Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226845

Identifier: 21226845

GI number: 21226845

Start: 889945

End: 890310

Strand: Reverse

Name: 21226845

Synonym: MM_0743

Alternate gene names: NA

Gene position: 890310-889945 (Counterclockwise)

Preceding gene: 21226846

Following gene: 21226842

Centisome position: 21.73

GC content: 44.26

Gene sequence:

>366_bases
ATGCCATTCATGGATGAAATACTGCCTGAAACTGCTGAAGCATTCGGAAAACTGAGAAGTTCTATCTTTGAAGGTGGAGA
ACTTGACCGCAAAACCAAGGAACTTATAGCCGTTGCCTCCTCAGTCCTGATGCGTTGCCAGTACTGTGTTGATGTTCATT
CTCAAAGAGCTGTTGCTAATGGAGCAAGCAAAAAAGAAGTTGCAGAAGCCATTGCTGTTGCCATGTTTATAGCCGGAGGC
TCTCAGCTTAACTGGGCGAATAACTACGGCGAAAACGTTTATGATATCATCTTTAAGGAGAAAAAACCCCTGGAGTCCGG
AAAAGAGAAATCGGATGAAGAGAAAGGCTGCTGCTGCGGTAAATAA

Upstream 100 bases:

>100_bases
CATAGTGCTGAATAAGGCGTAACCTGAATATCAACTAAACTTGGTATATGACTCTCCTTCTTTTATAAACTGAAATCGTA
TTATTGAGCGGAGGAATAAA

Downstream 100 bases:

>100_bases
ATAACGGGCTAAGGCTTTGAGTTCGTTTTATCAATTGATTTTCAATCTGTTCTATTTTTTGCTTTTTTCCCATGTCTAAT
CTCATCAGAACTTGAACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Alkylhydroperoxidase-Like Protein; Alkylhydroperoxidase; 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein; Carboxymuconolactone Decarboxylase

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MPFMDEILPETAEAFGKLRSSIFEGGELDRKTKELIAVASSVLMRCQYCVDVHSQRAVANGASKKEVAEAIAVAMFIAGG
SQLNWANNYGENVYDIIFKEKKPLESGKEKSDEEKGCCCGK

Sequences:

>Translated_121_residues
MPFMDEILPETAEAFGKLRSSIFEGGELDRKTKELIAVASSVLMRCQYCVDVHSQRAVANGASKKEVAEAIAVAMFIAGG
SQLNWANNYGENVYDIIFKEKKPLESGKEKSDEEKGCCCGK
>Mature_120_residues
PFMDEILPETAEAFGKLRSSIFEGGELDRKTKELIAVASSVLMRCQYCVDVHSQRAVANGASKKEVAEAIAVAMFIAGGS
QLNWANNYGENVYDIIFKEKKPLESGKEKSDEEKGCCCGK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13257; Mature: 13126

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFMDEILPETAEAFGKLRSSIFEGGELDRKTKELIAVASSVLMRCQYCVDVHSQRAVAN
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GASKKEVAEAIAVAMFIAGGSQLNWANNYGENVYDIIFKEKKPLESGKEKSDEEKGCCCG
CCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
K
C
>Mature Secondary Structure 
PFMDEILPETAEAFGKLRSSIFEGGELDRKTKELIAVASSVLMRCQYCVDVHSQRAVAN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GASKKEVAEAIAVAMFIAGGSQLNWANNYGENVYDIIFKEKKPLESGKEKSDEEKGCCCG
CCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA