Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226748
Identifier: 21226748
GI number: 21226748
Start: 772652
End: 775174
Strand: Reverse
Name: 21226748
Synonym: MM_0646
Alternate gene names: NA
Gene position: 775174-772652 (Counterclockwise)
Preceding gene: 21226749
Following gene: 21226747
Centisome position: 18.92
GC content: 43.76
Gene sequence:
>2523_bases ATGAATTCTGAGAATCATCCTGCAACAACGTTCAAGTCTAGAATAAAGTCCAGCTTGCCTTATACCCTGGCAGTTGCGAT AATTGGCTTTGTTTCCCTGTGGGTCAGAATGCGCCCTTACGATCATGTGTTTTTGTCCAACGGATTTGTAAAGTTCACGA GTAACGATCCCTGGTACCATATTCGTACCCTGAATGTTCTTCTCGAAAATTATCCTCAAAGGATGTTTTTCAACCCTATG ACCAATTATCCTTATGGCAGTTACATCCATTTCGGTCCTCTTTACGACCAGATGATGGCGATAACATCCTTAATTTTAGG ACTGGGCAGCCCGAGTCAGGATCTTATCAATACTGTTGGTGCTTATTTCCCTGCAGTTCTGGGTGCTCTTACTGTTATTC CTGTTTACTATATCGGAAAATACCTCGGAGGCCGTAAAACCGGCATCCTCGCTGCAGTCTTTATTGCTTTTGCTCCGGGA CAGTTTTTGTCACGCTCACTTATTGGTTTCACGGACCATCACGTGGCTGAGTCTCTATTCAGCACTTTCTTCATGATGTT TTTCATGCTGGCAATAATCACTGCAAAGAAAAAGAATTTGCGTTTTGAAGATTTATTCAATAAAAACTTCATTGTGGTTA AGGAGCCGCTTATTTATTCTATAATTGCTGGTGTCATGTATTCCGCTTACCAGCTTTCCTGGCCAGGAGCTTCTCTTTTC TTGTTTATTGCCCTGGTTTATGCTGTTGTCCAGTATATCCTTGATAACTTTAATGGCGAATCGAGTGATTATCTCGGGTT CACAGGTATTATCACATTTCTGGTAAGTGCGATTCTTATTCTTCCTTTTATTCATCCTGAACTGGGCTTTTCAATGTACT ATTACACCTGGTTCCATGTGGCGACAGCCATTGGCACTATGGCAGGCTTTGCAGCTCTGAGTCTTATCCAGAGGGAATTT AAAAACAGGAATCTAAAAGCTTACTACTATCCTCTGGCAATATTCTTACTTGGCTTCCTGGGACTCCTTGCAATAAGATT TGCATCTCCGTCCGTTTATTCTCTTATTATAAGCGCTCCGAATACCGTATTTGGAGTCCTGACAGGAGGAGCGGCTACAA TTGGTGAAGTTTCCTCTATGTTTTATTATGGAGGCACTTTCACTTTATCGAGAGCCTTTGGAAACTTCACAGTCTCCGGA TTTTTTGCCTCAATAATTGGATTAATTATCCTTCTTGTGAGCGTAATCCGGAAAGCAAAACCTGAAGAAGTGCTGGTTCT GGTCTGGAGTATTTTGATGCTTTTTGCAATTTACGGCCAGAACCGCTTCGCGTACTATTACTCAATTAATGTTTCAATTC TCAGTGCCTACATAGGAGGTTTACTCCTTGAAAAGGTAAAGTGGAATGAACTTGATGAAAAATTCAAGTCCAGTGTAAAA TCTCCTGCAGATATTCCGGGTTTCCTGAAGTCCTTCAGGGCAAAGCAGGTTCTTGCGGTCCTGGCTATAGCAGTTTTTCT TATCTACCCTGTATATGGGGCTGCAATGGTACAATCAACAGGTTCAAATGACCCGGATTGGGCATGGATAGAAGCCTGTT TGTGGCTCAAATCCAGCACTCCTGACCCAGGCATGGACTACAACGCTATTTATGAAGCCCCTGAAGACGGGAAGCTTTTC GATTACCCTGAATCTGCATATGGGGTCATGTCCTGGTGGGACTACGGCCATTACATAGAAACCCTGGGCCACAGGATGCC CAATGCGAACCCTTTCCAGGCAGGGATAGGTGGGCGCAGAGGAAGCATTAATGAAACAAATGTGCCAGGTGCTGCACCCT TTTTAACTGCACAATCCGAAGAAGAAGCAACAGAAGTGCTGGAATCTATTCACCCAGACCCTGAAAAATCCGGGGCGCGT TACATTATGTCCGATGAAAGGATGGCTGTTGATATATTTATGGCAATGCCGGAATGGACTCTTGATACCGAAGGGTATAT GCAACCTTACTGGACAGGTGACGGTTACCAGTACCTCCCTTCCAAACGTTATTTTGATTCGATGGAATCCAGACTCCATT TTCTGGACGGAAACGGGCTTAAACAGTACCGTCTTGTTTATGAAACATGGGCTTATCAAACCCAGGAAGCAGGATACAAG CAGGTCTATAATTTCCTTTATGGCAGCAGCATCCCTGAAGTTGACTCCGGCTATGTCAAGATTTTCGAGTACGTAAAGGG TGCAAAGATTACAGGAACAGTTTCCCCCAATGAAACTGTCAATATAAACACAACAATTTTGACAGGTCAGGGAAGAACGT TTGAGTATTCCCAGTCGACAAGTTCCGACTCTGAAGGCAGGTATGAGTTTATTGTTCCTTACTCAACCGAAGGCCCCATC CCCGGAGAAACACAGTTCGACACTGCACCGACAGGCGCTTATGTCGTAAGCTATGGGGATACGACCACAGAAGTGAGGGT AAGTGAAGAAGCAGTATTAAATGGAGAAGAAATAAAGGTTTGA
Upstream 100 bases:
>100_bases AATTATAAACCTTCAGATTTAATTAATACAATCTGTTCTACTTTCTTCTCACATAAATTATATATTTGATTGTAAAAATC TAGTCCTAAAAGGAATTACT
Downstream 100 bases:
>100_bases AGGGGTATTTCGCCTGGAAGTAAAAAAATAAAGCAGCAAGATGTAAAGCTTGGTTCTCTGCACATCTGCTTTCTTCCAGT CTTTAATTTCCTTTATTATT
Product: oligosaccharyl transferase
Products: NA
Alternate protein names: Oligosaccharyl Transferase; Transmembrane Oligosaccharyl Transferase; Transmembrane Oligosaccharyltransferase; Oligosaccharyltransferase; Oligosaccharyltransferase AglB
Number of amino acids: Translated: 840; Mature: 840
Protein sequence:
>840_residues MNSENHPATTFKSRIKSSLPYTLAVAIIGFVSLWVRMRPYDHVFLSNGFVKFTSNDPWYHIRTLNVLLENYPQRMFFNPM TNYPYGSYIHFGPLYDQMMAITSLILGLGSPSQDLINTVGAYFPAVLGALTVIPVYYIGKYLGGRKTGILAAVFIAFAPG QFLSRSLIGFTDHHVAESLFSTFFMMFFMLAIITAKKKNLRFEDLFNKNFIVVKEPLIYSIIAGVMYSAYQLSWPGASLF LFIALVYAVVQYILDNFNGESSDYLGFTGIITFLVSAILILPFIHPELGFSMYYYTWFHVATAIGTMAGFAALSLIQREF KNRNLKAYYYPLAIFLLGFLGLLAIRFASPSVYSLIISAPNTVFGVLTGGAATIGEVSSMFYYGGTFTLSRAFGNFTVSG FFASIIGLIILLVSVIRKAKPEEVLVLVWSILMLFAIYGQNRFAYYYSINVSILSAYIGGLLLEKVKWNELDEKFKSSVK SPADIPGFLKSFRAKQVLAVLAIAVFLIYPVYGAAMVQSTGSNDPDWAWIEACLWLKSSTPDPGMDYNAIYEAPEDGKLF DYPESAYGVMSWWDYGHYIETLGHRMPNANPFQAGIGGRRGSINETNVPGAAPFLTAQSEEEATEVLESIHPDPEKSGAR YIMSDERMAVDIFMAMPEWTLDTEGYMQPYWTGDGYQYLPSKRYFDSMESRLHFLDGNGLKQYRLVYETWAYQTQEAGYK QVYNFLYGSSIPEVDSGYVKIFEYVKGAKITGTVSPNETVNINTTILTGQGRTFEYSQSTSSDSEGRYEFIVPYSTEGPI PGETQFDTAPTGAYVVSYGDTTTEVRVSEEAVLNGEEIKV
Sequences:
>Translated_840_residues MNSENHPATTFKSRIKSSLPYTLAVAIIGFVSLWVRMRPYDHVFLSNGFVKFTSNDPWYHIRTLNVLLENYPQRMFFNPM TNYPYGSYIHFGPLYDQMMAITSLILGLGSPSQDLINTVGAYFPAVLGALTVIPVYYIGKYLGGRKTGILAAVFIAFAPG QFLSRSLIGFTDHHVAESLFSTFFMMFFMLAIITAKKKNLRFEDLFNKNFIVVKEPLIYSIIAGVMYSAYQLSWPGASLF LFIALVYAVVQYILDNFNGESSDYLGFTGIITFLVSAILILPFIHPELGFSMYYYTWFHVATAIGTMAGFAALSLIQREF KNRNLKAYYYPLAIFLLGFLGLLAIRFASPSVYSLIISAPNTVFGVLTGGAATIGEVSSMFYYGGTFTLSRAFGNFTVSG FFASIIGLIILLVSVIRKAKPEEVLVLVWSILMLFAIYGQNRFAYYYSINVSILSAYIGGLLLEKVKWNELDEKFKSSVK SPADIPGFLKSFRAKQVLAVLAIAVFLIYPVYGAAMVQSTGSNDPDWAWIEACLWLKSSTPDPGMDYNAIYEAPEDGKLF DYPESAYGVMSWWDYGHYIETLGHRMPNANPFQAGIGGRRGSINETNVPGAAPFLTAQSEEEATEVLESIHPDPEKSGAR YIMSDERMAVDIFMAMPEWTLDTEGYMQPYWTGDGYQYLPSKRYFDSMESRLHFLDGNGLKQYRLVYETWAYQTQEAGYK QVYNFLYGSSIPEVDSGYVKIFEYVKGAKITGTVSPNETVNINTTILTGQGRTFEYSQSTSSDSEGRYEFIVPYSTEGPI PGETQFDTAPTGAYVVSYGDTTTEVRVSEEAVLNGEEIKV >Mature_840_residues MNSENHPATTFKSRIKSSLPYTLAVAIIGFVSLWVRMRPYDHVFLSNGFVKFTSNDPWYHIRTLNVLLENYPQRMFFNPM TNYPYGSYIHFGPLYDQMMAITSLILGLGSPSQDLINTVGAYFPAVLGALTVIPVYYIGKYLGGRKTGILAAVFIAFAPG QFLSRSLIGFTDHHVAESLFSTFFMMFFMLAIITAKKKNLRFEDLFNKNFIVVKEPLIYSIIAGVMYSAYQLSWPGASLF LFIALVYAVVQYILDNFNGESSDYLGFTGIITFLVSAILILPFIHPELGFSMYYYTWFHVATAIGTMAGFAALSLIQREF KNRNLKAYYYPLAIFLLGFLGLLAIRFASPSVYSLIISAPNTVFGVLTGGAATIGEVSSMFYYGGTFTLSRAFGNFTVSG FFASIIGLIILLVSVIRKAKPEEVLVLVWSILMLFAIYGQNRFAYYYSINVSILSAYIGGLLLEKVKWNELDEKFKSSVK SPADIPGFLKSFRAKQVLAVLAIAVFLIYPVYGAAMVQSTGSNDPDWAWIEACLWLKSSTPDPGMDYNAIYEAPEDGKLF DYPESAYGVMSWWDYGHYIETLGHRMPNANPFQAGIGGRRGSINETNVPGAAPFLTAQSEEEATEVLESIHPDPEKSGAR YIMSDERMAVDIFMAMPEWTLDTEGYMQPYWTGDGYQYLPSKRYFDSMESRLHFLDGNGLKQYRLVYETWAYQTQEAGYK QVYNFLYGSSIPEVDSGYVKIFEYVKGAKITGTVSPNETVNINTTILTGQGRTFEYSQSTSSDSEGRYEFIVPYSTEGPI PGETQFDTAPTGAYVVSYGDTTTEVRVSEEAVLNGEEIKV
Specific function: Unknown
COG id: COG1287
COG function: function code R; Uncharacterized membrane protein, required for N-linked glycosylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 94030; Mature: 94030
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSENHPATTFKSRIKSSLPYTLAVAIIGFVSLWVRMRPYDHVFLSNGFVKFTSNDPWYH CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCEEE IRTLNVLLENYPQRMFFNPMTNYPYGSYIHFGPLYDQMMAITSLILGLGSPSQDLINTVG EHHHHHHHHHCCHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHH AYFPAVLGALTVIPVYYIGKYLGGRKTGILAAVFIAFAPGQFLSRSLIGFTDHHVAESLF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH STFFMMFFMLAIITAKKKNLRFEDLFNKNFIVVKEPLIYSIIAGVMYSAYQLSWPGASLF HHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHEECCCCHHHH LFIALVYAVVQYILDNFNGESSDYLGFTGIITFLVSAILILPFIHPELGFSMYYYTWFHV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHH ATAIGTMAGFAALSLIQREFKNRNLKAYYYPLAIFLLGFLGLLAIRFASPSVYSLIISAP HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC NTVFGVLTGGAATIGEVSSMFYYGGTFTLSRAFGNFTVSGFFASIIGLIILLVSVIRKAK CCEEEEECCCCHHHHHHHHHHEECCEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC PEEVLVLVWSILMLFAIYGQNRFAYYYSINVSILSAYIGGLLLEKVKWNELDEKFKSSVK CHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPADIPGFLKSFRAKQVLAVLAIAVFLIYPVYGAAMVQSTGSNDPDWAWIEACLWLKSST CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC PDPGMDYNAIYEAPEDGKLFDYPESAYGVMSWWDYGHYIETLGHRMPNANPFQAGIGGRR CCCCCCCCCEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GSINETNVPGAAPFLTAQSEEEATEVLESIHPDPEKSGARYIMSDERMAVDIFMAMPEWT CCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEECCCCC LDTEGYMQPYWTGDGYQYLPSKRYFDSMESRLHFLDGNGLKQYRLVYETWAYQTQEAGYK CCCCCCCCCEECCCCCEECCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHH QVYNFLYGSSIPEVDSGYVKIFEYVKGAKITGTVSPNETVNINTTILTGQGRTFEYSQST HHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEECCCCEEEECCCC SSDSEGRYEFIVPYSTEGPIPGETQFDTAPTGAYVVSYGDTTTEVRVSEEAVLNGEEIKV CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECHHHHCCCCCCCC >Mature Secondary Structure MNSENHPATTFKSRIKSSLPYTLAVAIIGFVSLWVRMRPYDHVFLSNGFVKFTSNDPWYH CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCEEE IRTLNVLLENYPQRMFFNPMTNYPYGSYIHFGPLYDQMMAITSLILGLGSPSQDLINTVG EHHHHHHHHHCCHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHH AYFPAVLGALTVIPVYYIGKYLGGRKTGILAAVFIAFAPGQFLSRSLIGFTDHHVAESLF HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH STFFMMFFMLAIITAKKKNLRFEDLFNKNFIVVKEPLIYSIIAGVMYSAYQLSWPGASLF HHHHHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHEECCCCHHHH LFIALVYAVVQYILDNFNGESSDYLGFTGIITFLVSAILILPFIHPELGFSMYYYTWFHV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHH ATAIGTMAGFAALSLIQREFKNRNLKAYYYPLAIFLLGFLGLLAIRFASPSVYSLIISAP HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECC NTVFGVLTGGAATIGEVSSMFYYGGTFTLSRAFGNFTVSGFFASIIGLIILLVSVIRKAK CCEEEEECCCCHHHHHHHHHHEECCEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC PEEVLVLVWSILMLFAIYGQNRFAYYYSINVSILSAYIGGLLLEKVKWNELDEKFKSSVK CHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPADIPGFLKSFRAKQVLAVLAIAVFLIYPVYGAAMVQSTGSNDPDWAWIEACLWLKSST CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC PDPGMDYNAIYEAPEDGKLFDYPESAYGVMSWWDYGHYIETLGHRMPNANPFQAGIGGRR CCCCCCCCCEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC GSINETNVPGAAPFLTAQSEEEATEVLESIHPDPEKSGARYIMSDERMAVDIFMAMPEWT CCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEECCCCC LDTEGYMQPYWTGDGYQYLPSKRYFDSMESRLHFLDGNGLKQYRLVYETWAYQTQEAGYK CCCCCCCCCEECCCCCEECCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHH QVYNFLYGSSIPEVDSGYVKIFEYVKGAKITGTVSPNETVNINTTILTGQGRTFEYSQST HHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEECCCCEEEECCCC SSDSEGRYEFIVPYSTEGPIPGETQFDTAPTGAYVVSYGDTTTEVRVSEEAVLNGEEIKV CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA