| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226795
Identifier: 21226795
GI number: 21226795
Start: 831633
End: 832145
Strand: Direct
Name: 21226795
Synonym: MM_0693
Alternate gene names: NA
Gene position: 831633-832145 (Clockwise)
Preceding gene: 21226794
Following gene: 21226796
Centisome position: 20.3
GC content: 47.95
Gene sequence:
>513_bases TTGATCACCAGAGCCGAAGCGATCAGGTTTCTTGAGGAATCAGGCTGTGCCCCGAATGTGATTGAACACTGCAAAGAGGT CGCCTCGCTTGCAGTTGAGATTGCAGAAAAGGCAAAAGCAGCAGGAAAGGAAGTGGACCTGGAACTTGTGGAAGCGGGGG CCCTTTTGCATGATGCGGGAAGGTGCAGGACACACGGGATTGCACATGCTGTTGAAGGGTTTCGGCTGGCTACGAGCAGG GGAATAGAACCTGAAGTTGCCGAGATAATAAAAAGGCATATCGGAGCCGGAATCTCTAAAGAAGAAGCAAAAGAATTGGG GCTTCCTGAAGACGACTATTTTCCCAGGAGCCTTGAGGAAAAGATTGTTGCGCATGCGGACAACCTTGTAAAAGGAACAA AGAGGATAACGGCACAGGACAGATTGGAGCTCATGCGTAAAAAAAACGTATCTGAAGATGTAATCCAGAGAATAAAGAGG CTGGCTGAAGAAGTGGAAAAACTTTCACACTAA
Upstream 100 bases:
>100_bases CCAATGTGCGGAGAAGACCTGGTTTACTATGACAACTCCCGTTTTGTGGGAGTTCTGAAAAAGCGCGTAGAAGCTTTGAG TTCCGCATAAGGGATTAATC
Downstream 100 bases:
>100_bases ATTCCGGGTTTCTTCAGCTGCAATGAACGCTCAGTCACAAAAAAGAAGGAGTTATTTTATCGAATTGATCCTCCGGTTCC AAATGCGAACGCATTTAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MITRAEAIRFLEESGCAPNVIEHCKEVASLAVEIAEKAKAAGKEVDLELVEAGALLHDAGRCRTHGIAHAVEGFRLATSR GIEPEVAEIIKRHIGAGISKEEAKELGLPEDDYFPRSLEEKIVAHADNLVKGTKRITAQDRLELMRKKNVSEDVIQRIKR LAEEVEKLSH
Sequences:
>Translated_170_residues MITRAEAIRFLEESGCAPNVIEHCKEVASLAVEIAEKAKAAGKEVDLELVEAGALLHDAGRCRTHGIAHAVEGFRLATSR GIEPEVAEIIKRHIGAGISKEEAKELGLPEDDYFPRSLEEKIVAHADNLVKGTKRITAQDRLELMRKKNVSEDVIQRIKR LAEEVEKLSH >Mature_170_residues MITRAEAIRFLEESGCAPNVIEHCKEVASLAVEIAEKAKAAGKEVDLELVEAGALLHDAGRCRTHGIAHAVEGFRLATSR GIEPEVAEIIKRHIGAGISKEEAKELGLPEDDYFPRSLEEKIVAHADNLVKGTKRITAQDRLELMRKKNVSEDVIQRIKR LAEEVEKLSH
Specific function: Unknown
COG id: COG1418
COG function: function code R; Predicted HD superfamily hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004454 - InterPro: IPR003607 - InterPro: IPR006675 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18778; Mature: 18778
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITRAEAIRFLEESGCAPNVIEHCKEVASLAVEIAEKAKAAGKEVDLELVEAGALLHDAG CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RCRTHGIAHAVEGFRLATSRGIEPEVAEIIKRHIGAGISKEEAKELGLPEDDYFPRSLEE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHHH KIVAHADNLVKGTKRITAQDRLELMRKKNVSEDVIQRIKRLAEEVEKLSH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MITRAEAIRFLEESGCAPNVIEHCKEVASLAVEIAEKAKAAGKEVDLELVEAGALLHDAG CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RCRTHGIAHAVEGFRLATSRGIEPEVAEIIKRHIGAGISKEEAKELGLPEDDYFPRSLEE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCHHHHH KIVAHADNLVKGTKRITAQDRLELMRKKNVSEDVIQRIKRLAEEVEKLSH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]