Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244721
Identifier: 21244721
GI number: 21244721
Start: 4694845
End: 4695408
Strand: Direct
Name: 21244721
Synonym: XAC4002
Alternate gene names: NA
Gene position: 4694845-4695408 (Clockwise)
Preceding gene: 21244717
Following gene: 21244728
Centisome position: 90.71
GC content: 65.78
Gene sequence:
>564_bases GTGAGAGGAAGACATCGGAACAGTGCCAGTGCAGCGGAACCTTCAATTCTAGAGCACATGCCAAAGCCCACGCCGCACCT CGGTCGCGCTATGGTGCACTTCCCACCGCATCCGAGCGTGCATATGCAGTGTCCTCTTCGCTGGCTGGCCCTGGCCGCCT TGTTTGCAACGTCCGCCACGGCATTGGCGCGCGCACCCGAGCCGTGGGAACTCAGCGGCCGCAAGCTGATCGAAGCCGGA CTGGACGGATCGCTTGCGCCAGAAATCACCGCGCCAGAGCAACGCGAGTTCAAGGTGCTTGTCTCGGCCAGCCGCGCCGG CGCGTATCTGCTCGGCGTCGCCAGCGCCAGCTATCGCACCGGCTGGTGCATGCCTGCAGGCAACACCGGCTCGCCCGATC TGCAGGCGGTCATCGCCGATATCGGCGCGCTGCCCGATACACGCCAGGACCAAGCCGCACCTGACTTGATCGTCCAGGCG CTGGCAAAGCGCTATCCGTGCAGCGGCGGCGACAAGAGCACGCGTGCCGGCGGCGGCAATTCAGCCAATGCCGCCAAGCC GTAG
Upstream 100 bases:
>100_bases CCAGCGCGAATCGGATCGCCAGATAGGTCGAGCCCCACACCACGTAGACCAGCAACAAGGCGAGAACGACTAACCCGCTG CGCGCAGGCGCGGCAGCATC
Downstream 100 bases:
>100_bases GGCACGCCTATACGCAGTCGTTCAATGCCATGGCGTTGACCACAACGCCAGCATTTGTACCGCGCGACGACAAACGTCCC GAGCAGCTGCCTGATGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRGRHRNSASAAEPSILEHMPKPTPHLGRAMVHFPPHPSVHMQCPLRWLALAALFATSATALARAPEPWELSGRKLIEAG LDGSLAPEITAPEQREFKVLVSASRAGAYLLGVASASYRTGWCMPAGNTGSPDLQAVIADIGALPDTRQDQAAPDLIVQA LAKRYPCSGGDKSTRAGGGNSANAAKP
Sequences:
>Translated_187_residues MRGRHRNSASAAEPSILEHMPKPTPHLGRAMVHFPPHPSVHMQCPLRWLALAALFATSATALARAPEPWELSGRKLIEAG LDGSLAPEITAPEQREFKVLVSASRAGAYLLGVASASYRTGWCMPAGNTGSPDLQAVIADIGALPDTRQDQAAPDLIVQA LAKRYPCSGGDKSTRAGGGNSANAAKP >Mature_187_residues MRGRHRNSASAAEPSILEHMPKPTPHLGRAMVHFPPHPSVHMQCPLRWLALAALFATSATALARAPEPWELSGRKLIEAG LDGSLAPEITAPEQREFKVLVSASRAGAYLLGVASASYRTGWCMPAGNTGSPDLQAVIADIGALPDTRQDQAAPDLIVQA LAKRYPCSGGDKSTRAGGGNSANAAKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19620; Mature: 19620
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRHRNSASAAEPSILEHMPKPTPHLGRAMVHFPPHPSVHMQCPLRWLALAALFATSAT CCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHH ALARAPEPWELSGRKLIEAGLDGSLAPEITAPEQREFKVLVSASRAGAYLLGVASASYRT HHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCC GWCMPAGNTGSPDLQAVIADIGALPDTRQDQAAPDLIVQALAKRYPCSGGDKSTRAGGGN CEECCCCCCCCHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCC SANAAKP CCCCCCC >Mature Secondary Structure MRGRHRNSASAAEPSILEHMPKPTPHLGRAMVHFPPHPSVHMQCPLRWLALAALFATSAT CCCCCCCCCCCCCCHHHHHCCCCCCCCCCEEEECCCCCCEEEECCHHHHHHHHHHHHHHH ALARAPEPWELSGRKLIEAGLDGSLAPEITAPEQREFKVLVSASRAGAYLLGVASASYRT HHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCC GWCMPAGNTGSPDLQAVIADIGALPDTRQDQAAPDLIVQALAKRYPCSGGDKSTRAGGGN CEECCCCCCCCHHHHHHHHHHCCCCCCCCHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCC SANAAKP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA