Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21242296

Identifier: 21242296

GI number: 21242296

Start: 1786741

End: 1787559

Strand: Reverse

Name: 21242296

Synonym: XAC1545

Alternate gene names: NA

Gene position: 1787559-1786741 (Counterclockwise)

Preceding gene: 21242297

Following gene: 21242295

Centisome position: 34.54

GC content: 64.59

Gene sequence:

>819_bases
ATGCGCCTGACCCTGAGCCTGGCCATCCTGCTCGCATTGCCCGGTGTCGCAGCGGCAGAGGAGCAGTGCAAATTCTCCGA
ACCACGCAGCCTGGACCTGCAGCTGACCGGCGTGAAGTCGGTCCTGTTCGAGGTCGCTTCCAACGACCTGCATCTGGACG
CCTCGCCCAGCGGCGGCGGAAAACTGAGCGGACGCGCCTGTGCTGCCAGGGCTGAGTTGCTCAAGAGCCTGACCGTGACC
CAGAAACGCGTCGGCGACAAGCTGGTGGTGACCTTGAACGATGACCGCCGGTTCTCCTTCGGCAACAGCTACTCCTACCT
GGATCTGCGCGGCAGCGTGCCCAACACGGTGCTGGTGCAATTCGACGTGGGATCCGGCGATGCGCAGATCAACGGCGCCG
CCGCAGTGAGCGCCGATGTGGGTTCCGGCGACATGACGATTCGTCGCACCAAGGGCCGCGTGACTGCCAAGGTGGGCTCC
GGCGATGTCGAGCTGGAAGACCTGGGCGCTCTGCGCGTGTTGGCAGTGGGCTCGGGCGACCTCAAGGCGCGTGAGGTGCA
CGGCGCGGTCGAGGTGGCGAAAGTGCAGTCCGGCGAGGTCAAGCTGCACGGCGTCGCAGGCAACATCAAGATCGGCACGA
TCGGCTCGGGCGATGTCGATATCCGCGATGTGCAAGGCAATGTCAACGTGGAGTTGGTCGCTTCCGGCGCGTTGAATGTA
CGCAAGGTGCGTGGCGATCTGAGCGTGGCGCACAAAGGCAGCGGCGATATCGATGTGAGCGAGGTCTCCGGCAGCACGCG
GGTACCGGCAGACAAATGA

Upstream 100 bases:

>100_bases
GGCAGCCCTGACATCTGGATCGGCGCAGCCATCGGCGTTGCGTTGATCGCCGCCTCCATCTATCTGCGCCGTCGGCGCTC
CGAAGCCTGAGGGACGTCCC

Downstream 100 bases:

>100_bases
CGACTTCTTTCAGGATGCGGGGGAATTGCTGATGAAATTGCTTGTTTCGGCGTTAGTGATGAGCGTCTTGCTGGCGGGTT
GCGGCAAGTCCGAACCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRLTLSLAILLALPGVAAAEEQCKFSEPRSLDLQLTGVKSVLFEVASNDLHLDASPSGGGKLSGRACAARAELLKSLTVT
QKRVGDKLVVTLNDDRRFSFGNSYSYLDLRGSVPNTVLVQFDVGSGDAQINGAAAVSADVGSGDMTIRRTKGRVTAKVGS
GDVELEDLGALRVLAVGSGDLKAREVHGAVEVAKVQSGEVKLHGVAGNIKIGTIGSGDVDIRDVQGNVNVELVASGALNV
RKVRGDLSVAHKGSGDIDVSEVSGSTRVPADK

Sequences:

>Translated_272_residues
MRLTLSLAILLALPGVAAAEEQCKFSEPRSLDLQLTGVKSVLFEVASNDLHLDASPSGGGKLSGRACAARAELLKSLTVT
QKRVGDKLVVTLNDDRRFSFGNSYSYLDLRGSVPNTVLVQFDVGSGDAQINGAAAVSADVGSGDMTIRRTKGRVTAKVGS
GDVELEDLGALRVLAVGSGDLKAREVHGAVEVAKVQSGEVKLHGVAGNIKIGTIGSGDVDIRDVQGNVNVELVASGALNV
RKVRGDLSVAHKGSGDIDVSEVSGSTRVPADK
>Mature_272_residues
MRLTLSLAILLALPGVAAAEEQCKFSEPRSLDLQLTGVKSVLFEVASNDLHLDASPSGGGKLSGRACAARAELLKSLTVT
QKRVGDKLVVTLNDDRRFSFGNSYSYLDLRGSVPNTVLVQFDVGSGDAQINGAAAVSADVGSGDMTIRRTKGRVTAKVGS
GDVELEDLGALRVLAVGSGDLKAREVHGAVEVAKVQSGEVKLHGVAGNIKIGTIGSGDVDIRDVQGNVNVELVASGALNV
RKVRGDLSVAHKGSGDIDVSEVSGSTRVPADK

Specific function: Unknown

COG id: COG3595

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28098; Mature: 28098

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTLSLAILLALPGVAAAEEQCKFSEPRSLDLQLTGVKSVLFEVASNDLHLDASPSGGG
CEEEHEEEEEHHCCCCCCCHHHCCCCCCCCEEEEEECHHHHHHHHHCCCEEEECCCCCCC
KLSGRACAARAELLKSLTVTQKRVGDKLVVTLNDDRRFSFGNSYSYLDLRGSVPNTVLVQ
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCEEEEEEECCCCCEEEEE
FDVGSGDAQINGAAAVSADVGSGDMTIRRTKGRVTAKVGSGDVELEDLGALRVLAVGSGD
EECCCCCCEECCEEEEEEECCCCCEEEEEECCEEEEEECCCCEEHHHCCEEEEEEECCCC
LKAREVHGAVEVAKVQSGEVKLHGVAGNIKIGTIGSGDVDIRDVQGNVNVELVASGALNV
CEEEECCCEEEEEEECCCCEEEEEEECCEEEEECCCCCEEEEEECCCEEEEEEECCCCEE
RKVRGDLSVAHKGSGDIDVSEVSGSTRVPADK
EEECCCEEEEECCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRLTLSLAILLALPGVAAAEEQCKFSEPRSLDLQLTGVKSVLFEVASNDLHLDASPSGGG
CEEEHEEEEEHHCCCCCCCHHHCCCCCCCCEEEEEECHHHHHHHHHCCCEEEECCCCCCC
KLSGRACAARAELLKSLTVTQKRVGDKLVVTLNDDRRFSFGNSYSYLDLRGSVPNTVLVQ
CCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCCEEEEEEECCCCCEEEEE
FDVGSGDAQINGAAAVSADVGSGDMTIRRTKGRVTAKVGSGDVELEDLGALRVLAVGSGD
EECCCCCCEECCEEEEEEECCCCCEEEEEECCEEEEEECCCCEEHHHCCEEEEEEECCCC
LKAREVHGAVEVAKVQSGEVKLHGVAGNIKIGTIGSGDVDIRDVQGNVNVELVASGALNV
CEEEECCCEEEEEEECCCCEEEEEEECCEEEEECCCCCEEEEEECCCEEEEEEECCCCEE
RKVRGDLSVAHKGSGDIDVSEVSGSTRVPADK
EEECCCEEEEECCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA