Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242296
Identifier: 21242296
GI number: 21242296
Start: 1786741
End: 1787559
Strand: Reverse
Name: 21242296
Synonym: XAC1545
Alternate gene names: NA
Gene position: 1787559-1786741 (Counterclockwise)
Preceding gene: 21242297
Following gene: 21242295
Centisome position: 34.54
GC content: 64.59
Gene sequence:
>819_bases ATGCGCCTGACCCTGAGCCTGGCCATCCTGCTCGCATTGCCCGGTGTCGCAGCGGCAGAGGAGCAGTGCAAATTCTCCGA ACCACGCAGCCTGGACCTGCAGCTGACCGGCGTGAAGTCGGTCCTGTTCGAGGTCGCTTCCAACGACCTGCATCTGGACG CCTCGCCCAGCGGCGGCGGAAAACTGAGCGGACGCGCCTGTGCTGCCAGGGCTGAGTTGCTCAAGAGCCTGACCGTGACC CAGAAACGCGTCGGCGACAAGCTGGTGGTGACCTTGAACGATGACCGCCGGTTCTCCTTCGGCAACAGCTACTCCTACCT GGATCTGCGCGGCAGCGTGCCCAACACGGTGCTGGTGCAATTCGACGTGGGATCCGGCGATGCGCAGATCAACGGCGCCG CCGCAGTGAGCGCCGATGTGGGTTCCGGCGACATGACGATTCGTCGCACCAAGGGCCGCGTGACTGCCAAGGTGGGCTCC GGCGATGTCGAGCTGGAAGACCTGGGCGCTCTGCGCGTGTTGGCAGTGGGCTCGGGCGACCTCAAGGCGCGTGAGGTGCA CGGCGCGGTCGAGGTGGCGAAAGTGCAGTCCGGCGAGGTCAAGCTGCACGGCGTCGCAGGCAACATCAAGATCGGCACGA TCGGCTCGGGCGATGTCGATATCCGCGATGTGCAAGGCAATGTCAACGTGGAGTTGGTCGCTTCCGGCGCGTTGAATGTA CGCAAGGTGCGTGGCGATCTGAGCGTGGCGCACAAAGGCAGCGGCGATATCGATGTGAGCGAGGTCTCCGGCAGCACGCG GGTACCGGCAGACAAATGA
Upstream 100 bases:
>100_bases GGCAGCCCTGACATCTGGATCGGCGCAGCCATCGGCGTTGCGTTGATCGCCGCCTCCATCTATCTGCGCCGTCGGCGCTC CGAAGCCTGAGGGACGTCCC
Downstream 100 bases:
>100_bases CGACTTCTTTCAGGATGCGGGGGAATTGCTGATGAAATTGCTTGTTTCGGCGTTAGTGATGAGCGTCTTGCTGGCGGGTT GCGGCAAGTCCGAACCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MRLTLSLAILLALPGVAAAEEQCKFSEPRSLDLQLTGVKSVLFEVASNDLHLDASPSGGGKLSGRACAARAELLKSLTVT QKRVGDKLVVTLNDDRRFSFGNSYSYLDLRGSVPNTVLVQFDVGSGDAQINGAAAVSADVGSGDMTIRRTKGRVTAKVGS GDVELEDLGALRVLAVGSGDLKAREVHGAVEVAKVQSGEVKLHGVAGNIKIGTIGSGDVDIRDVQGNVNVELVASGALNV RKVRGDLSVAHKGSGDIDVSEVSGSTRVPADK
Sequences:
>Translated_272_residues MRLTLSLAILLALPGVAAAEEQCKFSEPRSLDLQLTGVKSVLFEVASNDLHLDASPSGGGKLSGRACAARAELLKSLTVT QKRVGDKLVVTLNDDRRFSFGNSYSYLDLRGSVPNTVLVQFDVGSGDAQINGAAAVSADVGSGDMTIRRTKGRVTAKVGS GDVELEDLGALRVLAVGSGDLKAREVHGAVEVAKVQSGEVKLHGVAGNIKIGTIGSGDVDIRDVQGNVNVELVASGALNV RKVRGDLSVAHKGSGDIDVSEVSGSTRVPADK >Mature_272_residues MRLTLSLAILLALPGVAAAEEQCKFSEPRSLDLQLTGVKSVLFEVASNDLHLDASPSGGGKLSGRACAARAELLKSLTVT QKRVGDKLVVTLNDDRRFSFGNSYSYLDLRGSVPNTVLVQFDVGSGDAQINGAAAVSADVGSGDMTIRRTKGRVTAKVGS GDVELEDLGALRVLAVGSGDLKAREVHGAVEVAKVQSGEVKLHGVAGNIKIGTIGSGDVDIRDVQGNVNVELVASGALNV RKVRGDLSVAHKGSGDIDVSEVSGSTRVPADK
Specific function: Unknown
COG id: COG3595
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28098; Mature: 28098
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTLSLAILLALPGVAAAEEQCKFSEPRSLDLQLTGVKSVLFEVASNDLHLDASPSGGG CEEEHEEEEEHHCCCCCCCHHHCCCCCCCCEEEEEECHHHHHHHHHCCCEEEECCCCCCC KLSGRACAARAELLKSLTVTQKRVGDKLVVTLNDDRRFSFGNSYSYLDLRGSVPNTVLVQ CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCEEEEEEECCCCCEEEEE FDVGSGDAQINGAAAVSADVGSGDMTIRRTKGRVTAKVGSGDVELEDLGALRVLAVGSGD EECCCCCCEECCEEEEEEECCCCCEEEEEECCEEEEEECCCCEEHHHCCEEEEEEECCCC LKAREVHGAVEVAKVQSGEVKLHGVAGNIKIGTIGSGDVDIRDVQGNVNVELVASGALNV CEEEECCCEEEEEEECCCCEEEEEEECCEEEEECCCCCEEEEEECCCEEEEEEECCCCEE RKVRGDLSVAHKGSGDIDVSEVSGSTRVPADK EEECCCEEEEECCCCCEEEEECCCCCCCCCCC >Mature Secondary Structure MRLTLSLAILLALPGVAAAEEQCKFSEPRSLDLQLTGVKSVLFEVASNDLHLDASPSGGG CEEEHEEEEEHHCCCCCCCHHHCCCCCCCCEEEEEECHHHHHHHHHCCCEEEECCCCCCC KLSGRACAARAELLKSLTVTQKRVGDKLVVTLNDDRRFSFGNSYSYLDLRGSVPNTVLVQ CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCEEEEEEECCCCCEEEEE FDVGSGDAQINGAAAVSADVGSGDMTIRRTKGRVTAKVGSGDVELEDLGALRVLAVGSGD EECCCCCCEECCEEEEEEECCCCCEEEEEECCEEEEEECCCCEEHHHCCEEEEEEECCCC LKAREVHGAVEVAKVQSGEVKLHGVAGNIKIGTIGSGDVDIRDVQGNVNVELVASGALNV CEEEECCCEEEEEEECCCCEEEEEEECCEEEEECCCCCEEEEEECCCEEEEEEECCCCEE RKVRGDLSVAHKGSGDIDVSEVSGSTRVPADK EEECCCEEEEECCCCCEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA