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The map label for this gene is ybhB [C]

Identifier: 21240974

GI number: 21240974

Start: 247005

End: 247616

Strand: Direct

Name: ybhB [C]

Synonym: XAC0200

Alternate gene names: 21240974

Gene position: 247005-247616 (Clockwise)

Preceding gene: 21240973

Following gene: 21240975

Centisome position: 4.77

GC content: 67.16

Gene sequence:

>612_bases
ATGCGTCTGACCAGCAACAGCATCGAAAACGGCAAGCCCATCGCGGTGGAGTTTGCCGCCGGCACGCCGGAGGGCTTTGC
GCCCAACCGCAATCCGCACCTGGCCTGGAGCGAGACGCCGGCCGGTACGCAGTCGTTTGCGCTGCTGTGCCTGGACCCGG
ACGTGCCGACCGTGCCCGACACCGTCGGCCGCGACGACTTGCAGATTCCCGTCGAGCAGCCACGCACCGATTTCGTGCAT
TGGGCCATGGCCGATATCCCCGCCGATGTGCATGAGATTGCGGCGGGCAGCTGCAGCGACGGCTTCGTGGTCAAGGGCAA
GCAGCAGCCAGCCGGCCCGGCCGGTGCCCGGCAGGGCCTGAATTCCTACACCCAGTGGTTCGCCGGCAATGCCGACATGG
CCGGCGACTACCGCGGCTACGACGGCCCGTACCCGCCGTTCAACGACCTGCGCGTGCACCGGTATTTCTTCCGCGTGTTC
GCGCTGGACGTGGCCAAACTTGGCTTGCCCAGCAGCTTCACCGCCGCCGACGTGCTGTCGGCGATGCAGGGTCATGTGCT
GGCCGAAGCGGCGTTGTACGGCACCTACACGCTGAACCCATCGCTGCGCTGA

Upstream 100 bases:

>100_bases
TAAACCCGGCCGAGCGCATCAGAAGGTTCCATGGCGGCGTCTTCCGCTGTGGCGCAGACCCAGGCACCCTGATCCGTATC
GCTTCCCTCGGAGACCCGCC

Downstream 100 bases:

>100_bases
GTGATCGCGCCGATGGCGGCGGTCGCTCCATCCTCCATGACGCCAGCCACGTTCGGCCGGCGCCGCAGCACAGGCAATCC
CCCTTGAAAGCATTCCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MRLTSNSIENGKPIAVEFAAGTPEGFAPNRNPHLAWSETPAGTQSFALLCLDPDVPTVPDTVGRDDLQIPVEQPRTDFVH
WAMADIPADVHEIAAGSCSDGFVVKGKQQPAGPAGARQGLNSYTQWFAGNADMAGDYRGYDGPYPPFNDLRVHRYFFRVF
ALDVAKLGLPSSFTAADVLSAMQGHVLAEAALYGTYTLNPSLR

Sequences:

>Translated_203_residues
MRLTSNSIENGKPIAVEFAAGTPEGFAPNRNPHLAWSETPAGTQSFALLCLDPDVPTVPDTVGRDDLQIPVEQPRTDFVH
WAMADIPADVHEIAAGSCSDGFVVKGKQQPAGPAGARQGLNSYTQWFAGNADMAGDYRGYDGPYPPFNDLRVHRYFFRVF
ALDVAKLGLPSSFTAADVLSAMQGHVLAEAALYGTYTLNPSLR
>Mature_203_residues
MRLTSNSIENGKPIAVEFAAGTPEGFAPNRNPHLAWSETPAGTQSFALLCLDPDVPTVPDTVGRDDLQIPVEQPRTDFVH
WAMADIPADVHEIAAGSCSDGFVVKGKQQPAGPAGARQGLNSYTQWFAGNADMAGDYRGYDGPYPPFNDLRVHRYFFRVF
ALDVAKLGLPSSFTAADVLSAMQGHVLAEAALYGTYTLNPSLR

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786990, Length=197, Percent_Identity=28.4263959390863, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1786757, Length=202, Percent_Identity=28.2178217821782, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 21855; Mature: 21855

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTSNSIENGKPIAVEFAAGTPEGFAPNRNPHLAWSETPAGTQSFALLCLDPDVPTVPD
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCC
TVGRDDLQIPVEQPRTDFVHWAMADIPADVHEIAAGSCSDGFVVKGKQQPAGPAGARQGL
CCCCCCEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHH
NSYTQWFAGNADMAGDYRGYDGPYPPFNDLRVHRYFFRVFALDVAKLGLPSSFTAADVLS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AMQGHVLAEAALYGTYTLNPSLR
HHHHHHHHHHHEEEEEEECCCCC
>Mature Secondary Structure
MRLTSNSIENGKPIAVEFAAGTPEGFAPNRNPHLAWSETPAGTQSFALLCLDPDVPTVPD
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCC
TVGRDDLQIPVEQPRTDFVHWAMADIPADVHEIAAGSCSDGFVVKGKQQPAGPAGARQGL
CCCCCCEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHH
NSYTQWFAGNADMAGDYRGYDGPYPPFNDLRVHRYFFRVFALDVAKLGLPSSFTAADVLS
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AMQGHVLAEAALYGTYTLNPSLR
HHHHHHHHHHHEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]