHHHHHCCCCCCCCCEECCCCCCCCEEEE ATLSGREIGLRLPAGVQATRVRYCWADSPVCTLYDRSGLPAGPFEFPITATSSP EECCCCEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA