Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242156
Identifier: 21242156
GI number: 21242156
Start: 1615482
End: 1615931
Strand: Reverse
Name: 21242156
Synonym: XAC1403
Alternate gene names: NA
Gene position: 1615931-1615482 (Counterclockwise)
Preceding gene: 21242157
Following gene: 21242154
Centisome position: 31.22
GC content: 57.78
Gene sequence:
>450_bases GTGCAAAGGAAGCCCGAAATCGAGGCAGTTCTGAGAGCCGAGATCGATCACCTGCTGGAGCAATCCACACAACGGTTTCG CAGCGGCGCCCTGGCCGAATCGCTCGCCCTGGGATTACAGGCCTGGGCGCTGATCCCCGAACCCAAAGCGAACTGGGACT ATTACCCGCAAAGCCTGTCTGCAAGTTTCGTCAAGGATTACGCCGACCTGCACGATCAGGAAAACGTGCATCGATGGCTC GAGGTGATGGCGCTGATGTACGACGACCCAGACCACACCGACCATCTTGTGCTGATGACCGAAGGCGAAGCGATGCTGCA GCTCGGAGATGAGGCACGCGCCTGTGCTGCCTTCGGCAAAATTTACGCGCTATACGGCAAGAAGGGATTTGCCGGACACC AGAAACGGTATCTGGAGATGCTGCGCAAGCAACACCCGACAGGTGCATAA
Upstream 100 bases:
>100_bases GCGAACTGGACACCGGCGCCTGAGAGCAGCCAACAAGGCGCCCGCGCAGCTGTAGGCCACATGCATTGAATCGCTCGGCA ACCTGATCAAGGCCATCACC
Downstream 100 bases:
>100_bases GCTCACATTCGCTCTAGCGCAGCCTCCAGGATTCATCGACCCTTGCCCGGCGCGCACATCTCGACGTCACTGGCCGTCCC AACGATAAGGCACCGCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MQRKPEIEAVLRAEIDHLLEQSTQRFRSGALAESLALGLQAWALIPEPKANWDYYPQSLSASFVKDYADLHDQENVHRWL EVMALMYDDPDHTDHLVLMTEGEAMLQLGDEARACAAFGKIYALYGKKGFAGHQKRYLEMLRKQHPTGA
Sequences:
>Translated_149_residues MQRKPEIEAVLRAEIDHLLEQSTQRFRSGALAESLALGLQAWALIPEPKANWDYYPQSLSASFVKDYADLHDQENVHRWL EVMALMYDDPDHTDHLVLMTEGEAMLQLGDEARACAAFGKIYALYGKKGFAGHQKRYLEMLRKQHPTGA >Mature_149_residues MQRKPEIEAVLRAEIDHLLEQSTQRFRSGALAESLALGLQAWALIPEPKANWDYYPQSLSASFVKDYADLHDQENVHRWL EVMALMYDDPDHTDHLVLMTEGEAMLQLGDEARACAAFGKIYALYGKKGFAGHQKRYLEMLRKQHPTGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16987; Mature: 16987
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRKPEIEAVLRAEIDHLLEQSTQRFRSGALAESLALGLQAWALIPEPKANWDYYPQSLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH ASFVKDYADLHDQENVHRWLEVMALMYDDPDHTDHLVLMTEGEAMLQLGDEARACAAFGK HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHH IYALYGKKGFAGHQKRYLEMLRKQHPTGA HHHHHCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQRKPEIEAVLRAEIDHLLEQSTQRFRSGALAESLALGLQAWALIPEPKANWDYYPQSLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH ASFVKDYADLHDQENVHRWLEVMALMYDDPDHTDHLVLMTEGEAMLQLGDEARACAAFGK HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHCCHHHHHHHHHH IYALYGKKGFAGHQKRYLEMLRKQHPTGA HHHHHCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA