Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244391
Identifier: 21244391
GI number: 21244391
Start: 4344471
End: 4345133
Strand: Direct
Name: 21244391
Synonym: XAC3666
Alternate gene names: NA
Gene position: 4344471-4345133 (Clockwise)
Preceding gene: 21244389
Following gene: 21244396
Centisome position: 83.94
GC content: 56.56
Gene sequence:
>663_bases TTGTCACGCCAAAGACCCAGAAAGCGTGTTGCCGACACCGCGGGCGATTGCGATGGCGCACGGGCCGCCAGCCATGCGCG CCCATGTCGCAGCGACGCGTTCGCGATCCCGGACGGCTTTACCAGGGAGCAGATCCAGCCATTTCACGATCTGGAACGAC AATACGCCACGCTGTTCCAAACATCCCATGTCTGCGCAGTCCAATCTGCACGCGACATCCAAGCCAGCCGGACAATGGAT GTGGAGATGGACGAATGTGCCGTCATCAATCTCGCGCACGATGGATTTGATTCGATCGGCACGCACGGCTTGTCTTCATG CGTCTGCATTTGTGCGAAAGGAAAGAATCCTCGCGGCCACGACATCCTGGGCCTGCTGCATTATTCCGGAATACAGGATG CACAGGATGCGCTTTCCGAAATCCGGGACGATATGCGGGAAGAAGGCGTGCAAGAACCCGAAATATTCCTGGTAGGCGGC ATGATCTCCAACCAAGACGAGCTGGGCAGCTTCGAAATCGAGAGAGATCTGCTGGCGCTGCAGCGCCCCTTCAATATCGT AGGCGCCAAACTTCATCCCAGCATGAGCGATCGCAATGGTGAGGAAAATGCCATCAACCTGGTCATGACGGCCAGTGGCA TCTACTACTACAAGTCGTGGTAA
Upstream 100 bases:
>100_bases CACATCCACCAGCACCACCTACACTGCGGAGCCGCCGCCGTCGGCCGATCCAGCCGACGGGAGTGCGGCATGGCCAGCGC CCCATCCCGATTGCCAGGGG
Downstream 100 bases:
>100_bases AGACGCCTCGATGCGAAGGCGCCGCCTGCGCTCAAAACGCCGGCAGCACCGCGCCCTTGTACTTCTGCTCGATAAAGGCT TTCACTTCTGGGCTGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSRQRPRKRVADTAGDCDGARAASHARPCRSDAFAIPDGFTREQIQPFHDLERQYATLFQTSHVCAVQSARDIQASRTMD VEMDECAVINLAHDGFDSIGTHGLSSCVCICAKGKNPRGHDILGLLHYSGIQDAQDALSEIRDDMREEGVQEPEIFLVGG MISNQDELGSFEIERDLLALQRPFNIVGAKLHPSMSDRNGEENAINLVMTASGIYYYKSW
Sequences:
>Translated_220_residues MSRQRPRKRVADTAGDCDGARAASHARPCRSDAFAIPDGFTREQIQPFHDLERQYATLFQTSHVCAVQSARDIQASRTMD VEMDECAVINLAHDGFDSIGTHGLSSCVCICAKGKNPRGHDILGLLHYSGIQDAQDALSEIRDDMREEGVQEPEIFLVGG MISNQDELGSFEIERDLLALQRPFNIVGAKLHPSMSDRNGEENAINLVMTASGIYYYKSW >Mature_219_residues SRQRPRKRVADTAGDCDGARAASHARPCRSDAFAIPDGFTREQIQPFHDLERQYATLFQTSHVCAVQSARDIQASRTMDV EMDECAVINLAHDGFDSIGTHGLSSCVCICAKGKNPRGHDILGLLHYSGIQDAQDALSEIRDDMREEGVQEPEIFLVGGM ISNQDELGSFEIERDLLALQRPFNIVGAKLHPSMSDRNGEENAINLVMTASGIYYYKSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24376; Mature: 24244
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRQRPRKRVADTAGDCDGARAASHARPCRSDAFAIPDGFTREQIQPFHDLERQYATLFQ CCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHH TSHVCAVQSARDIQASRTMDVEMDECAVINLAHDGFDSIGTHGLSSCVCICAKGKNPRGH HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCCHHHEEEEEECCCCCCCC DILGLLHYSGIQDAQDALSEIRDDMREEGVQEPEIFLVGGMISNQDELGSFEIERDLLAL HHEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEECCCHHCCCCHHHHHHHHH QRPFNIVGAKLHPSMSDRNGEENAINLVMTASGIYYYKSW HCCHHHCCCEECCCCCCCCCCCCEEEEEEEECCEEEEECC >Mature Secondary Structure SRQRPRKRVADTAGDCDGARAASHARPCRSDAFAIPDGFTREQIQPFHDLERQYATLFQ CCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCEECCCCCCHHHCCHHHHHHHHHHHHHH TSHVCAVQSARDIQASRTMDVEMDECAVINLAHDGFDSIGTHGLSSCVCICAKGKNPRGH HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHCCHHHEEEEEECCCCCCCC DILGLLHYSGIQDAQDALSEIRDDMREEGVQEPEIFLVGGMISNQDELGSFEIERDLLAL HHEEHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCEECCCHHCCCCHHHHHHHHH QRPFNIVGAKLHPSMSDRNGEENAINLVMTASGIYYYKSW HCCHHHCCCEECCCCCCCCCCCCEEEEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA