Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is kynU
Identifier: 21242351
GI number: 21242351
Start: 1849041
End: 1850312
Strand: Reverse
Name: kynU
Synonym: XAC1601
Alternate gene names: 21242351
Gene position: 1850312-1849041 (Counterclockwise)
Preceding gene: 21242352
Following gene: 21242350
Centisome position: 35.75
GC content: 68.32
Gene sequence:
>1272_bases ATGACCGACCCGCTGTCCCGCGCCCATGCTGCTGCACTGGATGCCGCCGACCCGCTGCGCAACCTGCGCGATGCCTTCGT GTTCCCGCAGCACGGCGATGACGATCAGACCTATTTCGTCGGCAATTCGCTCGGCCTGCAGCCGCGCGCGGCCCGCGCGA TGGTGGACGAGGTGCTCGACCAGTGGGGTGCGCTGGCGGTGGAAGGCCACTTCACCGGCCCGACCCAATGGCTGACGTAC CACCAGTTGGTGGGCGACGCGCTGGCGCGCGTGGTCGGTGCGCAACCCGGCGAAGTGGTGGCCATGAACACCCTCAGCGT CAATCTGCATCTGATGATGGCGAGCTTCTATCGTCCCACTGCCGAGCGCGGCGCGATCCTGATCGAAGCTGGCGCATTTC CGTCCGACCGCCATGCGGTGGAATCGCAGCTGCGCCTGCACGGGCTGGACCCGGCCACGCATCTGATCGAAGTGGAAGCC GACGAACCCAACGGCACCGTGTCGATGTCGGCCATCGCCGAGGCCATTGCGCAGCATGGTCCGCACCTGGCGTTGGTGCT GTGGCCGGGCATCCAGTACCGCACCGGGCAGGCCTTCGACCTAGCCGAAATCGTGCGGCTGGCGCGCGCGCAGGGCGCGG CGGTGGGTTTAGATCTGGCGCATGCGGTGGGCAATCTCCCGCTGACCCTGCACGACGACGGCGTGGATTTCGCGGTGTGG TGCCACTACAAATATCTCAACGCCGGTCCCGGCGCGGTGGGCGGTTGCTTCGTGCACGCGCGGCATGCGACGAGCGACCT GCCGCGCATGGCCGGCTGGTGGGGACATGAGCAGCAGACCCGCTTCCGCATGGACCCGCAGTTCGTGCCCTCGCCCGGTG CCGAAGGCTGGCAGCTGAGCAATCCACCGGTGCTGGCGCTGGCACCGCTGCGCGCCTCGCTGGCGTTGTTCGACCAGGCC GGCATGGCTGCATTGCGCGCCAAGTCCGAACAGCTCACCGGGCATCTGGAGCAGATGATCCACGCGCGGGTGCCGCAGGT GCTGCAGATCGTCACGCCGGTAGAACCAGCGCGACGCGGTTGCCAGCTCTCGCTGCGGGTGGCCGGCGGACGCGCACGGG GCCGCGCGCTGTTCGAGCACCTCCACGCAGCCGGCGTGCTTGGCGACTGGCGCGAACCGGACGTGATCCGTATTGCGCCC GTGCCGCTGTACAACCGCTTCAGCGATCTGCATACCTTCGTGGAGCAGGTGGAAGCCTGGGCGGCTGCTTGA
Upstream 100 bases:
>100_bases CCCTGCCCGACCGGCCTCGGCCGGCGCGCCGGCCGTGCATGACGGCGTGCACGATGCCGGCAGGTAAACTGCCGCCCTGA TCCGTGTTGCGAGCCCGACG
Downstream 100 bases:
>100_bases GCGCGGCAGTCTGACTGCAGTGCCTCCAGCGCACCTGTATGGCACGCGGAATCGCCGCGCGCCCACGTACACTCCCAGCC CGCCCGGCGTTGCTGCCAGT
Product: kynureninase
Products: NA
Alternate protein names: L-kynurenine hydrolase
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MTDPLSRAHAAALDAADPLRNLRDAFVFPQHGDDDQTYFVGNSLGLQPRAARAMVDEVLDQWGALAVEGHFTGPTQWLTY HQLVGDALARVVGAQPGEVVAMNTLSVNLHLMMASFYRPTAERGAILIEAGAFPSDRHAVESQLRLHGLDPATHLIEVEA DEPNGTVSMSAIAEAIAQHGPHLALVLWPGIQYRTGQAFDLAEIVRLARAQGAAVGLDLAHAVGNLPLTLHDDGVDFAVW CHYKYLNAGPGAVGGCFVHARHATSDLPRMAGWWGHEQQTRFRMDPQFVPSPGAEGWQLSNPPVLALAPLRASLALFDQA GMAALRAKSEQLTGHLEQMIHARVPQVLQIVTPVEPARRGCQLSLRVAGGRARGRALFEHLHAAGVLGDWREPDVIRIAP VPLYNRFSDLHTFVEQVEAWAAA
Sequences:
>Translated_423_residues MTDPLSRAHAAALDAADPLRNLRDAFVFPQHGDDDQTYFVGNSLGLQPRAARAMVDEVLDQWGALAVEGHFTGPTQWLTY HQLVGDALARVVGAQPGEVVAMNTLSVNLHLMMASFYRPTAERGAILIEAGAFPSDRHAVESQLRLHGLDPATHLIEVEA DEPNGTVSMSAIAEAIAQHGPHLALVLWPGIQYRTGQAFDLAEIVRLARAQGAAVGLDLAHAVGNLPLTLHDDGVDFAVW CHYKYLNAGPGAVGGCFVHARHATSDLPRMAGWWGHEQQTRFRMDPQFVPSPGAEGWQLSNPPVLALAPLRASLALFDQA GMAALRAKSEQLTGHLEQMIHARVPQVLQIVTPVEPARRGCQLSLRVAGGRARGRALFEHLHAAGVLGDWREPDVIRIAP VPLYNRFSDLHTFVEQVEAWAAA >Mature_422_residues TDPLSRAHAAALDAADPLRNLRDAFVFPQHGDDDQTYFVGNSLGLQPRAARAMVDEVLDQWGALAVEGHFTGPTQWLTYH QLVGDALARVVGAQPGEVVAMNTLSVNLHLMMASFYRPTAERGAILIEAGAFPSDRHAVESQLRLHGLDPATHLIEVEAD EPNGTVSMSAIAEAIAQHGPHLALVLWPGIQYRTGQAFDLAEIVRLARAQGAAVGLDLAHAVGNLPLTLHDDGVDFAVWC HYKYLNAGPGAVGGCFVHARHATSDLPRMAGWWGHEQQTRFRMDPQFVPSPGAEGWQLSNPPVLALAPLRASLALFDQAG MAALRAKSEQLTGHLEQMIHARVPQVLQIVTPVEPARRGCQLSLRVAGGRARGRALFEHLHAAGVLGDWREPDVIRIAPV PLYNRFSDLHTFVEQVEAWAAA
Specific function: Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively
COG id: COG3844
COG function: function code E; Kynureninase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kynureninase family
Homologues:
Organism=Homo sapiens, GI4504937, Length=431, Percent_Identity=42.6914153132251, Blast_Score=360, Evalue=1e-99, Organism=Homo sapiens, GI74101437, Length=284, Percent_Identity=41.5492957746479, Blast_Score=234, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17550466, Length=435, Percent_Identity=39.0804597701149, Blast_Score=324, Evalue=5e-89, Organism=Saccharomyces cerevisiae, GI6323261, Length=441, Percent_Identity=41.4965986394558, Blast_Score=324, Evalue=2e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KYNU_XANAC (Q8PM33)
Other databases:
- EMBL: AE008923 - RefSeq: NP_641933.1 - ProteinModelPortal: Q8PM33 - SMR: Q8PM33 - GeneID: 1155672 - GenomeReviews: AE008923_GR - KEGG: xac:XAC1601 - NMPDR: fig|190486.1.peg.1577 - HOGENOM: HBG523016 - OMA: MTDDIAL - ProtClustDB: CLSK903751 - BioCyc: XAXO190486:XAC1601-MONOMER - GO: GO:0005737 - InterPro: IPR000192 - InterPro: IPR010111 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - PANTHER: PTHR14084 - TIGRFAMs: TIGR01814
Pfam domain/function: PF00266 Aminotran_5; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =3.7.1.3
Molecular weight: Translated: 45846; Mature: 45714
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: BINDING 105-105 BINDING 106-106 BINDING 218-218 BINDING 221-221 BINDING 243-243 BINDING 273-273 BINDING 301-301
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDPLSRAHAAALDAADPLRNLRDAFVFPQHGDDDQTYFVGNSLGLQPRAARAMVDEVLD CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH QWGALAVEGHFTGPTQWLTYHQLVGDALARVVGAQPGEVVAMNTLSVNLHLMMASFYRPT HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEHHHHCCC AERGAILIEAGAFPSDRHAVESQLRLHGLDPATHLIEVEADEPNGTVSMSAIAEAIAQHG CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHCC PHLALVLWPGIQYRTGQAFDLAEIVRLARAQGAAVGLDLAHAVGNLPLTLHDDGVDFAVW CEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEECHHHHHHHCCCCEEEECCCCCEEEE CHYKYLNAGPGAVGGCFVHARHATSDLPRMAGWWGHEQQTRFRMDPQFVPSPGAEGWQLS EEEEEECCCCCCCCHHEEEEHHCCCCCHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCC NPPVLALAPLRASLALFDQAGMAALRAKSEQLTGHLEQMIHARVPQVLQIVTPVEPARRG CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC CQLSLRVAGGRARGRALFEHLHAAGVLGDWREPDVIRIAPVPLYNRFSDLHTFVEQVEAW CEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH AAA HCC >Mature Secondary Structure TDPLSRAHAAALDAADPLRNLRDAFVFPQHGDDDQTYFVGNSLGLQPRAARAMVDEVLD CCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHH QWGALAVEGHFTGPTQWLTYHQLVGDALARVVGAQPGEVVAMNTLSVNLHLMMASFYRPT HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEHHHHCCC AERGAILIEAGAFPSDRHAVESQLRLHGLDPATHLIEVEADEPNGTVSMSAIAEAIAQHG CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHCC PHLALVLWPGIQYRTGQAFDLAEIVRLARAQGAAVGLDLAHAVGNLPLTLHDDGVDFAVW CEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCEECHHHHHHHCCCCEEEECCCCCEEEE CHYKYLNAGPGAVGGCFVHARHATSDLPRMAGWWGHEQQTRFRMDPQFVPSPGAEGWQLS EEEEEECCCCCCCCHHEEEEHHCCCCCHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCC NPPVLALAPLRASLALFDQAGMAALRAKSEQLTGHLEQMIHARVPQVLQIVTPVEPARRG CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC CQLSLRVAGGRARGRALFEHLHAAGVLGDWREPDVIRIAPVPLYNRFSDLHTFVEQVEAW CEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH AAA HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217