Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is matC
Identifier: 21241338
GI number: 21241338
Start: 668004
End: 669359
Strand: Direct
Name: matC
Synonym: XAC0567
Alternate gene names: NA
Gene position: 668004-669359 (Clockwise)
Preceding gene: 21241337
Following gene: 21241339
Centisome position: 12.91
GC content: 65.34
Gene sequence:
>1356_bases ATGACCCCGCAAATTGCAACGATTCTTGGCTTGGTGATCATGTTCATCGTCGCCACCGCATTGCCCATCAACATGGGGGC GGTGGCCTTCGCGCTGGCCTTCATCATTGGCGGCGTGTGGGTGGGGCTGGAGGGCAAGGAAGTGCTGGCCGGCTTTCCGG GCGACCTGTTCCTGACCCTGGTCGGCATTACCTATCTGTTCGCCATCGCACAGAAAAACGGCACCATCGACTTGCTGGTG CACTGGGCGGTGCGCGCGGTACGGGGGCGCATCGTCGCCATCCCCTGGGTGATGTTCGTCATCACCGGGCTGCTGACCGC CTTCGGTGCGCTGGGGCCGGCAGCGGTGGCCATCATCGGGCCGGTGGCGCTGCGCTTCGCCAAGCAGTACCGCATCAACC CGTTGATGATGGGCCTGCTGGTGATCCACGGTGCGCAAGGCGGCGGTTTCTCGCCGATCAGCGTGTATGGCGGCATCACC AACAAGGTGGTCGAAAAAGCCGGGCTGGACGTCAGCGAGATGGCGGTATTTCTCACCAGCCTGGGCTTCAACCTGATGAT GGCGATCATCTGCTTCTGCGCCTTCGGTGGGTTGAAGTTGATGCGCCGGCAGGAACTGTCGCTGGCCGATGCGCAGTACG TTGCGGTTGCCGGCGACCAGGCATCGCACCGCGGCTTCGCGATCGAAGGGCATGGTGCGCTGGTGGCGCCGGGCGGCGGC ACCTTGTCCACCGACCCGCTGGCATTGGAGGCGGTGTCGATCACCCGCGACCGCGTGATCACCTTGATCGGCCTGCTGGG TCTGGGCGTTGCTGCGCTGATCTACAACCTCAACGTCGGCCTGGTCTCGATCACGGTGGCGGTGGCATTGGCGCTGATCT CGCCCAACGCGCAGAAAGGCGCGGTGGACGGCATCAGTTGGTCCACCGTGCTGCTGATCAGCGGCGTGGTGACCTATATC GCCGTGCTGGAAAAATCCGGTGCGGTGGACTACATCGGCACCGGCGTGTCGCACATCGGCATGCCCCTGCTGGGCGCGCT GCTGGTCTGCTACGTCGGCGGTATCGTCTCTGCATTCGCCTCGTCGGCAGCGGTGCTGGGCGCCACCATTCCGTTGGCGG TGCCCTTCCTGATGCAGGGCCAGTTGGGCGCGGCCGGGGTGATCTGCGCGCTGGCCGTGTCCTCCACCATCGTCGATGTG AGCCCGTTTTCCACCAACGGCGCGCTGGTGGTGGCCTCGGCCGCCAAGGAAGAACGCGACGGCCTGTTCCGCCGCTTCCT GATCTACAGCGGCCTGGTGGTGTTGCTGGGGCCGCTGGCGGCGTGGCTGGTCTTCGTGGTGCCGGGCTGGCTGTGA
Upstream 100 bases:
>100_bases GCGCGCGGCATGACGATCAGGCAGGTGCTGCACACGGTGTGACCCCAGGATGGCGGGCGGCCATCCGTGTTGTACGCGTA TCAGGTGTCTGGGAGGGCGC
Downstream 100 bases:
>100_bases TGCGGTCCGCACGCCACAGCGCAGCGGGGCGCCCACGTAGAATGGGCGCCCCGACCCGATGCCGACAGCCTGCCCGCCAT GACCCTCGCTCCTGATTCGC
Product: dicarboxylate carrier protein
Products: NA
Alternate protein names: Dicarboxylate Carrier Protein; Dicarboxylate Carrier MatC Domain Protein; Dicarboxylate-Carrier Protein; Carrier Protein; Transmembrane Dicarboxylate Carrier Protein; LOW QUALITY PROTEIN Carrier Protein Membrane Protein; Integral Membrane Protein; Carrier Protein Membrane Protein; Gram-Positive Signal Peptide YSIRK Family; Na+/H+ Antiporter NhaD-Like Permease; Citrate Transporter; Membrane Associated Dicarboxylate Carrier Protein
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MTPQIATILGLVIMFIVATALPINMGAVAFALAFIIGGVWVGLEGKEVLAGFPGDLFLTLVGITYLFAIAQKNGTIDLLV HWAVRAVRGRIVAIPWVMFVITGLLTAFGALGPAAVAIIGPVALRFAKQYRINPLMMGLLVIHGAQGGGFSPISVYGGIT NKVVEKAGLDVSEMAVFLTSLGFNLMMAIICFCAFGGLKLMRRQELSLADAQYVAVAGDQASHRGFAIEGHGALVAPGGG TLSTDPLALEAVSITRDRVITLIGLLGLGVAALIYNLNVGLVSITVAVALALISPNAQKGAVDGISWSTVLLISGVVTYI AVLEKSGAVDYIGTGVSHIGMPLLGALLVCYVGGIVSAFASSAAVLGATIPLAVPFLMQGQLGAAGVICALAVSSTIVDV SPFSTNGALVVASAAKEERDGLFRRFLIYSGLVVLLGPLAAWLVFVVPGWL
Sequences:
>Translated_451_residues MTPQIATILGLVIMFIVATALPINMGAVAFALAFIIGGVWVGLEGKEVLAGFPGDLFLTLVGITYLFAIAQKNGTIDLLV HWAVRAVRGRIVAIPWVMFVITGLLTAFGALGPAAVAIIGPVALRFAKQYRINPLMMGLLVIHGAQGGGFSPISVYGGIT NKVVEKAGLDVSEMAVFLTSLGFNLMMAIICFCAFGGLKLMRRQELSLADAQYVAVAGDQASHRGFAIEGHGALVAPGGG TLSTDPLALEAVSITRDRVITLIGLLGLGVAALIYNLNVGLVSITVAVALALISPNAQKGAVDGISWSTVLLISGVVTYI AVLEKSGAVDYIGTGVSHIGMPLLGALLVCYVGGIVSAFASSAAVLGATIPLAVPFLMQGQLGAAGVICALAVSSTIVDV SPFSTNGALVVASAAKEERDGLFRRFLIYSGLVVLLGPLAAWLVFVVPGWL >Mature_450_residues TPQIATILGLVIMFIVATALPINMGAVAFALAFIIGGVWVGLEGKEVLAGFPGDLFLTLVGITYLFAIAQKNGTIDLLVH WAVRAVRGRIVAIPWVMFVITGLLTAFGALGPAAVAIIGPVALRFAKQYRINPLMMGLLVIHGAQGGGFSPISVYGGITN KVVEKAGLDVSEMAVFLTSLGFNLMMAIICFCAFGGLKLMRRQELSLADAQYVAVAGDQASHRGFAIEGHGALVAPGGGT LSTDPLALEAVSITRDRVITLIGLLGLGVAALIYNLNVGLVSITVAVALALISPNAQKGAVDGISWSTVLLISGVVTYIA VLEKSGAVDYIGTGVSHIGMPLLGALLVCYVGGIVSAFASSAAVLGATIPLAVPFLMQGQLGAAGVICALAVSSTIVDVS PFSTNGALVVASAAKEERDGLFRRFLIYSGLVVLLGPLAAWLVFVVPGWL
Specific function: Unknown
COG id: COG0471
COG function: function code P; Di- and tricarboxylate transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46368; Mature: 46237
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQIATILGLVIMFIVATALPINMGAVAFALAFIIGGVWVGLEGKEVLAGFPGDLFLTL CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCHHHCCCCHHHHHHH VGITYLFAIAQKNGTIDLLVHWAVRAVRGRIVAIPWVMFVITGLLTAFGALGPAAVAIIG HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHH PVALRFAKQYRINPLMMGLLVIHGAQGGGFSPISVYGGITNKVVEKAGLDVSEMAVFLTS HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHH LGFNLMMAIICFCAFGGLKLMRRQELSLADAQYVAVAGDQASHRGFAIEGHGALVAPGGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCEEEECCCC TLSTDPLALEAVSITRDRVITLIGLLGLGVAALIYNLNVGLVSITVAVALALISPNAQKG CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC AVDGISWSTVLLISGVVTYIAVLEKSGAVDYIGTGVSHIGMPLLGALLVCYVGGIVSAFA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SSAAVLGATIPLAVPFLMQGQLGAAGVICALAVSSTIVDVSPFSTNGALVVASAAKEERD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCHHHH GLFRRFLIYSGLVVLLGPLAAWLVFVVPGWL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TPQIATILGLVIMFIVATALPINMGAVAFALAFIIGGVWVGLEGKEVLAGFPGDLFLTL CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCHHHCCCCHHHHHHH VGITYLFAIAQKNGTIDLLVHWAVRAVRGRIVAIPWVMFVITGLLTAFGALGPAAVAIIG HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHH PVALRFAKQYRINPLMMGLLVIHGAQGGGFSPISVYGGITNKVVEKAGLDVSEMAVFLTS HHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHCCCHHHHHHHHHH LGFNLMMAIICFCAFGGLKLMRRQELSLADAQYVAVAGDQASHRGFAIEGHGALVAPGGG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEECCCEEEECCCC TLSTDPLALEAVSITRDRVITLIGLLGLGVAALIYNLNVGLVSITVAVALALISPNAQKG CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC AVDGISWSTVLLISGVVTYIAVLEKSGAVDYIGTGVSHIGMPLLGALLVCYVGGIVSAFA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SSAAVLGATIPLAVPFLMQGQLGAAGVICALAVSSTIVDVSPFSTNGALVVASAAKEERD HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCHHHH GLFRRFLIYSGLVVLLGPLAAWLVFVVPGWL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA