Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21242132
Identifier: 21242132
GI number: 21242132
Start: 1587631
End: 1588476
Strand: Reverse
Name: 21242132
Synonym: XAC1379
Alternate gene names: NA
Gene position: 1588476-1587631 (Counterclockwise)
Preceding gene: 21242133
Following gene: 21242131
Centisome position: 30.69
GC content: 68.56
Gene sequence:
>846_bases ATGTCTGGAACGATGAGTACGCCCTTTCCCATCGACCAGGAACCGCCGCGCGACGTGCTTGCCGGCGAATACGTGCTTGG CCTGCTGAGCGCAGAAGAACGCCTGGCGGCCGAACAACGCATCGCCACCGACGGCCAGTTCGCCCAGGCAGTGCTGCAGT GGCAGGAACTGCTGGCGCCGCTGCTGGAAGAAATCGTGGCGCAGACGCCGCCGGACCAGGTGTGGGTACGCGTGCGTCAG GCGCTGGGCTTCGATACGCCCTTGCGCGCGGTGCCGTCTGCAGCGCCGGTCAGCACGACCGCGCCTGCAGCGCCGTTGTG GAACAGCGTGCGGTTCTGGCGCTGGGCCAGCGTCGGTGGCCTGGCCACGGCAGCGGTCTGCGTGCTCGCCCTGCTCAACC TGCGTACGCCGCCGGCGCCGGTGCAGCCGCCGCACACTGGCGAAGTGGTGCAGACCCCGGTCACCCCGCCTGCGACCAAT CCACCTGCCGCGACCGGGATCGCCATGACCTCGACCCTGGCCACCGAAGACGGTCGCCCGGGTTATGTGGCCTTGATGGA CGCCGACAAGCACACCATCACGGTGACGCCGCTGGACCGCACCGCCACCGCCGACAAGGTGCCGGAGTTGTGGCTGATCA CCCCCGATGGCAAGGCGCATTCGATGGGCACCTTCGACGATCAACGTGCACGCCGTGCGCAGATTCCCGATCAGTTGATG CCCATGTTGAGCAACGAGGCCATTCTGGCCGTCACGCTGGAGCCGCCAGGCGGCGCACCCGGTGGCGTTGCCACCGGCAC CGTGGTGGCCAAGGGCGGCATCAGCACGCTGGCGATGGCTCCCTGA
Upstream 100 bases:
>100_bases TCTTCGAAGGCATCACCTACGAGGAACTCGCCGCGCGCACCGATACGCCGATCGGCACGGTCAAGAGCTGGATCCGTCGG GGTCTGGCCAAACTCAAGGC
Downstream 100 bases:
>100_bases TCCAGCGCGCCTGACCTCGCCTGCGGCCACTTCGCAGGCGGGGCTCTCCAAGACAGCCTCATCCGCGCCGGTATTCTGTG ACGCGGGCAATGTGTGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSGTMSTPFPIDQEPPRDVLAGEYVLGLLSAEERLAAEQRIATDGQFAQAVLQWQELLAPLLEEIVAQTPPDQVWVRVRQ ALGFDTPLRAVPSAAPVSTTAPAAPLWNSVRFWRWASVGGLATAAVCVLALLNLRTPPAPVQPPHTGEVVQTPVTPPATN PPAATGIAMTSTLATEDGRPGYVALMDADKHTITVTPLDRTATADKVPELWLITPDGKAHSMGTFDDQRARRAQIPDQLM PMLSNEAILAVTLEPPGGAPGGVATGTVVAKGGISTLAMAP
Sequences:
>Translated_281_residues MSGTMSTPFPIDQEPPRDVLAGEYVLGLLSAEERLAAEQRIATDGQFAQAVLQWQELLAPLLEEIVAQTPPDQVWVRVRQ ALGFDTPLRAVPSAAPVSTTAPAAPLWNSVRFWRWASVGGLATAAVCVLALLNLRTPPAPVQPPHTGEVVQTPVTPPATN PPAATGIAMTSTLATEDGRPGYVALMDADKHTITVTPLDRTATADKVPELWLITPDGKAHSMGTFDDQRARRAQIPDQLM PMLSNEAILAVTLEPPGGAPGGVATGTVVAKGGISTLAMAP >Mature_280_residues SGTMSTPFPIDQEPPRDVLAGEYVLGLLSAEERLAAEQRIATDGQFAQAVLQWQELLAPLLEEIVAQTPPDQVWVRVRQA LGFDTPLRAVPSAAPVSTTAPAAPLWNSVRFWRWASVGGLATAAVCVLALLNLRTPPAPVQPPHTGEVVQTPVTPPATNP PAATGIAMTSTLATEDGRPGYVALMDADKHTITVTPLDRTATADKVPELWLITPDGKAHSMGTFDDQRARRAQIPDQLMP MLSNEAILAVTLEPPGGAPGGVATGTVVAKGGISTLAMAP
Specific function: Unknown
COG id: COG5343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29519; Mature: 29388
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGTMSTPFPIDQEPPRDVLAGEYVLGLLSAEERLAAEQRIATDGQFAQAVLQWQELLAP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LLEEIVAQTPPDQVWVRVRQALGFDTPLRAVPSAAPVSTTAPAAPLWNSVRFWRWASVGG HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHCHHHEEECCCCH LATAAVCVLALLNLRTPPAPVQPPHTGEVVQTPVTPPATNPPAATGIAMTSTLATEDGRP HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCC GYVALMDADKHTITVTPLDRTATADKVPELWLITPDGKAHSMGTFDDQRARRAQIPDQLM CEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHH PMLSNEAILAVTLEPPGGAPGGVATGTVVAKGGISTLAMAP HHHCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCC >Mature Secondary Structure SGTMSTPFPIDQEPPRDVLAGEYVLGLLSAEERLAAEQRIATDGQFAQAVLQWQELLAP CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LLEEIVAQTPPDQVWVRVRQALGFDTPLRAVPSAAPVSTTAPAAPLWNSVRFWRWASVGG HHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCHHHHCHHHEEECCCCH LATAAVCVLALLNLRTPPAPVQPPHTGEVVQTPVTPPATNPPAATGIAMTSTLATEDGRP HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCC GYVALMDADKHTITVTPLDRTATADKVPELWLITPDGKAHSMGTFDDQRARRAQIPDQLM CEEEEEECCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHCCCHHHH PMLSNEAILAVTLEPPGGAPGGVATGTVVAKGGISTLAMAP HHHCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA