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The map label for this gene is ompW [H]

Identifier: 21244389

GI number: 21244389

Start: 4342359

End: 4343045

Strand: Direct

Name: ompW [H]

Synonym: XAC3664

Alternate gene names: 21244389

Gene position: 4342359-4343045 (Clockwise)

Preceding gene: 21244382

Following gene: 21244391

Centisome position: 83.9

GC content: 64.05

Gene sequence:

>687_bases
ATGCGTTCCATTTCCATCCTGAGCCTGGCTGCTGTATCTGCACTTGCGATTGCACCGTCCGCGTTCGCGCAGGACACCAC
CTATACCGGCGACACCTCCTCGACTTCTTCCAGCACGCTGTCCACCAGCGGCGATACCGCCTCCGGCAAGCATTGGGCCG
TGGTCGGTGGCGTGGCACTGCTGAACCCCAAGAACAACCCGGCTCCGGGCCTTGACGTCGATGGCGGCCCGGCACCGACG
CTGAGCGCCAGCTACTACATCAACGACAACTGGGCCGTCGAACTGTGGGGCGCAGCGGACAAGTTCAACCACCGTGTCAA
CGCCGATGGCGTGGGCAAGGTCGGTACCGTCGAGCAGCAGCCGATCGCCATCAGCGGTCAGTACCACTTCGGCGAAGCCG
ACAACGTGTTCCGTCCGTTCGTGGGCGTGGGCTACTACGAGTCGAACTTCAGCAACGAGAAGATCGACGCAGCGTCGACC
ACCGGCGATCACGTGGGCCTGAGCACCGCCAAGGGCGTCATCGGCACCGTTGGTGTGGACATGAACATCAACTCCACCTG
GTTCGCGCGTGCCGACGCCCGCTACATGCGTTCGCGTCCGGAACTGCGCGTGGGTGGCCAGGGCACCGGCAGCGAGCTGG
AACTGGATCCGTGGACCGTTGGCTTCGGCATCGGTGCGCGCTTCTAA

Upstream 100 bases:

>100_bases
GAAATTTTAGCGGGCCACAGGTGGGCGTGGATTCAGATTTTTAGGAATAGTTTTGGCGCGGCCCACTCCACGGGCCTAAC
AACAAGACGAGGAGACCCTC

Downstream 100 bases:

>100_bases
GCACGCCGCTGCCCGCCAGGGCTTTGGTTGAACAAAAACGGGCCGAAAGGCCCGTTTTTTGTGCGTGGTGCAAGCTGCGT
AAATTGCGGCCATCACGACC

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MRSISILSLAAVSALAIAPSAFAQDTTYTGDTSSTSSSTLSTSGDTASGKHWAVVGGVALLNPKNNPAPGLDVDGGPAPT
LSASYYINDNWAVELWGAADKFNHRVNADGVGKVGTVEQQPIAISGQYHFGEADNVFRPFVGVGYYESNFSNEKIDAAST
TGDHVGLSTAKGVIGTVGVDMNINSTWFARADARYMRSRPELRVGGQGTGSELELDPWTVGFGIGARF

Sequences:

>Translated_228_residues
MRSISILSLAAVSALAIAPSAFAQDTTYTGDTSSTSSSTLSTSGDTASGKHWAVVGGVALLNPKNNPAPGLDVDGGPAPT
LSASYYINDNWAVELWGAADKFNHRVNADGVGKVGTVEQQPIAISGQYHFGEADNVFRPFVGVGYYESNFSNEKIDAAST
TGDHVGLSTAKGVIGTVGVDMNINSTWFARADARYMRSRPELRVGGQGTGSELELDPWTVGFGIGARF
>Mature_228_residues
MRSISILSLAAVSALAIAPSAFAQDTTYTGDTSSTSSSTLSTSGDTASGKHWAVVGGVALLNPKNNPAPGLDVDGGPAPT
LSASYYINDNWAVELWGAADKFNHRVNADGVGKVGTVEQQPIAISGQYHFGEADNVFRPFVGVGYYESNFSNEKIDAAST
TGDHVGLSTAKGVIGTVGVDMNINSTWFARADARYMRSRPELRVGGQGTGSELELDPWTVGFGIGARF

Specific function: Acts As A Receptor For Colicin S4. [C]

COG id: COG3047

COG function: function code M; Outer membrane protein W

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OmpW/AlkL family [H]

Homologues:

Organism=Escherichia coli, GI1787510, Length=163, Percent_Identity=33.1288343558282, Blast_Score=82, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR005618 [H]

Pfam domain/function: PF03922 OmpW [H]

EC number: NA

Molecular weight: Translated: 23811; Mature: 23811

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSISILSLAAVSALAIAPSAFAQDTTYTGDTSSTSSSTLSTSGDTASGKHWAVVGGVAL
CCCCHHHHHHHHHHHHHCCCHHCCCCEECCCCCCCCCCEEECCCCCCCCCEEEEEEEEEE
LNPKNNPAPGLDVDGGPAPTLSASYYINDNWAVELWGAADKFNHRVNADGVGKVGTVEQQ
ECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCHHHCCCEECCCCCCCCCCCCCC
PIAISGQYHFGEADNVFRPFVGVGYYESNFSNEKIDAASTTGDHVGLSTAKGVIGTVGVD
CEEEECCEECCCCCCCCCCHHCCCEECCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEC
MNINSTWFARADARYMRSRPELRVGGQGTGSELELDPWTVGFGIGARF
CCCCCEEEECCCHHHHHCCCCEEECCCCCCCEEEECCEEEEECCCCCC
>Mature Secondary Structure
MRSISILSLAAVSALAIAPSAFAQDTTYTGDTSSTSSSTLSTSGDTASGKHWAVVGGVAL
CCCCHHHHHHHHHHHHHCCCHHCCCCEECCCCCCCCCCEEECCCCCCCCCEEEEEEEEEE
LNPKNNPAPGLDVDGGPAPTLSASYYINDNWAVELWGAADKFNHRVNADGVGKVGTVEQQ
ECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCHHHCCCEECCCCCCCCCCCCCC
PIAISGQYHFGEADNVFRPFVGVGYYESNFSNEKIDAASTTGDHVGLSTAKGVIGTVGVD
CEEEECCEECCCCCCCCCCHHCCCEECCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEC
MNINSTWFARADARYMRSRPELRVGGQGTGSELELDPWTVGFGIGARF
CCCCCEEEECCCHHHHHCCCCEEECCCCCCCEEEECCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]