Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is macB1 [H]
Identifier: 21244716
GI number: 21244716
Start: 4690493
End: 4691680
Strand: Direct
Name: macB1 [H]
Synonym: XAC3998
Alternate gene names: 21244716
Gene position: 4690493-4691680 (Clockwise)
Preceding gene: 21244715
Following gene: 21244717
Centisome position: 90.63
GC content: 67.68
Gene sequence:
>1188_bases GTGGCCACACGCAGCGGGCGGCTCTCGCTGGCTGCCGCACGCATCGGCATCGCCACGTTGCCGCAGCGCTGGGGGTCCAG CTCGGTGATCGTGGTCGGCATCGCCGGCGTGGTCGGCGTGCTGGTGGCGATGCTGGCGATGGGCCAAGGCTTCCAGGCCA CGCTCAACAGCACCGGCGACGAGACCACCGCGATCGTCCTGCGCGGCGGTTCGCAGGCGGAGACCAACTCGGTGATCACC CGCGACCTGGTGCCGCTGATCGGCAGCCTGCCCGGCATCACCGCCGATGCCAACGGCCGCCCGATGCTGTCGCCGGAACT CTCGCAAGTGGTGAACATCGCCTCCCGCTCCGACGGCACCGACGTCAACGCACAACTGCGTGGCGTGGGCGAACAGGCCT GGGCCGTGCATGACAAGGTCAAGATCGTGCAAGGCCGCCGCTTCAACACCGGCCTGCGCGAAATGGTGGTGGGCAAGGGC GCGTTGAACCAGTTCCGCGGACTGGAGCTGGGCAAGACACTCACGCTTGGCAGCCAGCAATGGACCGTGGTGGGCGTGTT CGCCTCCGGCGATGCGCACGATTCGGAGCTGTGGACCGACGCGCAGACGCTGGCCACCACCTACAACCGCAGCGCCTATC AGTCGATCAGCGCGCGCACCAACGGCAAGGCAGGCTTCAGCGCGTTCAAGACCGCCATGGCCGCCGATCCGCGGCTCAAG CTGGATGTGGGAACCACCCGCGCCTACTACGGCAAGCAGGGCGGCGGCTTGAACAAGTTGATCAACATCCTGGGCACGGT GATCGGGGCGATCATGGCAGTGGGCGCGGTATTCGGCGCGCTCAACACGATGTATGCGGCGGTGGCCACGCGCGCGCGCG AGATCGCCACCATGCGTGCGATCGGCTTCCGTGGCACGCCGGTGATCATGGCGCTGATGCTGGAAACCATGCTGCTGGCA CTGCTGGGCGGGCTGCTGGGCGGGGCGATCGCCTGGGCGGTGTTCAACGGCTACACCGTCTCCACGCTGGGCAGCAACTT CAGCCAGGTGGTATTCCAGTTCAAGGTCTCGCCGGAGCTGCTGTGGAGCGGGCTGAAATGGGCGCTGGGCATCGGCCTGG TGGGCGGGCTGTTTCCCGCGCTGCGTGCCGCGCGTCTGCCGATTACCACGGCGTTGCGTGAGGTGTAG
Upstream 100 bases:
>100_bases CGCGCTGTCGGTCGTGCTGCTGGCAATCGGGCTGGCTGCCTGGATCGCACTGCCGTGGTTGGTGCTGCTGCCGATCGGTG GATTGCTGGCGGTGTGGCTG
Downstream 100 bases:
>100_bases GCGGGTGTTGGCCCGCCGCGAATCGGGAATCGGGAATGGTGACAGCCGCGGCAGACCCGCGGCGGCGGCGGCGGCGGCTG AACGTATTGCAGGCTGTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MATRSGRLSLAAARIGIATLPQRWGSSSVIVVGIAGVVGVLVAMLAMGQGFQATLNSTGDETTAIVLRGGSQAETNSVIT RDLVPLIGSLPGITADANGRPMLSPELSQVVNIASRSDGTDVNAQLRGVGEQAWAVHDKVKIVQGRRFNTGLREMVVGKG ALNQFRGLELGKTLTLGSQQWTVVGVFASGDAHDSELWTDAQTLATTYNRSAYQSISARTNGKAGFSAFKTAMAADPRLK LDVGTTRAYYGKQGGGLNKLINILGTVIGAIMAVGAVFGALNTMYAAVATRAREIATMRAIGFRGTPVIMALMLETMLLA LLGGLLGGAIAWAVFNGYTVSTLGSNFSQVVFQFKVSPELLWSGLKWALGIGLVGGLFPALRAARLPITTALREV
Sequences:
>Translated_395_residues MATRSGRLSLAAARIGIATLPQRWGSSSVIVVGIAGVVGVLVAMLAMGQGFQATLNSTGDETTAIVLRGGSQAETNSVIT RDLVPLIGSLPGITADANGRPMLSPELSQVVNIASRSDGTDVNAQLRGVGEQAWAVHDKVKIVQGRRFNTGLREMVVGKG ALNQFRGLELGKTLTLGSQQWTVVGVFASGDAHDSELWTDAQTLATTYNRSAYQSISARTNGKAGFSAFKTAMAADPRLK LDVGTTRAYYGKQGGGLNKLINILGTVIGAIMAVGAVFGALNTMYAAVATRAREIATMRAIGFRGTPVIMALMLETMLLA LLGGLLGGAIAWAVFNGYTVSTLGSNFSQVVFQFKVSPELLWSGLKWALGIGLVGGLFPALRAARLPITTALREV >Mature_394_residues ATRSGRLSLAAARIGIATLPQRWGSSSVIVVGIAGVVGVLVAMLAMGQGFQATLNSTGDETTAIVLRGGSQAETNSVITR DLVPLIGSLPGITADANGRPMLSPELSQVVNIASRSDGTDVNAQLRGVGEQAWAVHDKVKIVQGRRFNTGLREMVVGKGA LNQFRGLELGKTLTLGSQQWTVVGVFASGDAHDSELWTDAQTLATTYNRSAYQSISARTNGKAGFSAFKTAMAADPRLKL DVGTTRAYYGKQGGGLNKLINILGTVIGAIMAVGAVFGALNTMYAAVATRAREIATMRAIGFRGTPVIMALMLETMLLAL LGGLLGGAIAWAVFNGYTVSTLGSNFSQVVFQFKVSPELLWSGLKWALGIGLVGGLFPALRAARLPITTALREV
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 41283; Mature: 41152
Theoretical pI: Translated: 10.91; Mature: 10.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRSGRLSLAAARIGIATLPQRWGSSSVIVVGIAGVVGVLVAMLAMGQGFQATLNSTGD CCCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEHHCCCCC ETTAIVLRGGSQAETNSVITRDLVPLIGSLPGITADANGRPMLSPELSQVVNIASRSDGT CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC DVNAQLRGVGEQAWAVHDKVKIVQGRRFNTGLREMVVGKGALNQFRGLELGKTLTLGSQQ CCCHHHHCCCHHHHHHHHHHHEECCCCCCCHHHHHHHCCHHHHHHCCCCCCCEEEECCCC WTVVGVFASGDAHDSELWTDAQTLATTYNRSAYQSISARTNGKAGFSAFKTAMAADPRLK EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEE LDVGTTRAYYGKQGGGLNKLINILGTVIGAIMAVGAVFGALNTMYAAVATRAREIATMRA EECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGFRGTPVIMALMLETMLLALLGGLLGGAIAWAVFNGYTVSTLGSNFSQVVFQFKVSPEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHCCCHHHHHEEEECCHHH LWSGLKWALGIGLVGGLFPALRAARLPITTALREV HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC >Mature Secondary Structure ATRSGRLSLAAARIGIATLPQRWGSSSVIVVGIAGVVGVLVAMLAMGQGFQATLNSTGD CCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCCEEHHCCCCC ETTAIVLRGGSQAETNSVITRDLVPLIGSLPGITADANGRPMLSPELSQVVNIASRSDGT CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC DVNAQLRGVGEQAWAVHDKVKIVQGRRFNTGLREMVVGKGALNQFRGLELGKTLTLGSQQ CCCHHHHCCCHHHHHHHHHHHEECCCCCCCHHHHHHHCCHHHHHHCCCCCCCEEEECCCC WTVVGVFASGDAHDSELWTDAQTLATTYNRSAYQSISARTNGKAGFSAFKTAMAADPRLK EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEE LDVGTTRAYYGKQGGGLNKLINILGTVIGAIMAVGAVFGALNTMYAAVATRAREIATMRA EECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGFRGTPVIMALMLETMLLALLGGLLGGAIAWAVFNGYTVSTLGSNFSQVVFQFKVSPEL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHCCCHHHHHEEEECCHHH LWSGLKWALGIGLVGGLFPALRAARLPITTALREV HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA