Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21244391

Identifier: 21244391

GI number: 21244391

Start: 4344471

End: 4345133

Strand: Direct

Name: 21244391

Synonym: XAC3666

Alternate gene names: NA

Gene position: 4344471-4345133 (Clockwise)

Preceding gene: 21244389

Following gene: 21244396

Centisome position: 83.94

GC content: 56.56

Gene sequence:

>663_bases
TTGTCACGCCAAAGACCCAGAAAGCGTGTTGCCGACACCGCGGGCGATTGCGATGGCGCACGGGCCGCCAGCCATGCGCG
CCCATGTCGCAGCGACGCGTTCGCGATCCCGGACGGCTTTACCAGGGAGCAGATCCAGCCATTTCACGATCTGGAACGAC
AATACGCCACGCTGTTCCAAACATCCCATGTCTGCGCAGTCCAATCTGCACGCGACATCCAAGCCAGCCGGACAATGGAT
GTGGAGATGGACGAATGTGCCGTCATCAATCTCGCGCACGATGGATTTGATTCGATCGGCACGCACGGCTTGTCTTCATG
CGTCTGCATTTGTGCGAAAGGAAAGAATCCTCGCGGCCACGACATCCTGGGCCTGCTGCATTATTCCGGAATACAGGATG
CACAGGATGCGCTTTCCGAAATCCGGGACGATATGCGGGAAGAAGGCGTGCAAGAACCCGAAATATTCCTGGTAGGCGGC
ATGATCTCCAACCAAGACGAGCTGGGCAGCTTCGAAATCGAGAGAGATCTGCTGGCGCTGCAGCGCCCCTTCAATATCGT
AGGCGCCAAACTTCATCCCAGCATGAGCGATCGCAATGGTGAGGAAAATGCCATCAACCTGGTCATGACGGCCAGTGGCA
TCTACTACTACAAGTCGTGGTAA

Upstream 100 bases:

>100_bases
CACATCCACCAGCACCACCTACACTGCGGAGCCGCCGCCGTCGGCCGATCCAGCCGACGGGAGTGCGGCATGGCCAGCGC
CCCATCCCGATTGCCAGGGG

Downstream 100 bases:

>100_bases
AGACGCCTCGATGCGAAGGCGCCGCCTGCGCTCAAAACGCCGGCAGCACCGCGCCCTTGTACTTCTGCTCGATAAAGGCT
TTCACTTCTGGGCTGGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSRQRPRKRVADTAGDCDGARAASHARPCRSDAFAIPDGFTREQIQPFHDLERQYATLFQTSHVCAVQSARDIQASRTMD
VEMDECAVINLAHDGFDSIGTHGLSSCVCICAKGKNPRGHDILGLLHYSGIQDAQDALSEIRDDMREEGVQEPEIFLVGG
MISNQDELGSFEIERDLLALQRPFNIVGAKLHPSMSDRNGEENAINLVMTASGIYYYKSW

Sequences:

>Translated_220_residues
MSRQRPRKRVADTAGDCDGARAASHARPCRSDAFAIPDGFTREQIQPFHDLERQYATLFQTSHVCAVQSARDIQASRTMD
VEMDECAVINLAHDGFDSIGTHGLSSCVCICAKGKNPRGHDILGLLHYSGIQDAQDALSEIRDDMREEGVQEPEIFLVGG
MISNQDELGSFEIERDLLALQRPFNIVGAKLHPSMSDRNGEENAINLVMTASGIYYYKSW
>Mature_219_residues
SRQRPRKRVADTAGDCDGARAASHARPCRSDAFAIPDGFTREQIQPFHDLERQYATLFQTSHVCAVQSARDIQASRTMDV
EMDECAVINLAHDGFDSIGTHGLSSCVCICAKGKNPRGHDILGLLHYSGIQDAQDALSEIRDDMREEGVQEPEIFLVGGM
ISNQDELGSFEIERDLLALQRPFNIVGAKLHPSMSDRNGEENAINLVMTASGIYYYKSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24376; Mature: 24244

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQRPRKRVADTAGDCDGARAASHARPCRSDAFAIPDGFTREQIQPFHDLERQYATLFQ
CCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHH
TSHVCAVQSARDIQASRTMDVEMDECAVINLAHDGFDSIGTHGLSSCVCICAKGKNPRGH
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCCHHHEEEEEECCCCCCCC
DILGLLHYSGIQDAQDALSEIRDDMREEGVQEPEIFLVGGMISNQDELGSFEIERDLLAL
HHEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEECCCHHCCCCHHHHHHHHH
QRPFNIVGAKLHPSMSDRNGEENAINLVMTASGIYYYKSW
HCCHHHCCCEECCCCCCCCCCCCEEEEEEEECCEEEEECC
>Mature Secondary Structure 
SRQRPRKRVADTAGDCDGARAASHARPCRSDAFAIPDGFTREQIQPFHDLERQYATLFQ
CCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHH
TSHVCAVQSARDIQASRTMDVEMDECAVINLAHDGFDSIGTHGLSSCVCICAKGKNPRGH
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCCHHHEEEEEECCCCCCCC
DILGLLHYSGIQDAQDALSEIRDDMREEGVQEPEIFLVGGMISNQDELGSFEIERDLLAL
HHEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEECCCHHCCCCHHHHHHHHH
QRPFNIVGAKLHPSMSDRNGEENAINLVMTASGIYYYKSW
HCCHHHCCCEECCCCCCCCCCCCEEEEEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA