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The map label for this gene is galA [H]

Identifier: 21242062

GI number: 21242062

Start: 1508458

End: 1509669

Strand: Reverse

Name: galA [H]

Synonym: XAC1309

Alternate gene names: 21242062

Gene position: 1509669-1508458 (Counterclockwise)

Preceding gene: 77748577

Following gene: 21242061

Centisome position: 29.17

GC content: 63.12

Gene sequence:

>1212_bases
ATGCGCTCACCACGCCGTCTCTGGACGCCCGCGCTCCTGGCGCTGGCCATTTCCACCTTCGCACACGCCGCCCCGGCTCC
CGCCGCGTTGTATCTCGGCGCGGACCTGTCCTACGTCAACGAGATGGAAGAATGCGGCGTGCAATACCGCCAGAACGGCG
TGGTCACCGATCCATTCGAACTCTTCCACGCCCACGGCGCCAATCTGGTGCGCGTACGCTTGTGGAACGATGCGCGCTGG
ACCAAGTACAGCGACCTGTCCGACGTGAAGAAAACCATTGCACGTGCACGCGCGCAAGGCATGCAGGTCTTGTTAGATCT
GCACTACTCCGACGATTGGGCCGACGGCGAAAAGCAATTGATCCCCAAGGCCTGGGCCAGCATCACCGACACCGACGAGT
TGGCGCGCACGCTGTATGGCTTCACCTACGACACGCTCAGCGCACTCGACCGCGCCGGTTTGATGCCAGAGCTGGTACAA
GTGGGCAACGAAAGTAATTCCGACCTGATGGACAGCACGCCCTGGGACAAGAAGCGCCCCATCGACTGGCAGCGCAACGC
CAAGCTGTTCAACGCCGGCATCAAGGCGGTGCGCGACATGGCCGCACGCTCGGCGATCAAACCAAGGGTGATGCTGCATA
TCGCCCAGCCGGAAAATGTGGAGCCGTGGTTCGCCGACGCCGCCAAGGCCGGCGTCACCGATTTCGATCTGATCGGCATC
AGCTACTACCGCAAATGGTCCACGCAATCGATGGCCGAGCTGGGCAGGACCATCAGGCGTCTGCGCGGCCGCTACGACGC
CGATGTGGTGGTGGTGGAAACCGCGTATCCGTGGACGCTGGACTCCGGCGACACCTCGCACAATCTGCTCGGCGAAGACT
CGCTGATTCCCGGCTACCCGGCCACGCCGCAAGGCCAGGCACGCTACATGGTGGACCTCACCCAGCTGGTGATCGATACC
GGCGGTGCCGGCGTGGTGTATTGGGAGCCGGCATGGACCAGCAGCCGTTGCAAAACGCGCTGGGGTACCGGCTCGTCGTG
GGAAAACGCCAGCTTCTTCGACTTCAAGCACGGCAACGAGGTGCTGCCGGCGATCGACTTCATGCGCCACCCGTATACCG
GTGTGCCTGCAGCGATCAAAGCTGACGCGCGCAAGCGTCATGCGGACAGCCAGCACGTCCCTGCAGAGGCCGAAAAAAGG
ACGCAGCCATGA

Upstream 100 bases:

>100_bases
TCTGCAAGCCACGTTTGGATTCTGCACAGCGGCCGCGCAGCAGCACGGCCGCCTGCGGCATGCTGTCACCCGCTCCACGT
TGTCCCTGTCGAGGAATTGC

Downstream 100 bases:

>100_bases
GCGGCATCAATCGGCGCGAGTTGCTGCGCGGCATGCTTGCCAGTGGGGTGAGCGCCGCACTGCCGGTGGGCGCAGCCGGC
ACAGTGGCGTCGGCTGGCGC

Product: arabinogalactan endo-1,4-beta-galactosidase

Products: NA

Alternate protein names: Endo-1,4-beta-galactanase; Galactanase [H]

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MRSPRRLWTPALLALAISTFAHAAPAPAALYLGADLSYVNEMEECGVQYRQNGVVTDPFELFHAHGANLVRVRLWNDARW
TKYSDLSDVKKTIARARAQGMQVLLDLHYSDDWADGEKQLIPKAWASITDTDELARTLYGFTYDTLSALDRAGLMPELVQ
VGNESNSDLMDSTPWDKKRPIDWQRNAKLFNAGIKAVRDMAARSAIKPRVMLHIAQPENVEPWFADAAKAGVTDFDLIGI
SYYRKWSTQSMAELGRTIRRLRGRYDADVVVVETAYPWTLDSGDTSHNLLGEDSLIPGYPATPQGQARYMVDLTQLVIDT
GGAGVVYWEPAWTSSRCKTRWGTGSSWENASFFDFKHGNEVLPAIDFMRHPYTGVPAAIKADARKRHADSQHVPAEAEKR
TQP

Sequences:

>Translated_403_residues
MRSPRRLWTPALLALAISTFAHAAPAPAALYLGADLSYVNEMEECGVQYRQNGVVTDPFELFHAHGANLVRVRLWNDARW
TKYSDLSDVKKTIARARAQGMQVLLDLHYSDDWADGEKQLIPKAWASITDTDELARTLYGFTYDTLSALDRAGLMPELVQ
VGNESNSDLMDSTPWDKKRPIDWQRNAKLFNAGIKAVRDMAARSAIKPRVMLHIAQPENVEPWFADAAKAGVTDFDLIGI
SYYRKWSTQSMAELGRTIRRLRGRYDADVVVVETAYPWTLDSGDTSHNLLGEDSLIPGYPATPQGQARYMVDLTQLVIDT
GGAGVVYWEPAWTSSRCKTRWGTGSSWENASFFDFKHGNEVLPAIDFMRHPYTGVPAAIKADARKRHADSQHVPAEAEKR
TQP
>Mature_403_residues
MRSPRRLWTPALLALAISTFAHAAPAPAALYLGADLSYVNEMEECGVQYRQNGVVTDPFELFHAHGANLVRVRLWNDARW
TKYSDLSDVKKTIARARAQGMQVLLDLHYSDDWADGEKQLIPKAWASITDTDELARTLYGFTYDTLSALDRAGLMPELVQ
VGNESNSDLMDSTPWDKKRPIDWQRNAKLFNAGIKAVRDMAARSAIKPRVMLHIAQPENVEPWFADAAKAGVTDFDLIGI
SYYRKWSTQSMAELGRTIRRLRGRYDADVVVVETAYPWTLDSGDTSHNLLGEDSLIPGYPATPQGQARYMVDLTQLVIDT
GGAGVVYWEPAWTSSRCKTRWGTGSSWENASFFDFKHGNEVLPAIDFMRHPYTGVPAAIKADARKRHADSQHVPAEAEKR
TQP

Specific function: Unknown

COG id: COG3867

COG function: function code G; Arabinogalactan endo-1,4-beta-galactosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 53 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011683
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07745 Glyco_hydro_53 [H]

EC number: =3.2.1.89 [H]

Molecular weight: Translated: 45146; Mature: 45146

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSPRRLWTPALLALAISTFAHAAPAPAALYLGADLSYVNEMEECGVQYRQNGVVTDPFE
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHH
LFHAHGANLVRVRLWNDARWTKYSDLSDVKKTIARARAQGMQVLLDLHYSDDWADGEKQL
HHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHH
IPKAWASITDTDELARTLYGFTYDTLSALDRAGLMPELVQVGNESNSDLMDSTPWDKKRP
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
IDWQRNAKLFNAGIKAVRDMAARSAIKPRVMLHIAQPENVEPWFADAAKAGVTDFDLIGI
CCHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCEEHHH
SYYRKWSTQSMAELGRTIRRLRGRYDADVVVVETAYPWTLDSGDTSHNLLGEDSLIPGYP
HHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCC
ATPQGQARYMVDLTQLVIDTGGAGVVYWEPAWTSSRCKTRWGTGSSWENASFFDFKHGNE
CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
VLPAIDFMRHPYTGVPAAIKADARKRHADSQHVPAEAEKRTQP
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCC
>Mature Secondary Structure
MRSPRRLWTPALLALAISTFAHAAPAPAALYLGADLSYVNEMEECGVQYRQNGVVTDPFE
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCHHH
LFHAHGANLVRVRLWNDARWTKYSDLSDVKKTIARARAQGMQVLLDLHYSDDWADGEKQL
HHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHH
IPKAWASITDTDELARTLYGFTYDTLSALDRAGLMPELVQVGNESNSDLMDSTPWDKKRP
HHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
IDWQRNAKLFNAGIKAVRDMAARSAIKPRVMLHIAQPENVEPWFADAAKAGVTDFDLIGI
CCHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCEEHHH
SYYRKWSTQSMAELGRTIRRLRGRYDADVVVVETAYPWTLDSGDTSHNLLGEDSLIPGYP
HHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCCCCC
ATPQGQARYMVDLTQLVIDTGGAGVVYWEPAWTSSRCKTRWGTGSSWENASFFDFKHGNE
CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
VLPAIDFMRHPYTGVPAAIKADARKRHADSQHVPAEAEKRTQP
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9398278 [H]