Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21244069
Identifier: 21244069
GI number: 21244069
Start: 3939364
End: 3940368
Strand: Reverse
Name: 21244069
Synonym: XAC3344
Alternate gene names: NA
Gene position: 3940368-3939364 (Counterclockwise)
Preceding gene: 21244070
Following gene: 21244064
Centisome position: 76.13
GC content: 63.58
Gene sequence:
>1005_bases ATGAGCATCGAACAGCTTGCCGAAACCGCCCAGGCGATGGTCGCCCCGGGTAAGGGCATCATCGCCATCGACGAATCGAC CAGCACGATCGCCAAGCGTTTTGCCAGCGTCGGCATCGAGAACATCGAAGAGAACCGTCGCGCCTATCGCGAACTGTTGC TGACCACGCCCAAGCTGAGCGACTACATCTCCGGCGCCATCCTGTTCGACGAGACCATCCGTCAGAAGACCAAGGATGGC GTGCCGTTCGCCGAGTACATGACCGCCCACGGCATCATCCCGGGCATCAAGGTCGACAAGGGCGCGCAGCCGCTGGCCGG CATGCCGGGCGAGCTGGTGACCGAAGGCCTGGACGGCCTGCGTGCGCGTCTGGAGGAGTACTACACGCTGGGTGCGCGCT TCGCCAAGTGGCGTGCGGTCATCAATATCGGCGAAGACATTCCGTCCGGCACCTGCATCGAGGCCAACTCGCATGCGCTG GCGCGTTACGCTGCGCTGTGCCAGGAACAAGGCTTGGTGCCGATGGTCGAGCCGGAAGTGATCATGGACGGCAGCCACGA CATCGAAACCTGCTACGAAGTGACCGAAGCCACGCTGCGCTCGCTGTTCGGTGCGCTGTATGAGCAGAACGTCGTGCTCG AGGGCACCATCCTGAAGGCCTCGATGGTGATCTCCGGCAAGAGCTGCGAAGAGCAGGCCAGTATCGAAGAGGTGGCCGAA TCCACCGTGATGTGCCTGAAGTCCACCGTGCCGGCGATCCTGCCGGGCATCGTGTTCCTGTCCGGCGGCCAGACCGACGA GCAGTCCACCGCCCACCTCAACGAAATGCACCAGCTCGGCAATCTGCCCTGGCCGCTGAGCTTCTCCTACGGCCGCGCCA TGCAGCAGGCCGCGCTGAAGCTGTGGGCCAAGGACATGACCGGCAACTTCGCCAAGGCGCAGCAGGTCATCTACGAGCGC GCGAAGGAAAACGGCCTGGCCGCGCTGGGTAAGTGGAAGGGTTGA
Upstream 100 bases:
>100_bases ACGCACGCACGTGTAATCGGTTGCAGGCATTCCGTGAAGGAATGTGTACGACTTTCGTCGCTATACTTTCGTTCTCCCCC GCAGCTGCCACAGGAACTAC
Downstream 100 bases:
>100_bases TCGATTGATGAGGGCTGCAAGGCCGCCGCATCGATAGAACAAAAACGCCGGCAGCATGCCGGCGTTTTTGTTTGCTGCAT CCACGGGTTCGATGCCGCGC
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MSIEQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDG VPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANSHAL ARYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAE STVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYER AKENGLAALGKWKG
Sequences:
>Translated_334_residues MSIEQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDG VPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANSHAL ARYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAE STVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYER AKENGLAALGKWKG >Mature_333_residues SIEQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLSDYISGAILFDETIRQKTKDGV PFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGLRARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANSHALA RYAALCQEQGLVPMVEPEVIMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAES TVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERA KENGLAALGKWKG
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family
Homologues:
Organism=Homo sapiens, GI34577112, Length=331, Percent_Identity=49.5468277945619, Blast_Score=325, Evalue=4e-89, Organism=Homo sapiens, GI34577110, Length=331, Percent_Identity=49.5468277945619, Blast_Score=325, Evalue=4e-89, Organism=Homo sapiens, GI4557305, Length=331, Percent_Identity=49.5468277945619, Blast_Score=325, Evalue=4e-89, Organism=Homo sapiens, GI193794814, Length=331, Percent_Identity=49.5468277945619, Blast_Score=325, Evalue=4e-89, Organism=Homo sapiens, GI4885063, Length=333, Percent_Identity=47.1471471471471, Blast_Score=317, Evalue=9e-87, Organism=Homo sapiens, GI40354205, Length=332, Percent_Identity=46.6867469879518, Blast_Score=298, Evalue=5e-81, Organism=Caenorhabditis elegans, GI25150450, Length=335, Percent_Identity=50.1492537313433, Blast_Score=322, Evalue=1e-88, Organism=Caenorhabditis elegans, GI71983985, Length=332, Percent_Identity=48.7951807228916, Blast_Score=311, Evalue=3e-85, Organism=Caenorhabditis elegans, GI71983990, Length=235, Percent_Identity=48.0851063829787, Blast_Score=226, Evalue=1e-59, Organism=Drosophila melanogaster, GI24650282, Length=331, Percent_Identity=50.1510574018127, Blast_Score=326, Evalue=1e-89, Organism=Drosophila melanogaster, GI24650280, Length=331, Percent_Identity=50.1510574018127, Blast_Score=326, Evalue=1e-89, Organism=Drosophila melanogaster, GI24650278, Length=331, Percent_Identity=50.1510574018127, Blast_Score=326, Evalue=1e-89, Organism=Drosophila melanogaster, GI221459619, Length=331, Percent_Identity=49.8489425981873, Blast_Score=325, Evalue=4e-89, Organism=Drosophila melanogaster, GI24650288, Length=331, Percent_Identity=49.8489425981873, Blast_Score=325, Evalue=4e-89, Organism=Drosophila melanogaster, GI45553577, Length=331, Percent_Identity=49.2447129909366, Blast_Score=319, Evalue=1e-87, Organism=Drosophila melanogaster, GI24650304, Length=331, Percent_Identity=41.6918429003021, Blast_Score=290, Evalue=8e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ALF1_XANAC (Q8PHB5)
Other databases:
- EMBL: AE008923 - RefSeq: NP_643651.1 - ProteinModelPortal: Q8PHB5 - SMR: Q8PHB5 - GeneID: 1157415 - GenomeReviews: AE008923_GR - KEGG: xac:XAC3344 - NMPDR: fig|190486.1.peg.3295 - HOGENOM: HBG559178 - OMA: RFAKWRG - ProtClustDB: CLSK863863 - BioCyc: XAXO190486:XAC3344-MONOMER - BRENDA: 4.1.2.13 - GO: GO:0006096 - InterPro: IPR000741 - InterPro: IPR013785 - Gene3D: G3DSA:3.20.20.70 - PANTHER: PTHR11627
Pfam domain/function: PF00274 Glycolytic
EC number: =4.1.2.13
Molecular weight: Translated: 36276; Mature: 36145
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00158 ALDOLASE_CLASS_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLS CCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHH DYISGAILFDETIRQKTKDGVPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGL HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHH RARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANSHALARYAALCQEQGLVPMVEPEV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCE IMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAE EECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHH STVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALK HHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SIEQLAETAQAMVAPGKGIIAIDESTSTIAKRFASVGIENIEENRRAYRELLLTTPKLS CHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHH DYISGAILFDETIRQKTKDGVPFAEYMTAHGIIPGIKVDKGAQPLAGMPGELVTEGLDGL HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHHHH RARLEEYYTLGARFAKWRAVINIGEDIPSGTCIEANSHALARYAALCQEQGLVPMVEPEV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCE IMDGSHDIETCYEVTEATLRSLFGALYEQNVVLEGTILKASMVISGKSCEEQASIEEVAE EECCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEEEEEECCCCCHHHHHHHHHHH STVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQLGNLPWPLSFSYGRAMQQAALK HHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217