Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
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Accession | NC_003919 |
Length | 5,175,554 |
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The map label for this gene is 21240973
Identifier: 21240973
GI number: 21240973
Start: 244681
End: 246813
Strand: Direct
Name: 21240973
Synonym: XAC0199
Alternate gene names: NA
Gene position: 244681-246813 (Clockwise)
Preceding gene: 21240972
Following gene: 21240974
Centisome position: 4.73
GC content: 70.93
Gene sequence:
>2133_bases ATGCAAGCCGCCGCAGCGCGCATCGTTACAATAGCGGTTTGTCCGGGACCCGCCGCCGCCATGCAAGACGCCATTCTTCA AGCCCTGCGCCGCGATGCGGCCGACGATGCGGTGGCGCTGGCCCGCGAGTGGGTCACCAACGCGCCCGACCACGCCGCCG CCCACCGCTGGCTGGCGCTTGCGCTGCAGCAGCAAGGGCAGCCGGCGCTGGCGCTGGACAGCATCGACACCGCGCTGACG CTGACGCCCGAAGACGCCGACCTGCACCTGCTGCGCGCCGGCGCGTTGCTGGCCACGCGCGATCTGTCTGCCGCCGATGC CGCGCTGTCGCGCACCACTGCGCTGGATCCCAACCAGTTCAATGCCTACGTGATGCAGGCGCATCTGGCGGTGGCGCGCG GCGATCTGGACGAGGCCGAACGGCTCAGCCGCACCGCCGCGCGGCTGGCGCCGGAACATCCGCAATTGCTGGCGGTCGAT GGCGTGGTCGAGATGCGCCGCGGCCAGGACGACCGCGCGCTGTCGCTGCTGACCCGCGCTGCCGAGCAGTTGCCCGACGA TGCCCGCGTGCTGTTTTCGCTGGGCTTTGCGTATCTACAGAAAGAGCATTTCGCGTTCGCCGAGCGTGCCTTCGAGCGCG TGATCGAGCTCAATCCGCCCGGCACCGCGCTGCGCGCCTTCATTGCCCAGCTGGCCCAGCGCCAGGGCCGCCTGGACGAC GCGCTGGCGGCGATGCAGGGCGTGCTCGACCAGCCCGACGGCGATCTGCCGGCCATGCGCCGGCTTGCCGGCGAGATGGA ACTGCAGGCCGGTCGCCCCGATCAGGCCGCCGCGCACCTGCGCCTGGCACTGGCGCACTGGCCGGCCGACCGCCGCACGC TGCACGCGCTGCTCACCGCCTGGGAGCGGCTGGGCGCGGTGGACGACGCGCGCGACACCCTGGATGCGGCGCTGGCCACC TCGGCCACTGCGCACGACCTGTGGCTGGCGCGCCTGGCAGTAGAGCCGGTCGGTGGGCCGCAGGCGCAGGCAGTGATCGA GCGCTGGCTGCTGGCCATGCCCGAACACCTGCCGGCCCTGGAAGCGCTGATGCGCGTGCACGACATGCAGGGCCAGGCCG ACGAGGCGGAAATGGTGGCGCGCCAGATCGTGGCGGTGGAGCCGGGCCGCATCAGCGGCGAGCAGCGCATTGTCGAAGCC TTGCTGCAACGCGATCCACCGGCGGCGATCGCCTGCGTCGAATCGTTGATCGAATCGCTGCCTGCACCGCAGCAGACCGT GCTGCGGCCATGGTTGGGCAATGTGCAGGACCGCGCCGGCCAGCCCGATGCCGCCGTGGGTACCTGGATGCAGTTCCACC GCGAACAGGCCCAGCATCGGTTGCCGTTGCCGCCGCAGGCAGCCAGGCAGCCGACGCAGTGGCCTGCGCTGGGCAGCATT CCCGACACCGTCACCGCACGCCCGCTGTTCGTGTGGGGCACGCCCGGCTCGCATGTCGAACGCCTGGTCGCGGTGATGGG CGCGGCCACCCCGCTGGTCCGCGGCGACCGCTATGGCATCACGCCGCCATCGGATGCGCTGCAGAGCTACCGCACCCTCG AACAGCTGGCCTCCGGCGAACTGGCACCGACGGCGCTGGTGGAAGGCTGGAAGGCGCAACTGCCGCGCCGCGGCATCGAC GATGGCAATGTCATCGACTGGTTGCTGTGGTGGGACAACACCTTGTTGACCGCGCTGCGCCCGCACCTGCCCGAGGGCAG GCTGGCGATTGCGCTGCGTGACCCGCGCGACATGTTGCTGGACTGGCTCTCGGCCGGTGCGTCGGCGCCGCTGGCACTGC AATCGCCGCAACAGGCCACCGACTGGTTGCTGATCGCGCTGGAACAGCTGGCCACGCTGCACGAGCGCGACCTGTACCCC CACCGCATCATCCGGCTGGACGGGATCGAAGACGACCCGCAGGGAATTTCGACGGCCCTGGAACAGGCGTTCGGGCTGAG CTTCCCGCTGGTCGAACCGCGTGGCCCGGCGCGGTTGGCCTCCGGCCGCTGGCGCGATTACCGCGGCGTGCTCGGCGCCC AGTTCGATCTGCTCACCCTGATCGCGGTGCGCTTCGGTTACCCGCAGGACTGA
Upstream 100 bases:
>100_bases TTCAACCTCTGGCCGTGGCGAACGAGCGATATGAGTTCGCACCGCCGATAACGCCCACCTTGCACGCCGGCGCAGCGCCA GACGGCAGCGTCCGTTGCAC
Downstream 100 bases:
>100_bases GGCGCCATCAACGCGGTCGCGCCCCACGGCAGGTGGGCGTGGCCGCAGTCGCGTCGTCGCATTGTGTGCAGGCGCGGTAC GTACGCGGCGGTAAACCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 710; Mature: 710
Protein sequence:
>710_residues MQAAAARIVTIAVCPGPAAAMQDAILQALRRDAADDAVALAREWVTNAPDHAAAHRWLALALQQQGQPALALDSIDTALT LTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVD GVVEMRRGQDDRALSLLTRAAEQLPDDARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDD ALAAMQGVLDQPDGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWERLGAVDDARDTLDAALAT SATAHDLWLARLAVEPVGGPQAQAVIERWLLAMPEHLPALEALMRVHDMQGQADEAEMVARQIVAVEPGRISGEQRIVEA LLQRDPPAAIACVESLIESLPAPQQTVLRPWLGNVQDRAGQPDAAVGTWMQFHREQAQHRLPLPPQAARQPTQWPALGSI PDTVTARPLFVWGTPGSHVERLVAVMGAATPLVRGDRYGITPPSDALQSYRTLEQLASGELAPTALVEGWKAQLPRRGID DGNVIDWLLWWDNTLLTALRPHLPEGRLAIALRDPRDMLLDWLSAGASAPLALQSPQQATDWLLIALEQLATLHERDLYP HRIIRLDGIEDDPQGISTALEQAFGLSFPLVEPRGPARLASGRWRDYRGVLGAQFDLLTLIAVRFGYPQD
Sequences:
>Translated_710_residues MQAAAARIVTIAVCPGPAAAMQDAILQALRRDAADDAVALAREWVTNAPDHAAAHRWLALALQQQGQPALALDSIDTALT LTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVD GVVEMRRGQDDRALSLLTRAAEQLPDDARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDD ALAAMQGVLDQPDGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWERLGAVDDARDTLDAALAT SATAHDLWLARLAVEPVGGPQAQAVIERWLLAMPEHLPALEALMRVHDMQGQADEAEMVARQIVAVEPGRISGEQRIVEA LLQRDPPAAIACVESLIESLPAPQQTVLRPWLGNVQDRAGQPDAAVGTWMQFHREQAQHRLPLPPQAARQPTQWPALGSI PDTVTARPLFVWGTPGSHVERLVAVMGAATPLVRGDRYGITPPSDALQSYRTLEQLASGELAPTALVEGWKAQLPRRGID DGNVIDWLLWWDNTLLTALRPHLPEGRLAIALRDPRDMLLDWLSAGASAPLALQSPQQATDWLLIALEQLATLHERDLYP HRIIRLDGIEDDPQGISTALEQAFGLSFPLVEPRGPARLASGRWRDYRGVLGAQFDLLTLIAVRFGYPQD >Mature_710_residues MQAAAARIVTIAVCPGPAAAMQDAILQALRRDAADDAVALAREWVTNAPDHAAAHRWLALALQQQGQPALALDSIDTALT LTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQFNAYVMQAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVD GVVEMRRGQDDRALSLLTRAAEQLPDDARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDD ALAAMQGVLDQPDGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTAWERLGAVDDARDTLDAALAT SATAHDLWLARLAVEPVGGPQAQAVIERWLLAMPEHLPALEALMRVHDMQGQADEAEMVARQIVAVEPGRISGEQRIVEA LLQRDPPAAIACVESLIESLPAPQQTVLRPWLGNVQDRAGQPDAAVGTWMQFHREQAQHRLPLPPQAARQPTQWPALGSI PDTVTARPLFVWGTPGSHVERLVAVMGAATPLVRGDRYGITPPSDALQSYRTLEQLASGELAPTALVEGWKAQLPRRGID DGNVIDWLLWWDNTLLTALRPHLPEGRLAIALRDPRDMLLDWLSAGASAPLALQSPQQATDWLLIALEQLATLHERDLYP HRIIRLDGIEDDPQGISTALEQAFGLSFPLVEPRGPARLASGRWRDYRGVLGAQFDLLTLIAVRFGYPQD
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 77389; Mature: 77389
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAAAARIVTIAVCPGPAAAMQDAILQALRRDAADDAVALAREWVTNAPDHAAAHRWLAL CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH ALQQQGQPALALDSIDTALTLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQF HHHHCCCCCEEECCCCCEEEECCCCCCHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCCHH NAYVMQAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVDGVVEMRRGQDDRALSLLTRA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCHHHHHHHHHH AEQLPDDARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH ALAAMQGVLDQPDGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTA HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH WERLGAVDDARDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWLLAMPEHLPAL HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHH EALMRVHDMQGQADEAEMVARQIVAVEPGRISGEQRIVEALLQRDPPAAIACVESLIESL HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC PAPQQTVLRPWLGNVQDRAGQPDAAVGTWMQFHREQAQHRLPLPPQAARQPTQWPALGSI CCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCC PDTVTARPLFVWGTPGSHVERLVAVMGAATPLVRGDRYGITPPSDALQSYRTLEQLASGE CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC LAPTALVEGWKAQLPRRGIDDGNVIDWLLWWDNTLLTALRPHLPEGRLAIALRDPRDMLL CCHHHHHCCHHHHCCCCCCCCCCEEEEEEHHCHHHHHHHCCCCCCCCEEEEEECCHHHHH DWLSAGASAPLALQSPQQATDWLLIALEQLATLHERDLYPHRIIRLDGIEDDPQGISTAL HHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH EQAFGLSFPLVEPRGPARLASGRWRDYRGVLGAQFDLLTLIAVRFGYPQD HHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MQAAAARIVTIAVCPGPAAAMQDAILQALRRDAADDAVALAREWVTNAPDHAAAHRWLAL CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHH ALQQQGQPALALDSIDTALTLTPEDADLHLLRAGALLATRDLSAADAALSRTTALDPNQF HHHHCCCCCEEECCCCCEEEECCCCCCHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCCHH NAYVMQAHLAVARGDLDEAERLSRTAARLAPEHPQLLAVDGVVEMRRGQDDRALSLLTRA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHCCCCHHHHHHHHHH AEQLPDDARVLFSLGFAYLQKEHFAFAERAFERVIELNPPGTALRAFIAQLAQRQGRLDD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHH ALAAMQGVLDQPDGDLPAMRRLAGEMELQAGRPDQAAAHLRLALAHWPADRRTLHALLTA HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH WERLGAVDDARDTLDAALATSATAHDLWLARLAVEPVGGPQAQAVIERWLLAMPEHLPAL HHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHH EALMRVHDMQGQADEAEMVARQIVAVEPGRISGEQRIVEALLQRDPPAAIACVESLIESL HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHC PAPQQTVLRPWLGNVQDRAGQPDAAVGTWMQFHREQAQHRLPLPPQAARQPTQWPALGSI CCCHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCC PDTVTARPLFVWGTPGSHVERLVAVMGAATPLVRGDRYGITPPSDALQSYRTLEQLASGE CCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC LAPTALVEGWKAQLPRRGIDDGNVIDWLLWWDNTLLTALRPHLPEGRLAIALRDPRDMLL CCHHHHHCCHHHHCCCCCCCCCCEEEEEEHHCHHHHHHHCCCCCCCCEEEEEECCHHHHH DWLSAGASAPLALQSPQQATDWLLIALEQLATLHERDLYPHRIIRLDGIEDDPQGISTAL HHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH EQAFGLSFPLVEPRGPARLASGRWRDYRGVLGAQFDLLTLIAVRFGYPQD HHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA