Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
---|---|
Accession | NC_003919 |
Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21242294
Identifier: 21242294
GI number: 21242294
Start: 1785390
End: 1785911
Strand: Reverse
Name: 21242294
Synonym: XAC1543
Alternate gene names: NA
Gene position: 1785911-1785390 (Counterclockwise)
Preceding gene: 21242295
Following gene: 21242292
Centisome position: 34.51
GC content: 62.64
Gene sequence:
>522_bases ATGCCCTGCGACATTTTGGCAGGCACTGGACTGCCGCTTTGCCGATCCGCAGACCGGAGCGGGATTACACTAATGCGCTC TCCTCACTCCATCGACCCCATGAACAAGTTCGTGATGCTCTGCATGGCGCTTCTGCTGTGCACGCTTGCTGCCTGTGGCG ACCAATCGTCTCGCCGCGCCGAACGCGGCAAGCCGCGCGTTGCGGTCACCACGCAGTCGGTGATGATCCGCCGCCCGCCA GCTGCCAATGCCGAAATCACCCCCGATGGCACGCTCAAGATCGACGACATCGCGCTGCCGCAGAAAGAGCCGACACGCGC CAAGCTGCAGCTGCTGTTCGGCCACCTGCAGATGTTGCGTCAGCAGGCGGTCAACGAGGCCGGCCCGGATCCGGAATACA AGTCGATCAAGCTGACCGCCACGCCCGAGATCCAGACGCTCAGTGGTCAATTGCTGGATGAAATTCCGTCGCTGCAGCCG TATCGCGAGAGCTTCGGCAATGTGCAGGCCGAGCGGCACTGA
Upstream 100 bases:
>100_bases CACCGCCTGCACAGCTGTTCGCAGGGCGCGCGCCGCTGCTGATTGGCCGGCCGGAAAGCGCCCCCAGCCGACGATGCGTG CACGGCGACCAAACAGACCG
Downstream 100 bases:
>100_bases CGCTTAGCCGGCTTGGCCAAGCGACGACAAATCAGCAAAATCGGTAGGAGCGCGCCGCGACAGGGCGTTATCGATAATGC CCCATCGCGCACACGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MPCDILAGTGLPLCRSADRSGITLMRSPHSIDPMNKFVMLCMALLLCTLAACGDQSSRRAERGKPRVAVTTQSVMIRRPP AANAEITPDGTLKIDDIALPQKEPTRAKLQLLFGHLQMLRQQAVNEAGPDPEYKSIKLTATPEIQTLSGQLLDEIPSLQP YRESFGNVQAERH
Sequences:
>Translated_173_residues MPCDILAGTGLPLCRSADRSGITLMRSPHSIDPMNKFVMLCMALLLCTLAACGDQSSRRAERGKPRVAVTTQSVMIRRPP AANAEITPDGTLKIDDIALPQKEPTRAKLQLLFGHLQMLRQQAVNEAGPDPEYKSIKLTATPEIQTLSGQLLDEIPSLQP YRESFGNVQAERH >Mature_172_residues PCDILAGTGLPLCRSADRSGITLMRSPHSIDPMNKFVMLCMALLLCTLAACGDQSSRRAERGKPRVAVTTQSVMIRRPPA ANAEITPDGTLKIDDIALPQKEPTRAKLQLLFGHLQMLRQQAVNEAGPDPEYKSIKLTATPEIQTLSGQLLDEIPSLQPY RESFGNVQAERH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18960; Mature: 18829
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCDILAGTGLPLCRSADRSGITLMRSPHSIDPMNKFVMLCMALLLCTLAACGDQSSRRA CCCCCCCCCCCCHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH ERGKPRVAVTTQSVMIRRPPAANAEITPDGTLKIDDIALPQKEPTRAKLQLLFGHLQMLR HCCCCCEEEEEHHEEEECCCCCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH QQAVNEAGPDPEYKSIKLTATPEIQTLSGQLLDEIPSLQPYRESFGNVQAERH HHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure PCDILAGTGLPLCRSADRSGITLMRSPHSIDPMNKFVMLCMALLLCTLAACGDQSSRRA CCCCCCCCCCCHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH ERGKPRVAVTTQSVMIRRPPAANAEITPDGTLKIDDIALPQKEPTRAKLQLLFGHLQMLR HCCCCCEEEEEHHEEEECCCCCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHH QQAVNEAGPDPEYKSIKLTATPEIQTLSGQLLDEIPSLQPYRESFGNVQAERH HHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA