Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is prc [H]
Identifier: 21241440
GI number: 21241440
Start: 793114
End: 795297
Strand: Direct
Name: prc [H]
Synonym: XAC0669
Alternate gene names: 21241440
Gene position: 793114-795297 (Clockwise)
Preceding gene: 21241439
Following gene: 21241442
Centisome position: 15.32
GC content: 64.1
Gene sequence:
>2184_bases ATGACCTACAACGTTTCTTCGTGCATGAAGGCCGGCCTGCTGGCGCTGGTGTTGACCACTCCGATGGCCTTGCTCGCACG CGCCGATACTGCGCTGCCGGCCGCTGCCACGCCCGATCAGGCGACGGCCACCAAACTCGTGTACGGCCTGCTCTCCGACA GCCGCTATGCCTACCGGCCGCGCACGCTGGACGAGGCGATGTCCAAGGACGTGTTCAAGCGCTATCTGGAAACGCTGGAT GGCGGCAAACAGTTCTTCACCCAGGCCGATATCGACAGCTTCGCGCCCCTCCAGGCCGGTGTTGGCGACGCGTTGCGCGG CGGCAACCTGGAGCCGGCGTTCAAGGTGTTCTCGGTCTACAAGAAGCGCGTCGATCAGCGCGTCAAGTACGCGCGCGACC TGCTCAAGCAGGACTTCGATTTCAGCGGTAACGACAAGTTCGAGTACGACCGCAAGGACGTGCCGTGGGCTGCGGACGAC AAGCAGTTGGACGTGCTGTGGCGCCAGTCGGTGATGAACGATTGGCTGCGCCTGAAACTGGCCGGCAAGAAGCCCGACGA CATCCGCAAGACGCTGGACAAGCGGTATGTGGCGCTGGCCGATTCGGTCAAGCAGCTCAAGGGCGAAGACGTGTTCCAGT TCTTCGTCAACGCCTACACCAACGCCGTCGACCCGCACACCGATTACTTCACCCCGCGCACGGCCGAGACGTTCAACCAG CAGATGTCGCTGTCGTTGGAAGGCATTGGCGCGCAGCTGCAGAAACAGGACGACATGGTGGTGATCCGCGAGGTGATCCC GGGCGGTCCGGCGGCGGTGGATGGCACGCTCAAGCCGGGCGATCGCATCGTCGGCGTTGGGCAGGCCAAGAGTGGCGCGA TCGAAGATGTGATCGGCTGGCGCATCGACGACGTGGTGGCCAAGATCCGCGGCAGCAAGGATACCCAGGTGCGCCTGGAG TACATCCCGGCCGAGTCGGGCATCGATGGCAAGCACCGCACGGTGACCCTGACCCGTCAGAAGGTGCGTCTGGCCGAGCA GGCTGCCAAGGGCGAAACCATCACCTTGCCGGCCACCGGCAGCGAGCCGCAGCGCCGCATCGGCATCATCAAGCTGCCGG GCTTCTACCAGGATTTCGAAGGCCGCCGTCGCAATGCAGCCGACTACGCCTCGGCCACGCGCGACGTCGCCAAGCTGCTG GCCGGCTTCAAGACCGACAAGGTCGATGGCGTGGTGCTGGACCTGCGCAATAACGGCGGTGGTTCGCTCGACGAGGCGAT CGAACTGACCGGCTTGTTCATCGAGCAGGGGCCGGTCGTGCAGGTCCGCGAATCCGGCGGCCGCGTCACCGTCAATGGCG ACAGCGACCCCAAGGTCGCCTGGGACGGCCCGCTGGCTGTCTTGATCAACCGCGGCTCGGCGTCGGCATCGGAGATCTTT GCCGGTGCGATCCAGGATTACGGCCGCGGTCTGGTGATCGGCGAAACCAGCTTCGGCAAGGGCACCGTGCAGAACATCGT CGACCTGGATCGCTGGCCTGCTGCCGAAGGGCAGCGGTATGGGCAGGTCAAGCTGACGATCGCGCAGTTCTTCCGCGTCA GCGGCTCCAGCACCCAGCACAAGGGTGTGGTGCCGGATATCGCCTTCCCGGCCAGCGTGGATGCCACCGAGTTCGGTGAG AGCACCTACGACAATGCATTGCCGTGGACGCGTATCGCCGCTGCCCCGCATACCCAGTACGGCAACTTCGCGGCATTGCT GCCCAAGTTGCAGGCTCTGCACACTGCGCGGATTGCCAGCGACAAGGAGTTCCAGTGGTGGGAAGAAGACGTCAAGCAGT TCCGCGACGAAAAGGCCAAGAAGTACATTTCGTTGAATGAGGCCGAGCGCGTTGCCGAGCGACAGAAGCAGGATCAGCAG CGCAAGGATCGCCAGCAGATTCGCAAGCAACTCGGCCTGCCGCTGGATCCGCTTGCCGAAGACAGCGACGACGGCCTGAC CGGTAACGAGCGCGACATCGTCAAGGACACTGCACGCGAAAAAGCGGCCGAAAAGCGCCCGGATCCGTTGCTGCATGAAT CGGCGGCCATCCTTGCGGATGCGCTGGGCTTGCTGTCGCAGGACAAGCCCTTGTCGGCGCAGGTGCTGCCGAAGTCGACC TCCCCGGGACGTTGGGCAGACTGA
Upstream 100 bases:
>100_bases TTCAGCCAGCGGATGACAACGCCAGCAACTTTCGGCACTGTCATGCTGTCTGATCCGTTCACCGCCTCTCTTTCATCGGC CCCGTGCCGAGAGCCATTCG
Downstream 100 bases:
>100_bases GCCACGCTGCCGATCGACTGCATGGACGCCACCGCTTGCCGGTGGCGTTTTCATGTTGGCAATACCGTGGCCGCTGGCAG CGTCTCAGGCGACCGCCTGC
Product: tail-specific protease
Products: NA
Alternate protein names: C-terminal-processing peptidase; PRC protein; Protease Re [H]
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MTYNVSSCMKAGLLALVLTTPMALLARADTALPAAATPDQATATKLVYGLLSDSRYAYRPRTLDEAMSKDVFKRYLETLD GGKQFFTQADIDSFAPLQAGVGDALRGGNLEPAFKVFSVYKKRVDQRVKYARDLLKQDFDFSGNDKFEYDRKDVPWAADD KQLDVLWRQSVMNDWLRLKLAGKKPDDIRKTLDKRYVALADSVKQLKGEDVFQFFVNAYTNAVDPHTDYFTPRTAETFNQ QMSLSLEGIGAQLQKQDDMVVIREVIPGGPAAVDGTLKPGDRIVGVGQAKSGAIEDVIGWRIDDVVAKIRGSKDTQVRLE YIPAESGIDGKHRTVTLTRQKVRLAEQAAKGETITLPATGSEPQRRIGIIKLPGFYQDFEGRRRNAADYASATRDVAKLL AGFKTDKVDGVVLDLRNNGGGSLDEAIELTGLFIEQGPVVQVRESGGRVTVNGDSDPKVAWDGPLAVLINRGSASASEIF AGAIQDYGRGLVIGETSFGKGTVQNIVDLDRWPAAEGQRYGQVKLTIAQFFRVSGSSTQHKGVVPDIAFPASVDATEFGE STYDNALPWTRIAAAPHTQYGNFAALLPKLQALHTARIASDKEFQWWEEDVKQFRDEKAKKYISLNEAERVAERQKQDQQ RKDRQQIRKQLGLPLDPLAEDSDDGLTGNERDIVKDTAREKAAEKRPDPLLHESAAILADALGLLSQDKPLSAQVLPKST SPGRWAD
Sequences:
>Translated_727_residues MTYNVSSCMKAGLLALVLTTPMALLARADTALPAAATPDQATATKLVYGLLSDSRYAYRPRTLDEAMSKDVFKRYLETLD GGKQFFTQADIDSFAPLQAGVGDALRGGNLEPAFKVFSVYKKRVDQRVKYARDLLKQDFDFSGNDKFEYDRKDVPWAADD KQLDVLWRQSVMNDWLRLKLAGKKPDDIRKTLDKRYVALADSVKQLKGEDVFQFFVNAYTNAVDPHTDYFTPRTAETFNQ QMSLSLEGIGAQLQKQDDMVVIREVIPGGPAAVDGTLKPGDRIVGVGQAKSGAIEDVIGWRIDDVVAKIRGSKDTQVRLE YIPAESGIDGKHRTVTLTRQKVRLAEQAAKGETITLPATGSEPQRRIGIIKLPGFYQDFEGRRRNAADYASATRDVAKLL AGFKTDKVDGVVLDLRNNGGGSLDEAIELTGLFIEQGPVVQVRESGGRVTVNGDSDPKVAWDGPLAVLINRGSASASEIF AGAIQDYGRGLVIGETSFGKGTVQNIVDLDRWPAAEGQRYGQVKLTIAQFFRVSGSSTQHKGVVPDIAFPASVDATEFGE STYDNALPWTRIAAAPHTQYGNFAALLPKLQALHTARIASDKEFQWWEEDVKQFRDEKAKKYISLNEAERVAERQKQDQQ RKDRQQIRKQLGLPLDPLAEDSDDGLTGNERDIVKDTAREKAAEKRPDPLLHESAAILADALGLLSQDKPLSAQVLPKST SPGRWAD >Mature_726_residues TYNVSSCMKAGLLALVLTTPMALLARADTALPAAATPDQATATKLVYGLLSDSRYAYRPRTLDEAMSKDVFKRYLETLDG GKQFFTQADIDSFAPLQAGVGDALRGGNLEPAFKVFSVYKKRVDQRVKYARDLLKQDFDFSGNDKFEYDRKDVPWAADDK QLDVLWRQSVMNDWLRLKLAGKKPDDIRKTLDKRYVALADSVKQLKGEDVFQFFVNAYTNAVDPHTDYFTPRTAETFNQQ MSLSLEGIGAQLQKQDDMVVIREVIPGGPAAVDGTLKPGDRIVGVGQAKSGAIEDVIGWRIDDVVAKIRGSKDTQVRLEY IPAESGIDGKHRTVTLTRQKVRLAEQAAKGETITLPATGSEPQRRIGIIKLPGFYQDFEGRRRNAADYASATRDVAKLLA GFKTDKVDGVVLDLRNNGGGSLDEAIELTGLFIEQGPVVQVRESGGRVTVNGDSDPKVAWDGPLAVLINRGSASASEIFA GAIQDYGRGLVIGETSFGKGTVQNIVDLDRWPAAEGQRYGQVKLTIAQFFRVSGSSTQHKGVVPDIAFPASVDATEFGES TYDNALPWTRIAAAPHTQYGNFAALLPKLQALHTARIASDKEFQWWEEDVKQFRDEKAKKYISLNEAERVAERQKQDQQR KDRQQIRKQLGLPLDPLAEDSDDGLTGNERDIVKDTAREKAAEKRPDPLLHESAAILADALGLLSQDKPLSAQVLPKSTS PGRWAD
Specific function: Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3 (PBP3). May be involved in protection of the bacterium from thermal and osmotic stresses [H]
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Escherichia coli, GI1788134, Length=716, Percent_Identity=41.340782122905, Blast_Score=489, Evalue=1e-139,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR005151 - InterPro: IPR004447 - InterPro: IPR020992 [H]
Pfam domain/function: PF11818 DUF3340; PF00595 PDZ; PF03572 Peptidase_S41 [H]
EC number: =3.4.21.102 [H]
Molecular weight: Translated: 80068; Mature: 79937
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYNVSSCMKAGLLALVLTTPMALLARADTALPAAATPDQATATKLVYGLLSDSRYAYRP CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECC RTLDEAMSKDVFKRYLETLDGGKQFFTQADIDSFAPLQAGVGDALRGGNLEPAFKVFSVY CHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHCCCHHHCCCCCCHHHHHHHHH KKRVDQRVKYARDLLKQDFDFSGNDKFEYDRKDVPWAADDKQLDVLWRQSVMNDWLRLKL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEE AGKKPDDIRKTLDKRYVALADSVKQLKGEDVFQFFVNAYTNAVDPHTDYFTPRTAETFNQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH QMSLSLEGIGAQLQKQDDMVVIREVIPGGPAAVDGTLKPGDRIVGVGQAKSGAIEDVIGW HHEEEHHCCCCHHHCCCCEEEEEHHCCCCCCEECCCCCCCCEEEEECCCCCCCHHHHHHH RIDDVVAKIRGSKDTQVRLEYIPAESGIDGKHRTVTLTRQKVRLAEQAAKGETITLPATG HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCCEEEECCCC SEPQRRIGIIKLPGFYQDFEGRRRNAADYASATRDVAKLLAGFKTDKVDGVVLDLRNNGG CCHHHCEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC GSLDEAIELTGLFIEQGPVVQVRESGGRVTVNGDSDPKVAWDGPLAVLINRGSASASEIF CCHHHHHHHHHEEECCCCEEEEECCCCEEEECCCCCCCEEECCCEEEEEECCCCCHHHHH AGAIQDYGRGLVIGETSFGKGTVQNIVDLDRWPAAEGQRYGQVKLTIAQFFRVSGSSTQH HHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHCCCCCCC KGVVPDIAFPASVDATEFGESTYDNALPWTRIAAAPHTQYGNFAALLPKLQALHTARIAS CCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHCC DKEFQWWEEDVKQFRDEKAKKYISLNEAERVAERQKQDQQRKDRQQIRKQLGLPLDPLAE CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DSDDGLTGNERDIVKDTAREKAAEKRPDPLLHESAAILADALGLLSQDKPLSAQVLPKST CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC SPGRWAD CCCCCCC >Mature Secondary Structure TYNVSSCMKAGLLALVLTTPMALLARADTALPAAATPDQATATKLVYGLLSDSRYAYRP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEECC RTLDEAMSKDVFKRYLETLDGGKQFFTQADIDSFAPLQAGVGDALRGGNLEPAFKVFSVY CHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHCCCHHHCCCCCCHHHHHHHHH KKRVDQRVKYARDLLKQDFDFSGNDKFEYDRKDVPWAADDKQLDVLWRQSVMNDWLRLKL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEE AGKKPDDIRKTLDKRYVALADSVKQLKGEDVFQFFVNAYTNAVDPHTDYFTPRTAETFNQ CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH QMSLSLEGIGAQLQKQDDMVVIREVIPGGPAAVDGTLKPGDRIVGVGQAKSGAIEDVIGW HHEEEHHCCCCHHHCCCCEEEEEHHCCCCCCEECCCCCCCCEEEEECCCCCCCHHHHHHH RIDDVVAKIRGSKDTQVRLEYIPAESGIDGKHRTVTLTRQKVRLAEQAAKGETITLPATG HHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCCEEEECCCC SEPQRRIGIIKLPGFYQDFEGRRRNAADYASATRDVAKLLAGFKTDKVDGVVLDLRNNGG CCHHHCEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC GSLDEAIELTGLFIEQGPVVQVRESGGRVTVNGDSDPKVAWDGPLAVLINRGSASASEIF CCHHHHHHHHHEEECCCCEEEEECCCCEEEECCCCCCCEEECCCEEEEEECCCCCHHHHH AGAIQDYGRGLVIGETSFGKGTVQNIVDLDRWPAAEGQRYGQVKLTIAQFFRVSGSSTQH HHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHCCCCCCC KGVVPDIAFPASVDATEFGESTYDNALPWTRIAAAPHTQYGNFAALLPKLQALHTARIAS CCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHCC DKEFQWWEEDVKQFRDEKAKKYISLNEAERVAERQKQDQQRKDRQQIRKQLGLPLDPLAE CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC DSDDGLTGNERDIVKDTAREKAAEKRPDPLLHESAAILADALGLLSQDKPLSAQVLPKST CCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCC SPGRWAD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1856173; 1729701; 9097040; 9278503; 1447154; 10049386; 7499412; 8576225 [H]