Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244717
Identifier: 21244717
GI number: 21244717
Start: 4691863
End: 4692978
Strand: Direct
Name: 21244717
Synonym: XAC3999
Alternate gene names: NA
Gene position: 4691863-4692978 (Clockwise)
Preceding gene: 21244716
Following gene: 21244721
Centisome position: 90.65
GC content: 68.91
Gene sequence:
>1116_bases ATGACGCGCCTGCTTGTGCTGGTCTGCGCCTGCCTGTGGCTGGCCGGCTGCTCCTCTTCTTCGACCTCGCTCAGCGAGCG CTTGGTTGCGCCCGGTGGCACCTCGCCACTGCTGGACGAAGAACGCATCGCCGCCACCATCGCCACGGTGCCCAACCGCA GCGGGCATGTGGTGACGCGCGATGGCGTGCCGATCTTCTGGCGCGCGATCGACCCCGGCCAGTACGCCATGCACTATCGC TACATGGGGCAGCGCACCGACCCGGCGCATGCGCTGGATGTGGATTTCAGTTTCAAGGCACCGACTGCCAAGCCGCCGGC GCCGCGCGGCACGGTGGTGCTGCTGCACGGCTGGATGATGGATGGCGACTCACTGCTGCCCTGGTCGCTGCAGCTTGCGC AGGCCGGCTACCGCGTGGTCACCATCGACCTGCGCAACCATGGCCATTCCGGCGGCGGGCCGTCCGGCTACGGCACGCGC GAGTCCGACGACGTCATCGATGTGCTCGACGCCCTGCAGCCGCGCGGCGAAATCCGCGGGCCGCTGTATCTGTTCGGCAT TTCCTACGGTGCCGCCACCGCGCTGTTTACGGCCGACAAACTCGGCCCGCGCGTGACCGGCGTGGTGGCGATGGAGTCCT TCGCCAATGCCGGGCGCGGCATCCGCGACATGGTGCCGCACCTGCTCGCCAGCCAGCCGCACGGGTGGCGTGGACGGGCG GTGGCGGCGTATGCACGCTGGCGCTATGCCGACCAGAATATCGACGCGGTGATTGCAGCGGCCGACACCCAGCTCAAGCT GGACCTGGACCGTGTCGATGTCGCGCACGCCCTGGCCGACACGCGCAGCTGCGTGCTGCTGTTGCACGGCGATGCCGATC AGCACATTCCGGTGGCGCATGGCCGTGCATTGGCCGTGGCCAGCGCGCGGGCGCATTACCTCGAACTGCCTGGCGAAAAC CATTTGAGCCTGCCACTACGGCTGGACTTGCTCGGCGGGCCCGTCGACCAATGGCTGGCGCAGGTGCAACAAGACCCCAG CCATTGCCCTGCACCGCAGGCGCTGCCCGCGTCCACGCTGGCAGTGGCCAGCCCGTTGGCGCCGCCGCGCAGTTGA
Upstream 100 bases:
>100_bases CGTATTGCAGGCTGTCATGGTTCTGTCACCGCAGTGCGGTAGATGCGCGGGCCGGGCAGGCCGTAGCCTGCTCGGCCGTT TGCTCCAACGATCGATCGCC
Downstream 100 bases:
>100_bases GCGCGGCAATCGCGCACGCTGACGCGAAGCAATCGCCCCATGAATGCCACACGCACTGCGTGCGGTGAGGCGCTGACTCA GCGCCTCACCACCGGCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 370
Protein sequence:
>371_residues MTRLLVLVCACLWLAGCSSSSTSLSERLVAPGGTSPLLDEERIAATIATVPNRSGHVVTRDGVPIFWRAIDPGQYAMHYR YMGQRTDPAHALDVDFSFKAPTAKPPAPRGTVVLLHGWMMDGDSLLPWSLQLAQAGYRVVTIDLRNHGHSGGGPSGYGTR ESDDVIDVLDALQPRGEIRGPLYLFGISYGAATALFTADKLGPRVTGVVAMESFANAGRGIRDMVPHLLASQPHGWRGRA VAAYARWRYADQNIDAVIAAADTQLKLDLDRVDVAHALADTRSCVLLLHGDADQHIPVAHGRALAVASARAHYLELPGEN HLSLPLRLDLLGGPVDQWLAQVQQDPSHCPAPQALPASTLAVASPLAPPRS
Sequences:
>Translated_371_residues MTRLLVLVCACLWLAGCSSSSTSLSERLVAPGGTSPLLDEERIAATIATVPNRSGHVVTRDGVPIFWRAIDPGQYAMHYR YMGQRTDPAHALDVDFSFKAPTAKPPAPRGTVVLLHGWMMDGDSLLPWSLQLAQAGYRVVTIDLRNHGHSGGGPSGYGTR ESDDVIDVLDALQPRGEIRGPLYLFGISYGAATALFTADKLGPRVTGVVAMESFANAGRGIRDMVPHLLASQPHGWRGRA VAAYARWRYADQNIDAVIAAADTQLKLDLDRVDVAHALADTRSCVLLLHGDADQHIPVAHGRALAVASARAHYLELPGEN HLSLPLRLDLLGGPVDQWLAQVQQDPSHCPAPQALPASTLAVASPLAPPRS >Mature_370_residues TRLLVLVCACLWLAGCSSSSTSLSERLVAPGGTSPLLDEERIAATIATVPNRSGHVVTRDGVPIFWRAIDPGQYAMHYRY MGQRTDPAHALDVDFSFKAPTAKPPAPRGTVVLLHGWMMDGDSLLPWSLQLAQAGYRVVTIDLRNHGHSGGGPSGYGTRE SDDVIDVLDALQPRGEIRGPLYLFGISYGAATALFTADKLGPRVTGVVAMESFANAGRGIRDMVPHLLASQPHGWRGRAV AAYARWRYADQNIDAVIAAADTQLKLDLDRVDVAHALADTRSCVLLLHGDADQHIPVAHGRALAVASARAHYLELPGENH LSLPLRLDLLGGPVDQWLAQVQQDPSHCPAPQALPASTLAVASPLAPPRS
Specific function: Unknown
COG id: COG1073
COG function: function code R; Hydrolases of the alpha/beta superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39696; Mature: 39564
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLLVLVCACLWLAGCSSSSTSLSERLVAPGGTSPLLDEERIAATIATVPNRSGHVVTR CHHHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCCCCHHHEEEEEECCCCCCCEEEE DGVPIFWRAIDPGQYAMHYRYMGQRTDPAHALDVDFSFKAPTAKPPAPRGTVVLLHGWMM CCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEE DGDSLLPWSLQLAQAGYRVVTIDLRNHGHSGGGPSGYGTRESDDVIDVLDALQPRGEIRG CCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC PLYLFGISYGAATALFTADKLGPRVTGVVAMESFANAGRGIRDMVPHLLASQPHGWRGRA CEEEEEECCCHHHHEEEHHHCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCE VAAYARWRYADQNIDAVIAAADTQLKLDLDRVDVAHALADTRSCVLLLHGDADQHIPVAH EEEEHHHEECCCCCCEEEEECCCEEEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC GRALAVASARAHYLELPGENHLSLPLRLDLLGGPVDQWLAQVQQDPSHCPAPQALPASTL CCEEEEECCCEEEEECCCCCCEECEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHH AVASPLAPPRS HHHCCCCCCCC >Mature Secondary Structure TRLLVLVCACLWLAGCSSSSTSLSERLVAPGGTSPLLDEERIAATIATVPNRSGHVVTR HHHHHHHHHHHHHHCCCCCCCHHHHHEECCCCCCCCCCCHHHEEEEEECCCCCCCEEEE DGVPIFWRAIDPGQYAMHYRYMGQRTDPAHALDVDFSFKAPTAKPPAPRGTVVLLHGWMM CCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEEEE DGDSLLPWSLQLAQAGYRVVTIDLRNHGHSGGGPSGYGTRESDDVIDVLDALQPRGEIRG CCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC PLYLFGISYGAATALFTADKLGPRVTGVVAMESFANAGRGIRDMVPHLLASQPHGWRGRA CEEEEEECCCHHHHEEEHHHCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCE VAAYARWRYADQNIDAVIAAADTQLKLDLDRVDVAHALADTRSCVLLLHGDADQHIPVAH EEEEHHHEECCCCCCEEEEECCCEEEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC GRALAVASARAHYLELPGENHLSLPLRLDLLGGPVDQWLAQVQQDPSHCPAPQALPASTL CCEEEEECCCEEEEECCCCCCEECEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHH AVASPLAPPRS HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA