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The map label for this gene is yccS [C]

Identifier: 21242352

GI number: 21242352

Start: 1850346

End: 1852475

Strand: Reverse

Name: yccS [C]

Synonym: XAC1602

Alternate gene names: 21242352

Gene position: 1852475-1850346 (Counterclockwise)

Preceding gene: 21242353

Following gene: 21242351

Centisome position: 35.79

GC content: 69.44

Gene sequence:

>2130_bases
ATGCTGCGCGCACTGATCGACCTCAAACCACGCGATGTGCCCTTGCGCGTCGCGCTGCGCAACACCGCTGCAGTCGTCCT
GCCGCTGGCGATCGGGGTGGCGACCGGGCAGGTTGCCGCCGGTTTGGCAGTGTGCAGCGGCGCGCTCAATACCATGTTCT
CCGACCAGCCCGGGCCGTATCGTGCGCGTCTGCAACGCATGTTGATGGCAGCCCTGGCGGCCGGCCTGGCTGCCTTGCTC
GGCATCTGGGTCGGGCACAATACGCCGGCGCTGGTAGTGGCCGGCCTGTTGCTCGGCCTGGGCGGCGGCTTGCTGGTGGC
GCTCGGACCGGTGGCCGCGCGGGTGGGCCTGACCAGCATGATCCTGCTGGTCGTCAGCGCAGACATGCGGCTGCCGGTGC
AGCAGGCACCCGGTGTGGCGGCGCTGATCTTCGCTGGCGGCCTGCTGCAGGTGATGCTGGCGTTGGCGGCGTGGCCGCTG
CAGCGTTATCGCCCGGAACGCTTTGCATTGGCAGAGCTGATGCGCCAGCTGGCCGGCAGCGCGCGGCAGCGCCCGGACGC
CAGTGCGGCGCCGCCGGCGACGCAGGAAGTGCTCGACGCGATGGTGATGCTGCACGGCGAGCATCGCTCGCGCGCGATCG
CGGTGCAGAGCTTTCGCATCATCGCCGAGCTGTGCGATCGCGTGCGGCTGGAGCTGCTGTCGTTGGCCGATGCCGAGACG
CGCCTGACCGACTCGCAGGCGCGCCCGGCGATCGAACGCGTGCTCGAACGCAGCGCCATCGTGCTGGAACAGCTCGCGCA
CGCGATGACCATGGGCGAAGACCCGCAGGCAGCCAATGCCTCGATGACCGGGTTCGACGACCTGGTCGGGGCATTGGCAC
GGTTTCAGCACGACAATGCCGATACGCGCGAACGCCGCCTGGTGCGCGTCGCCGTCGCGCGCGCACAGGGCCTGGGCGGC
CAGCTACGCGCGCTGATCCGCAACGCGCACTGGGCCAGCAGCCGTGGCGAAATCCAGGCGCAACTGGCCGAAGCGCGGCT
GCCGTCGGCGCTGCGCCCGGCCGCGACCTGGGCCACGTTGCGCGCAAATCTTGACCTGTCGTCGGTCGCCTTCCGGCACG
CGTTGCGTTGCGGCGTGTGTCTGGCGCTGGCCATCGCCTTCCAGCGCTGGCAGCAAATCCCGCACGGCTTCTGGATTCCG
ATGACCACCGCCATCGTGCTCAAACCGGATTTCGGCGGCACCTTCAGCTTTGGCGCGTTGCGCGTGGCCGGCACCTTCGT
CGGCCTGTTGCTGGCCACCTTGCTCGCGCATCTGGCGATGGACGGCGCCAGCATCCGTATGGCCCTGCTGGCGCTGTTTT
GCCTTGGGTTTCGGTTGCTGACGCAGGTGAACTACGGTATCGGCGTGGCGTTTTTGACCGGCATGCTGGTGCTGCTGCTG
TCCTTCGAAGGCGTGGCACCGGGCGAAGCGGTCGGCGCGCGCCTGCAGGCGACCGTGGCCGGCAGCGCGCTGGCGCTGGT
CGCCTATGCATTGTGGCCCACCCGCGAACGCCGGCAGATTCGCGCCTCGCTGGCGCAATTGCTCAGCGCATATCGCGACC
ATCTGCGCCATTTGCTGCTCGGCCAGATGGAGGGCCTGAGCGATACGCGTGCCGCCGCGCGTGTTGCACGCACCAATGCC
CAGGCCTCGATCGAGCGTTTGCGTGGCGAACCGCGCAGCCGTCGCAATCTGCAGGAGCTCAAGCTGGCCGAATCGCTGCT
GGCCAATGGCAACCGGCTGATCCGCGCCAGCCTGTTGCTGGAAGCGGTGCTGCGAGATGGCCATCCGCTACCCACGCTGG
ACGCGTTGCCCAGCTTTGCGCAGCAGGCCGATGAGGCGCTGTCCGCGGTGATCGACGGCCTGCGCACTGGCGGCACCCCT
GCCGCGGCTACCTTGCGCAACGCCGAGCGCCAGCTTTCCGATGCGTTGGCCGCATTGCCCGACAGTTCCCCAGCCACCGC
CGCGCTGGCCGACACCATCGACCGCGTCACCGACAGCATCGGCACGCTCACCCACCTGCTGCGCCCTGCCCGACCGGCCT
CGGCCGGCGCGCCGGCCGTGCATGACGGCGTGCACGATGCCGGCAGGTAA

Upstream 100 bases:

>100_bases
TCCTGCGCCTGAGCGCTATGCCACGGTCGAGGGTTGACAACCTAACCGCACGCGATCGCGCGCAGCAGGTCTGGCGCTCG
CATGCTCCGAAACCGGCACC

Downstream 100 bases:

>100_bases
ACTGCCGCCCTGATCCGTGTTGCGAGCCCGACGATGACCGACCCGCTGTCCCGCGCCCATGCTGCTGCACTGGATGCCGC
CGACCCGCTGCGCAACCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MLRALIDLKPRDVPLRVALRNTAAVVLPLAIGVATGQVAAGLAVCSGALNTMFSDQPGPYRARLQRMLMAALAAGLAALL
GIWVGHNTPALVVAGLLLGLGGGLLVALGPVAARVGLTSMILLVVSADMRLPVQQAPGVAALIFAGGLLQVMLALAAWPL
QRYRPERFALAELMRQLAGSARQRPDASAAPPATQEVLDAMVMLHGEHRSRAIAVQSFRIIAELCDRVRLELLSLADAET
RLTDSQARPAIERVLERSAIVLEQLAHAMTMGEDPQAANASMTGFDDLVGALARFQHDNADTRERRLVRVAVARAQGLGG
QLRALIRNAHWASSRGEIQAQLAEARLPSALRPAATWATLRANLDLSSVAFRHALRCGVCLALAIAFQRWQQIPHGFWIP
MTTAIVLKPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGASIRMALLALFCLGFRLLTQVNYGIGVAFLTGMLVLLL
SFEGVAPGEAVGARLQATVAGSALALVAYALWPTRERRQIRASLAQLLSAYRDHLRHLLLGQMEGLSDTRAAARVARTNA
QASIERLRGEPRSRRNLQELKLAESLLANGNRLIRASLLLEAVLRDGHPLPTLDALPSFAQQADEALSAVIDGLRTGGTP
AAATLRNAERQLSDALAALPDSSPATAALADTIDRVTDSIGTLTHLLRPARPASAGAPAVHDGVHDAGR

Sequences:

>Translated_709_residues
MLRALIDLKPRDVPLRVALRNTAAVVLPLAIGVATGQVAAGLAVCSGALNTMFSDQPGPYRARLQRMLMAALAAGLAALL
GIWVGHNTPALVVAGLLLGLGGGLLVALGPVAARVGLTSMILLVVSADMRLPVQQAPGVAALIFAGGLLQVMLALAAWPL
QRYRPERFALAELMRQLAGSARQRPDASAAPPATQEVLDAMVMLHGEHRSRAIAVQSFRIIAELCDRVRLELLSLADAET
RLTDSQARPAIERVLERSAIVLEQLAHAMTMGEDPQAANASMTGFDDLVGALARFQHDNADTRERRLVRVAVARAQGLGG
QLRALIRNAHWASSRGEIQAQLAEARLPSALRPAATWATLRANLDLSSVAFRHALRCGVCLALAIAFQRWQQIPHGFWIP
MTTAIVLKPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGASIRMALLALFCLGFRLLTQVNYGIGVAFLTGMLVLLL
SFEGVAPGEAVGARLQATVAGSALALVAYALWPTRERRQIRASLAQLLSAYRDHLRHLLLGQMEGLSDTRAAARVARTNA
QASIERLRGEPRSRRNLQELKLAESLLANGNRLIRASLLLEAVLRDGHPLPTLDALPSFAQQADEALSAVIDGLRTGGTP
AAATLRNAERQLSDALAALPDSSPATAALADTIDRVTDSIGTLTHLLRPARPASAGAPAVHDGVHDAGR
>Mature_709_residues
MLRALIDLKPRDVPLRVALRNTAAVVLPLAIGVATGQVAAGLAVCSGALNTMFSDQPGPYRARLQRMLMAALAAGLAALL
GIWVGHNTPALVVAGLLLGLGGGLLVALGPVAARVGLTSMILLVVSADMRLPVQQAPGVAALIFAGGLLQVMLALAAWPL
QRYRPERFALAELMRQLAGSARQRPDASAAPPATQEVLDAMVMLHGEHRSRAIAVQSFRIIAELCDRVRLELLSLADAET
RLTDSQARPAIERVLERSAIVLEQLAHAMTMGEDPQAANASMTGFDDLVGALARFQHDNADTRERRLVRVAVARAQGLGG
QLRALIRNAHWASSRGEIQAQLAEARLPSALRPAATWATLRANLDLSSVAFRHALRCGVCLALAIAFQRWQQIPHGFWIP
MTTAIVLKPDFGGTFSFGALRVAGTFVGLLLATLLAHLAMDGASIRMALLALFCLGFRLLTQVNYGIGVAFLTGMLVLLL
SFEGVAPGEAVGARLQATVAGSALALVAYALWPTRERRQIRASLAQLLSAYRDHLRHLLLGQMEGLSDTRAAARVARTNA
QASIERLRGEPRSRRNLQELKLAESLLANGNRLIRASLLLEAVLRDGHPLPTLDALPSFAQQADEALSAVIDGLRTGGTP
AAATLRNAERQLSDALAALPDSSPATAALADTIDRVTDSIGTLTHLLRPARPASAGAPAVHDGVHDAGR

Specific function: Unknown

COG id: COG1289

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yccS/yhfK family [H]

Homologues:

Organism=Escherichia coli, GI87081808, Length=597, Percent_Identity=20.6030150753769, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006726 [H]

Pfam domain/function: PF04632 FUSC [H]

EC number: NA

Molecular weight: Translated: 75176; Mature: 75176

Theoretical pI: Translated: 11.09; Mature: 11.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRALIDLKPRDVPLRVALRNTAAVVLPLAIGVATGQVAAGLAVCSGALNTMFSDQPGPY
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
RARLQRMLMAALAAGLAALLGIWVGHNTPALVVAGLLLGLGGGLLVALGPVAARVGLTSM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ILLVVSADMRLPVQQAPGVAALIFAGGLLQVMLALAAWPLQRYRPERFALAELMRQLAGS
HHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ARQRPDASAAPPATQEVLDAMVMLHGEHRSRAIAVQSFRIIAELCDRVRLELLSLADAET
HHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLTDSQARPAIERVLERSAIVLEQLAHAMTMGEDPQAANASMTGFDDLVGALARFQHDNA
HHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
DTRERRLVRVAVARAQGLGGQLRALIRNAHWASSRGEIQAQLAEARLPSALRPAATWATL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHCHHHHHHHH
RANLDLSSVAFRHALRCGVCLALAIAFQRWQQIPHGFWIPMTTAIVLKPDFGGTFSFGAL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCHHHH
RVAGTFVGLLLATLLAHLAMDGASIRMALLALFCLGFRLLTQVNYGIGVAFLTGMLVLLL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SFEGVAPGEAVGARLQATVAGSALALVAYALWPTRERRQIRASLAQLLSAYRDHLRHLLL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GQMEGLSDTRAAARVARTNAQASIERLRGEPRSRRNLQELKLAESLLANGNRLIRASLLL
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHH
EAVLRDGHPLPTLDALPSFAQQADEALSAVIDGLRTGGTPAAATLRNAERQLSDALAALP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
DSSPATAALADTIDRVTDSIGTLTHLLRPARPASAGAPAVHDGVHDAGR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MLRALIDLKPRDVPLRVALRNTAAVVLPLAIGVATGQVAAGLAVCSGALNTMFSDQPGPY
CCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
RARLQRMLMAALAAGLAALLGIWVGHNTPALVVAGLLLGLGGGLLVALGPVAARVGLTSM
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ILLVVSADMRLPVQQAPGVAALIFAGGLLQVMLALAAWPLQRYRPERFALAELMRQLAGS
HHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ARQRPDASAAPPATQEVLDAMVMLHGEHRSRAIAVQSFRIIAELCDRVRLELLSLADAET
HHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLTDSQARPAIERVLERSAIVLEQLAHAMTMGEDPQAANASMTGFDDLVGALARFQHDNA
HHCCHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
DTRERRLVRVAVARAQGLGGQLRALIRNAHWASSRGEIQAQLAEARLPSALRPAATWATL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHCHHHHHHHH
RANLDLSSVAFRHALRCGVCLALAIAFQRWQQIPHGFWIPMTTAIVLKPDFGGTFSFGAL
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCCCHHHH
RVAGTFVGLLLATLLAHLAMDGASIRMALLALFCLGFRLLTQVNYGIGVAFLTGMLVLLL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SFEGVAPGEAVGARLQATVAGSALALVAYALWPTRERRQIRASLAQLLSAYRDHLRHLLL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
GQMEGLSDTRAAARVARTNAQASIERLRGEPRSRRNLQELKLAESLLANGNRLIRASLLL
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCHHHHHHHHH
EAVLRDGHPLPTLDALPSFAQQADEALSAVIDGLRTGGTPAAATLRNAERQLSDALAALP
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
DSSPATAALADTIDRVTDSIGTLTHLLRPARPASAGAPAVHDGVHDAGR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]