Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242154
Identifier: 21242154
GI number: 21242154
Start: 1614152
End: 1614754
Strand: Reverse
Name: 21242154
Synonym: XAC1401
Alternate gene names: NA
Gene position: 1614754-1614152 (Counterclockwise)
Preceding gene: 21242156
Following gene: 21242153
Centisome position: 31.2
GC content: 67.83
Gene sequence:
>603_bases ATGCAGCAGTCCGACCCCAAACACTACGACGCCCACTATTTCCGCCGCTGGTATCGCGATGCCGGCCTTGCCGACCCCGC ACGCCTGCGACGCAAGGTCGCACTCGCCGTGACCCAGGCCGAGTACTACCTGGAACGGCCGATCCGCAGCGTGCTCGACG TCGGCTGCGGCGAAGCCGCGTGGCGCGCGCCGTTGCTGGCGTTGCGGCCGAAGCTGAGTTATCTGGGTTTCGACAGCAGC GCCTATGCGGTGCAGCGCTATGGCCGCAGCCGCCAGATCCACCCCGCCCGCTTCGGCGATTTCGCCTGGCTGCGCCCGTG CGCGCCGGTGGACTTGCTGATCTGCTCGGACGTACTGCATTACGTGCCCACCCGCGAATTCAATCAGGGCCTGCCCGGAT TGGCCGAGATGTGCGCAGGCGTTGCGTTCCTGGAAGCCTTCGCCGAAGAAGATGCGTTCGAGGGCGATCACGACGGCTTC CAGGCGCGACCGGCGCGCTGGTATCGCAAACGCTTCGCCAGCGTGGGCTTCGCTGCGCTGGGGTCGCACTGCTGGCTGTC GCCGCAGCTGGCTGACCAGGCATCGGCGCTGGAGCGCGGCTGA
Upstream 100 bases:
>100_bases GTCTTGATCCACAAATACAGGGTCATGCGCTGGCTCCGCTGGCTCGCGTAGGATGGCCCGCATTTTCACCTATCCGCGCA CGCGAAAGCAGCCGACGTCC
Downstream 100 bases:
>100_bases CCGGGAGGTGGTTGCCAACGAGCATCGCATCCGGTCACTGCGTCGCCTGGACAGAAGAACGGTTGGGTGGCTCCACCTCC ATTGCTGGGTCGAGGGACGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MQQSDPKHYDAHYFRRWYRDAGLADPARLRRKVALAVTQAEYYLERPIRSVLDVGCGEAAWRAPLLALRPKLSYLGFDSS AYAVQRYGRSRQIHPARFGDFAWLRPCAPVDLLICSDVLHYVPTREFNQGLPGLAEMCAGVAFLEAFAEEDAFEGDHDGF QARPARWYRKRFASVGFAALGSHCWLSPQLADQASALERG
Sequences:
>Translated_200_residues MQQSDPKHYDAHYFRRWYRDAGLADPARLRRKVALAVTQAEYYLERPIRSVLDVGCGEAAWRAPLLALRPKLSYLGFDSS AYAVQRYGRSRQIHPARFGDFAWLRPCAPVDLLICSDVLHYVPTREFNQGLPGLAEMCAGVAFLEAFAEEDAFEGDHDGF QARPARWYRKRFASVGFAALGSHCWLSPQLADQASALERG >Mature_200_residues MQQSDPKHYDAHYFRRWYRDAGLADPARLRRKVALAVTQAEYYLERPIRSVLDVGCGEAAWRAPLLALRPKLSYLGFDSS AYAVQRYGRSRQIHPARFGDFAWLRPCAPVDLLICSDVLHYVPTREFNQGLPGLAEMCAGVAFLEAFAEEDAFEGDHDGF QARPARWYRKRFASVGFAALGSHCWLSPQLADQASALERG
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22612; Mature: 22612
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQSDPKHYDAHYFRRWYRDAGLADPARLRRKVALAVTQAEYYLERPIRSVLDVGCGEAA CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH WRAPLLALRPKLSYLGFDSSAYAVQRYGRSRQIHPARFGDFAWLRPCAPVDLLICSDVLH HHCCHHHHCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHH YVPTREFNQGLPGLAEMCAGVAFLEAFAEEDAFEGDHDGFQARPARWYRKRFASVGFAAL HCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GSHCWLSPQLADQASALERG CCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MQQSDPKHYDAHYFRRWYRDAGLADPARLRRKVALAVTQAEYYLERPIRSVLDVGCGEAA CCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH WRAPLLALRPKLSYLGFDSSAYAVQRYGRSRQIHPARFGDFAWLRPCAPVDLLICSDVLH HHCCHHHHCCCHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHH YVPTREFNQGLPGLAEMCAGVAFLEAFAEEDAFEGDHDGFQARPARWYRKRFASVGFAAL HCCCHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH GSHCWLSPQLADQASALERG CCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA