Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242295
Identifier: 21242295
GI number: 21242295
Start: 1786179
End: 1786685
Strand: Reverse
Name: 21242295
Synonym: XAC1544
Alternate gene names: NA
Gene position: 1786685-1786179 (Counterclockwise)
Preceding gene: 21242296
Following gene: 21242294
Centisome position: 34.52
GC content: 65.68
Gene sequence:
>507_bases GTGATGAGCGTCTTGCTGGCGGGTTGCGGCAAGTCCGAACCGACCGTCAACGTCTCCGGCCAGGCCAATGGTGCCGGCGT GACCTTTACCGGCAAGAGCCTGACGCTCAAGCGCAATGGCTTGCCCGCCGCCACCATCAGTGCCGATGGCGCGCTCAGCG TCGACGGCAAGCCGGTGGACTTGAACGAGGCGCAACGTCAGGCGATGCGCAGTTACTACGCGCAGGTGCAAGGCGTGGCC AAGAAGGGCATCGACATCGGCACCCAGGGCGCGGCGTTCGGCGCACATGCGGCGGGCGAAGCGATCAAGGGCGTGCTCAG CGGCAATTCCGATCAGATCGGCGACAAGATCGAGGCCGAGGCGGACACCTTCAAGAACAAGGCCCTGCAGATCTGCGACC AGCTGGCCACGCTGCGCACCGCGCAGGATGCAGCCGCGCACCTGGTGCCGGCGTTTGCGCCGTATTCGACCCTGACGCAG CACGACATCGACGATTGCCGCAAGTAG
Upstream 100 bases:
>100_bases GTGAGCGAGGTCTCCGGCAGCACGCGGGTACCGGCAGACAAATGACGACTTCTTTCAGGATGCGGGGGAATTGCTGATGA AATTGCTTGTTTCGGCGTTA
Downstream 100 bases:
>100_bases AGCGGCCGACAAACCGACTTCGCCCACCGACAAGCGGGCGTCGTCGGTACGCGGCGCGGCATGTGCCGCTCGTACACTGC GGCGCCTGTGCGCCCCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MMSVLLAGCGKSEPTVNVSGQANGAGVTFTGKSLTLKRNGLPAATISADGALSVDGKPVDLNEAQRQAMRSYYAQVQGVA KKGIDIGTQGAAFGAHAAGEAIKGVLSGNSDQIGDKIEAEADTFKNKALQICDQLATLRTAQDAAAHLVPAFAPYSTLTQ HDIDDCRK
Sequences:
>Translated_168_residues MMSVLLAGCGKSEPTVNVSGQANGAGVTFTGKSLTLKRNGLPAATISADGALSVDGKPVDLNEAQRQAMRSYYAQVQGVA KKGIDIGTQGAAFGAHAAGEAIKGVLSGNSDQIGDKIEAEADTFKNKALQICDQLATLRTAQDAAAHLVPAFAPYSTLTQ HDIDDCRK >Mature_168_residues MMSVLLAGCGKSEPTVNVSGQANGAGVTFTGKSLTLKRNGLPAATISADGALSVDGKPVDLNEAQRQAMRSYYAQVQGVA KKGIDIGTQGAAFGAHAAGEAIKGVLSGNSDQIGDKIEAEADTFKNKALQICDQLATLRTAQDAAAHLVPAFAPYSTLTQ HDIDDCRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17305; Mature: 17305
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSVLLAGCGKSEPTVNVSGQANGAGVTFTGKSLTLKRNGLPAATISADGALSVDGKPVD CCCEEEECCCCCCCEEEECCCCCCCCEEEECCEEEEECCCCCEEEECCCCEEECCCCCCC LNEAQRQAMRSYYAQVQGVAKKGIDIGTQGAAFGAHAAGEAIKGVLSGNSDQIGDKIEAE CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH ADTFKNKALQICDQLATLRTAQDAAAHLVPAFAPYSTLTQHDIDDCRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHCC >Mature Secondary Structure MMSVLLAGCGKSEPTVNVSGQANGAGVTFTGKSLTLKRNGLPAATISADGALSVDGKPVD CCCEEEECCCCCCCEEEECCCCCCCCEEEECCEEEEECCCCCEEEECCCCEEECCCCCCC LNEAQRQAMRSYYAQVQGVAKKGIDIGTQGAAFGAHAAGEAIKGVLSGNSDQIGDKIEAE CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH ADTFKNKALQICDQLATLRTAQDAAAHLVPAFAPYSTLTQHDIDDCRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA