Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is btuB
Identifier: 77748577
GI number: 77748577
Start: 1509859
End: 1512552
Strand: Reverse
Name: btuB
Synonym: XAC1310
Alternate gene names: NA
Gene position: 1512552-1509859 (Counterclockwise)
Preceding gene: 21242064
Following gene: 21242062
Centisome position: 29.22
GC content: 64.66
Gene sequence:
>2694_bases ATGCCTGTTCACCATAGCGGCCACCCGGCCAGTCGGCGCCTGCGCCGCACGCCAGTTCCGGCCATCCTGTACACCACCAT CGCTTGCGTGCTGGCCACCGCGTTCGGCGCGCATGCACAGGACAGCGCTCCCGCCGCCCCGCCCGCAGGCGACGCCAGCC CGGCTGCTGGCAACGGGCAAACGCCGGTGACGCTGGACAACATCACCGTGATCGGCCAGCGCGCCAGCCTGAATCAGGCG GTGCAGGCCAAGCAGATGTCCGATCATGTCGTGGAAGTGATCTCCGCGGACAACATGGGTCAGATGCCCAATGTCACCGT GGCCGAGGCGCTGGTGCGGCTGCCTGGCGTCAACGGCACCCGCGACCGCGGCAACGAGAGCCTGGCCACCGTGCGCGGCC TGGGTCCGCGCATGACCATGGGCACCGTCAACGGGCGCGAAATCGCCTCCTCCGAGCCCAACCGCGCCGTGCGCTGGGAA GTGTTCCCCACCGAGATCGTCTCCACCGTCAAGGTCTACAAGACCCAGTCGGCTGATCTGGTCGCCGGCGGTCTTGCGGC CACCGTGGACATCTCCACCATCAGCCCGCTGGACTACACCGGGCCGGGATTCGTCGGCACCGCCGGCCCGGTGTTCTACG ACCACGCCAAGGATGTGGACGGCTACAGCCCGTGGGGCAGCCGCTTCGGCGCCAGCTGGGTGCACAAGCTCAACGACAAC CTGGCGGTCGCCTTCGGCGCCACGTACCAGAAGCAGAAGAACGCCAGCTCGTCGATCGGCAGCTGGGGCTATACCGATGC CACCACCTCCCGCGATGTGGATGGCGATGGCACCGTGGACCCGACCCCGTGGGGCGCGGCCGACCAGCTCAAGCTGATCG ACCAGACCCGCACTGGCGCGATGGGCACCGTGCAGTGGCGCTCGGGCAATGTCGAATTGAAGTTCGACGGCCTGTATTCG CGCATCGAAATCGACGAAGACCAATTGCAGAACTGGTTCAACGGGCTGGCCTTCAGCACCTTCTCCGGCAGCACCAATCC ATACACCACGCCGGGCTCGTCCTACACCATCGTCGATGGCGATGTGGTGGCCGGCACGCTGGCCAATTCGAACCTGCAGG TCGACCATGTGGTCAGCCACTACAACGAGGTCAAGACACTCACCGCCGGCGGTTTGAACGCCAAGTGGAGCGGCGATGTG TGGACCCTGGGCAGCGACCTGTCGTTTTCGCAGGCCAAGCGCGACAACACCTGGCAGGCGGTGCGTTTCGGCAGCAACCC GGACACCATCTCGTTCGATTTCCGTCGCAGCGTCACGCCCACCATCAGCACCAGCTCGGACACGCCCGAATACGGCATTG CCGGGCAGACCGAGCCGCAGGCACTGCGCGACAAGATCGCTGCGCTGGCACTCAATGCCAGCCGCGCCGTGGATGCCGGC CCGTTCACGTCGCTGGAACTCGGCGCACGCGCCGCGCGTCGCGAAAAACAGAACCGCCGCTTCCTCAGCAACCAGTCCGG CTACGATCAGCCGATCTCGGAGTATCAGGACCTGATCTACCCGGTCACCATGCCCGACTTGAACGTGCCCACGCTGACCG GCGGCAACATGGCCGAGATCGCACGCATCGGCTTTGGCGGGTTCGACCCGAGCACGCTCGACGAACAACTGCTCGACCAT TGGAACGTCAAGGAAGACGTGCGCGAAGCCTTCGCCAAAGCGGTCTTCAGCTCGCAGCTGTTCGGCACCGATGTCACCGG TAATGTCGGCGTGCGCCTGGTCAACACCAAGACCACCAGCGAGGGTTTCGATTCGGTCGGCAGCACCATCCAGCCCAGCA CCGGCAGCAAGGAATACACCGACGTGCTGCCCAGCGCCACGCTCAATTTCCTGATCGACGACCAGCGCATCCTGCGCTTT GCGGTGGCCAAGGTCATCGCGCGTCCGCCGCTGGACGAACTGCGCACCGGCCGCCGTCTGGACGACCCCAGCGTGACCGT TGGCCAGCTCACCGGCAGCGGCGGCAACCCGCAGCTGGACCCGTTCAAGGCCACCCAGGTCGATGTCTCTTACGAGTGGT ACTTCCATACCGAAGCGCTCGCCGCCCTGGCCGTGTATCGCAAGGAAGTGGATTCGAGCATCGGCTACCGCACCGACCGC GAAGTGATCAACGGCCTGGATTACCTGGTCAGCGCGCCGTTCAATGGCGGTGGCGGCTACATCAATGGCGTGGAGCTCAC CTTCCAGACGCCGTTCTACTTCATCCCGCACATGGAAAACTTCGGCGTCTACTCGAACTATTCGCTGGTGGATTCCAACC TCAAGGAATTCTCGCCGGAAGACAACCCGCTGCCGTTGAGCGGGCTGGCACGCAAGACCGGCACCTTCGACCTGTGGTAC AGCAGCGGCACCTTCGAAGCGCGCGTGGGCTACAAGTACCACAGCCCCTACACGGTGGTGTACGGCTGGAATGCCGCGCG GCTGGCGCGCCTGCAGAGCGAAGGCACGGTGGATCTGAGCCTGAACTGGCAGTACAGCAAGCAGCTCGGCTTCCGCTTCC AGGCGAGCAATCTCACCAACGAGCCGCTGCGCGCCTACACCGACAACAAGCCCAATCGCCTGGCCAATCAGGACGATGGC GGCTACCAGGTATTCGGTCGTCGTTACCAGTTGGAAGCAACCTACAAGTTCTAG
Upstream 100 bases:
>100_bases TGGCCACACCCGCGCGGACGCGCCAGCCCCGCTCCATGCGGCTGGCCGCACCAGCAGCTACCACCGTATTCGGTCACTTT GTCCTGGGAGGGATCAACCG
Downstream 100 bases:
>100_bases GCATTGCTCGATCGGCTGCACATGCTGCTGCGCAGCCGATCTGATCGCTGCACACCTGCATAACACCGCAGCCGCCGTGT GGAATCCAATCTGCAAGCCA
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Nb-Dependent Receptor; NB-Dependent Receptor Subfamily; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; NB-Dependent Outer Membrane Receptor Protein; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Receptor Subfamily Protein; NB Dependent Receptor-Related Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Maltose Outer Membrane Transporter MalA; NB Dependent Receptor For Iron Chelates; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; DEAD/DEAH Box Helicase-Like; Exported nB-Dependent Receptor; Nucleoside Diphosphate Kinase; NB Dependent Receptor Protein; 1-(5-Phosphoribosyl)-5-; Rhodanese-Like Protein; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 897; Mature: 896
Protein sequence:
>897_residues MPVHHSGHPASRRLRRTPVPAILYTTIACVLATAFGAHAQDSAPAAPPAGDASPAAGNGQTPVTLDNITVIGQRASLNQA VQAKQMSDHVVEVISADNMGQMPNVTVAEALVRLPGVNGTRDRGNESLATVRGLGPRMTMGTVNGREIASSEPNRAVRWE VFPTEIVSTVKVYKTQSADLVAGGLAATVDISTISPLDYTGPGFVGTAGPVFYDHAKDVDGYSPWGSRFGASWVHKLNDN LAVAFGATYQKQKNASSSIGSWGYTDATTSRDVDGDGTVDPTPWGAADQLKLIDQTRTGAMGTVQWRSGNVELKFDGLYS RIEIDEDQLQNWFNGLAFSTFSGSTNPYTTPGSSYTIVDGDVVAGTLANSNLQVDHVVSHYNEVKTLTAGGLNAKWSGDV WTLGSDLSFSQAKRDNTWQAVRFGSNPDTISFDFRRSVTPTISTSSDTPEYGIAGQTEPQALRDKIAALALNASRAVDAG PFTSLELGARAARREKQNRRFLSNQSGYDQPISEYQDLIYPVTMPDLNVPTLTGGNMAEIARIGFGGFDPSTLDEQLLDH WNVKEDVREAFAKAVFSSQLFGTDVTGNVGVRLVNTKTTSEGFDSVGSTIQPSTGSKEYTDVLPSATLNFLIDDQRILRF AVAKVIARPPLDELRTGRRLDDPSVTVGQLTGSGGNPQLDPFKATQVDVSYEWYFHTEALAALAVYRKEVDSSIGYRTDR EVINGLDYLVSAPFNGGGGYINGVELTFQTPFYFIPHMENFGVYSNYSLVDSNLKEFSPEDNPLPLSGLARKTGTFDLWY SSGTFEARVGYKYHSPYTVVYGWNAARLARLQSEGTVDLSLNWQYSKQLGFRFQASNLTNEPLRAYTDNKPNRLANQDDG GYQVFGRRYQLEATYKF
Sequences:
>Translated_897_residues MPVHHSGHPASRRLRRTPVPAILYTTIACVLATAFGAHAQDSAPAAPPAGDASPAAGNGQTPVTLDNITVIGQRASLNQA VQAKQMSDHVVEVISADNMGQMPNVTVAEALVRLPGVNGTRDRGNESLATVRGLGPRMTMGTVNGREIASSEPNRAVRWE VFPTEIVSTVKVYKTQSADLVAGGLAATVDISTISPLDYTGPGFVGTAGPVFYDHAKDVDGYSPWGSRFGASWVHKLNDN LAVAFGATYQKQKNASSSIGSWGYTDATTSRDVDGDGTVDPTPWGAADQLKLIDQTRTGAMGTVQWRSGNVELKFDGLYS RIEIDEDQLQNWFNGLAFSTFSGSTNPYTTPGSSYTIVDGDVVAGTLANSNLQVDHVVSHYNEVKTLTAGGLNAKWSGDV WTLGSDLSFSQAKRDNTWQAVRFGSNPDTISFDFRRSVTPTISTSSDTPEYGIAGQTEPQALRDKIAALALNASRAVDAG PFTSLELGARAARREKQNRRFLSNQSGYDQPISEYQDLIYPVTMPDLNVPTLTGGNMAEIARIGFGGFDPSTLDEQLLDH WNVKEDVREAFAKAVFSSQLFGTDVTGNVGVRLVNTKTTSEGFDSVGSTIQPSTGSKEYTDVLPSATLNFLIDDQRILRF AVAKVIARPPLDELRTGRRLDDPSVTVGQLTGSGGNPQLDPFKATQVDVSYEWYFHTEALAALAVYRKEVDSSIGYRTDR EVINGLDYLVSAPFNGGGGYINGVELTFQTPFYFIPHMENFGVYSNYSLVDSNLKEFSPEDNPLPLSGLARKTGTFDLWY SSGTFEARVGYKYHSPYTVVYGWNAARLARLQSEGTVDLSLNWQYSKQLGFRFQASNLTNEPLRAYTDNKPNRLANQDDG GYQVFGRRYQLEATYKF >Mature_896_residues PVHHSGHPASRRLRRTPVPAILYTTIACVLATAFGAHAQDSAPAAPPAGDASPAAGNGQTPVTLDNITVIGQRASLNQAV QAKQMSDHVVEVISADNMGQMPNVTVAEALVRLPGVNGTRDRGNESLATVRGLGPRMTMGTVNGREIASSEPNRAVRWEV FPTEIVSTVKVYKTQSADLVAGGLAATVDISTISPLDYTGPGFVGTAGPVFYDHAKDVDGYSPWGSRFGASWVHKLNDNL AVAFGATYQKQKNASSSIGSWGYTDATTSRDVDGDGTVDPTPWGAADQLKLIDQTRTGAMGTVQWRSGNVELKFDGLYSR IEIDEDQLQNWFNGLAFSTFSGSTNPYTTPGSSYTIVDGDVVAGTLANSNLQVDHVVSHYNEVKTLTAGGLNAKWSGDVW TLGSDLSFSQAKRDNTWQAVRFGSNPDTISFDFRRSVTPTISTSSDTPEYGIAGQTEPQALRDKIAALALNASRAVDAGP FTSLELGARAARREKQNRRFLSNQSGYDQPISEYQDLIYPVTMPDLNVPTLTGGNMAEIARIGFGGFDPSTLDEQLLDHW NVKEDVREAFAKAVFSSQLFGTDVTGNVGVRLVNTKTTSEGFDSVGSTIQPSTGSKEYTDVLPSATLNFLIDDQRILRFA VAKVIARPPLDELRTGRRLDDPSVTVGQLTGSGGNPQLDPFKATQVDVSYEWYFHTEALAALAVYRKEVDSSIGYRTDRE VINGLDYLVSAPFNGGGGYINGVELTFQTPFYFIPHMENFGVYSNYSLVDSNLKEFSPEDNPLPLSGLARKTGTFDLWYS SGTFEARVGYKYHSPYTVVYGWNAARLARLQSEGTVDLSLNWQYSKQLGFRFQASNLTNEPLRAYTDNKPNRLANQDDGG YQVFGRRYQLEATYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97475; Mature: 97344
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVHHSGHPASRRLRRTPVPAILYTTIACVLATAFGAHAQDSAPAAPPAGDASPAAGNGQ CCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC TPVTLDNITVIGQRASLNQAVQAKQMSDHVVEVISADNMGQMPNVTVAEALVRLPGVNGT CCEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC RDRGNESLATVRGLGPRMTMGTVNGREIASSEPNRAVRWEVFPTEIVSTVKVYKTQSADL CCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCE VAGGLAATVDISTISPLDYTGPGFVGTAGPVFYDHAKDVDGYSPWGSRFGASWVHKLNDN EECCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCC LAVAFGATYQKQKNASSSIGSWGYTDATTSRDVDGDGTVDPTPWGAADQLKLIDQTRTGA EEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC MGTVQWRSGNVELKFDGLYSRIEIDEDQLQNWFNGLAFSTFSGSTNPYTTPGSSYTIVDG EEEEEEECCCEEEEECCCEEEEECCHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECC DVVAGTLANSNLQVDHVVSHYNEVKTLTAGGLNAKWSGDVWTLGSDLSFSQAKRDNTWQA CEEEEEECCCCCCHHHHHHHHHHHHEEECCCCCCEECCCEEEECCCCCHHHHCCCCCEEE VRFGSNPDTISFDFRRSVTPTISTSSDTPEYGIAGQTEPQALRDKIAALALNASRAVDAG EEECCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCC PFTSLELGARAARREKQNRRFLSNQSGYDQPISEYQDLIYPVTMPDLNVPTLTGGNMAEI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCEECCCCHHHH ARIGFGGFDPSTLDEQLLDHWNVKEDVREAFAKAVFSSQLFGTDVTGNVGVRLVNTKTTS HHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC EGFDSVGSTIQPSTGSKEYTDVLPSATLNFLIDDQRILRFAVAKVIARPPLDELRTGRRL HHHHHHCCEECCCCCCCHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHCCCCC DDPSVTVGQLTGSGGNPQLDPFKATQVDVSYEWYFHTEALAALAVYRKEVDSSIGYRTDR CCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHH EVINGLDYLVSAPFNGGGGYINGVELTFQTPFYFIPHMENFGVYSNYSLVDSNLKEFSPE HHHCCHHHEEECCCCCCCCEEEEEEEEEECCEEEECCCCCCCCCCCCHHHHCCHHHCCCC DNPLPLSGLARKTGTFDLWYSSGTFEARVGYKYHSPYTVVYGWNAARLARLQSEGTVDLS CCCCCHHHHHHCCCCEEEEECCCCEEEEECEEECCCEEEEEECCHHHHHHHCCCCCEEEE LNWQYSKQLGFRFQASNLTNEPLRAYTDNKPNRLANQDDGGYQVFGRRYQLEATYKF EEEEEHHCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEECEEEEEEEEECC >Mature Secondary Structure PVHHSGHPASRRLRRTPVPAILYTTIACVLATAFGAHAQDSAPAAPPAGDASPAAGNGQ CCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC TPVTLDNITVIGQRASLNQAVQAKQMSDHVVEVISADNMGQMPNVTVAEALVRLPGVNGT CCEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCC RDRGNESLATVRGLGPRMTMGTVNGREIASSEPNRAVRWEVFPTEIVSTVKVYKTQSADL CCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCE VAGGLAATVDISTISPLDYTGPGFVGTAGPVFYDHAKDVDGYSPWGSRFGASWVHKLNDN EECCEEEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCC LAVAFGATYQKQKNASSSIGSWGYTDATTSRDVDGDGTVDPTPWGAADQLKLIDQTRTGA EEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCC MGTVQWRSGNVELKFDGLYSRIEIDEDQLQNWFNGLAFSTFSGSTNPYTTPGSSYTIVDG EEEEEEECCCEEEEECCCEEEEECCHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECC DVVAGTLANSNLQVDHVVSHYNEVKTLTAGGLNAKWSGDVWTLGSDLSFSQAKRDNTWQA CEEEEEECCCCCCHHHHHHHHHHHHEEECCCCCCEECCCEEEECCCCCHHHHCCCCCEEE VRFGSNPDTISFDFRRSVTPTISTSSDTPEYGIAGQTEPQALRDKIAALALNASRAVDAG EEECCCCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCC PFTSLELGARAARREKQNRRFLSNQSGYDQPISEYQDLIYPVTMPDLNVPTLTGGNMAEI CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEECCCCCCCEECCCCHHHH ARIGFGGFDPSTLDEQLLDHWNVKEDVREAFAKAVFSSQLFGTDVTGNVGVRLVNTKTTS HHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCC EGFDSVGSTIQPSTGSKEYTDVLPSATLNFLIDDQRILRFAVAKVIARPPLDELRTGRRL HHHHHHCCEECCCCCCCHHHHHCCCCEEEEEECHHHHHHHHHHHHHHCCCHHHHHCCCCC DDPSVTVGQLTGSGGNPQLDPFKATQVDVSYEWYFHTEALAALAVYRKEVDSSIGYRTDR CCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCHH EVINGLDYLVSAPFNGGGGYINGVELTFQTPFYFIPHMENFGVYSNYSLVDSNLKEFSPE HHHCCHHHEEECCCCCCCCEEEEEEEEEECCEEEECCCCCCCCCCCCHHHHCCHHHCCCC DNPLPLSGLARKTGTFDLWYSSGTFEARVGYKYHSPYTVVYGWNAARLARLQSEGTVDLS CCCCCHHHHHHCCCCEEEEECCCCEEEEECEEECCCEEEEEECCHHHHHHHCCCCCEEEE LNWQYSKQLGFRFQASNLTNEPLRAYTDNKPNRLANQDDGGYQVFGRRYQLEATYKF EEEEEHHCCCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEECEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA