Click here to switch to the map view.

The map label for this gene is yajQ [C]

Identifier: 21244396

GI number: 21244396

Start: 4349064

End: 4349549

Strand: Direct

Name: yajQ [C]

Synonym: XAC3671

Alternate gene names: 21244396

Gene position: 4349064-4349549 (Clockwise)

Preceding gene: 21244391

Following gene: 21244397

Centisome position: 84.03

GC content: 58.64

Gene sequence:

>486_bases
ATGCCTTCCTTCGACGTTGTGTCCGAAGTAGACAAGCACGAACTGACCAATGCGGTGGATCAGGCCAACCGCGAGCTGGA
CACACGTTTCGACTTCAAAGGCGTCGAGGCCAGGTTCGAGCTGGAAGACGGCAAGGTGATCAACCAGTCCGCGCCCAGCG
ATTTCCAGATCAAGCAGATGACCGACATCCTGCGCGCTCGGCTGCTGGCGCGCGGCATCGACATCCGATGCCTGGAATTT
GGCGATGTGGAAACCAATCTGGCCGGCGCGCGGCAGAAAGTGACCGTCAAGCAAGGCATCGAGCAGAAGCAGGCCAAGCA
GCTGGTGGCCAAGTTGAAGGAAGCCAAGCTCAAGGTCGAGGCACAGATCAATGGCGACAAGCTGCGCGTTACCGGAAAGA
AGCGCGACGATCTGCAGGACGCGATCGCGCTGCTGAAAAAGGCCGACTTCGAACTGCCGTTGCAGTTCGACAACTTCCGC
GATTGA

Upstream 100 bases:

>100_bases
TTATCGCCGCGGCACTGGCACGCCCGCCAATGCCGGCATGACGGCCGGCGCGGCACGATGGCCTAGAATGGCGGCTGTTT
TTCAATTGCAGGAGCTTTGC

Downstream 100 bases:

>100_bases
GTGCGTCTGGGTGATCGTAACGATCGGGACGGCACTGCCGGTGCGTGCAGTGCAGCCGGGTGAGCCGGATTGGCGTCTGC
GGCCCGCGCGCCGCACACCG

Product: nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPSFDVVSEVDKHELTNAVDQANRELDTRFDFKGVEARFELEDGKVINQSAPSDFQIKQMTDILRARLLARGIDIRCLEF
GDVETNLAGARQKVTVKQGIEQKQAKQLVAKLKEAKLKVEAQINGDKLRVTGKKRDDLQDAIALLKKADFELPLQFDNFR
D

Sequences:

>Translated_161_residues
MPSFDVVSEVDKHELTNAVDQANRELDTRFDFKGVEARFELEDGKVINQSAPSDFQIKQMTDILRARLLARGIDIRCLEF
GDVETNLAGARQKVTVKQGIEQKQAKQLVAKLKEAKLKVEAQINGDKLRVTGKKRDDLQDAIALLKKADFELPLQFDNFR
D
>Mature_160_residues
PSFDVVSEVDKHELTNAVDQANRELDTRFDFKGVEARFELEDGKVINQSAPSDFQIKQMTDILRARLLARGIDIRCLEFG
DVETNLAGARQKVTVKQGIEQKQAKQLVAKLKEAKLKVEAQINGDKLRVTGKKRDDLQDAIALLKKADFELPLQFDNFRD

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family [H]

Homologues:

Organism=Escherichia coli, GI87081737, Length=166, Percent_Identity=52.4096385542169, Blast_Score=158, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007551 [H]

Pfam domain/function: PF04461 DUF520 [H]

EC number: NA

Molecular weight: Translated: 18258; Mature: 18127

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFDVVSEVDKHELTNAVDQANRELDTRFDFKGVEARFELEDGKVINQSAPSDFQIKQM
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHH
TDILRARLLARGIDIRCLEFGDVETNLAGARQKVTVKQGIEQKQAKQLVAKLKEAKLKVE
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
AQINGDKLRVTGKKRDDLQDAIALLKKADFELPLQFDNFRD
EEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSFDVVSEVDKHELTNAVDQANRELDTRFDFKGVEARFELEDGKVINQSAPSDFQIKQM
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEECCCCCCCCHHHHH
TDILRARLLARGIDIRCLEFGDVETNLAGARQKVTVKQGIEQKQAKQLVAKLKEAKLKVE
HHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
AQINGDKLRVTGKKRDDLQDAIALLKKADFELPLQFDNFRD
EEECCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]