Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226746
Identifier: 21226746
GI number: 21226746
Start: 770972
End: 771862
Strand: Reverse
Name: 21226746
Synonym: MM_0644
Alternate gene names: NA
Gene position: 771862-770972 (Counterclockwise)
Preceding gene: 21226747
Following gene: 21226745
Centisome position: 18.84
GC content: 46.35
Gene sequence:
>891_bases ATGATTTTTCCAGACGAGTACAAATATGTGGGAGTGACTAAAGTGCTCCCCGAAAGCACTGAGGAGCCGGTTTATTTCCT TACGGAGTACCTTATTGAAGAAAGGGAAAAACCCGAAAAAGGCAGTTCTGAGAAAGGCAGTTCTGAGTATACAGTTTACC GCGTTAAAAAAAGCGGAGACGGGTTTCTAAGGAAAGTGGAAGCCCTTGAGACGATCGCCTCAGGAGAAGAGGTTGTCAAA TATGATAAGGAACTGAACATCAAGGACCGTGCCCTCCTGATCGAGACGGCGTTAAAACTCTGTACTGGCAGGGTAAACAC TGTCATTTTTACGGGTGTGGACAGGCATGTTACCATAGTCCACGAGCCGGACCCTTCCGCTATTCTCGAAATAGAAATTC TTGATGTTGCTCCTCCTGAGCCTGCATGGCTTTCCCAGGTAGTGAGGAGGCTTGAAGCCAGTGGGATTTTCGGGGATCTG CAGGTCAGGTTTACTGAGAATATTGTTGACCTCAGGCGTTTTGAAGGGGAAAAATCTGTCTTCCCATGCAGTTCATCAGG GCTTGAAGGGAAATGCCTTGACTCGGATATTCTTACCGAAGACGGGCACCTGCTTGTAGGATGCGAAATCTCAAAGACTC TTTTTGAGATGCGTTTTCCTGAACTTGAATATTCTTTCATAAACATCTGCCCTTTTAAATCCGAAATAGTTGTGCCTTCA AAATCCTTTATTACACGCTGCTGCAGGTCGGAAAAGTCAGGGCTTGTAAATATTTCAGGTTTTGAAGGGGCTGTTGTCCA CTGGGGAGCATCGGAATACCAGGTTTCCGAAGCGGTCCGAAATCTTGTAACCAGGATCAGGAATAAAAACAGTTCCGCCC AGGACCGGTAA
Upstream 100 bases:
>100_bases AGTTTAACGGACGATTATAGCAAAATTAATGAAATATGCTTTGTTGCCTGGTCTGTAGATTGATCGGGCCAGCAGGGTAA CAGCATCAAAAGCGATATTT
Downstream 100 bases:
>100_bases ATGCAGCCAGAAAACCTTTAAGTGCCGGATAACCTATTATCCCGGGATCTCATGTATAAAACGAAGTCGGAGTTACTTTT TCATGTCTTTTCTTACAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MIFPDEYKYVGVTKVLPESTEEPVYFLTEYLIEEREKPEKGSSEKGSSEYTVYRVKKSGDGFLRKVEALETIASGEEVVK YDKELNIKDRALLIETALKLCTGRVNTVIFTGVDRHVTIVHEPDPSAILEIEILDVAPPEPAWLSQVVRRLEASGIFGDL QVRFTENIVDLRRFEGEKSVFPCSSSGLEGKCLDSDILTEDGHLLVGCEISKTLFEMRFPELEYSFINICPFKSEIVVPS KSFITRCCRSEKSGLVNISGFEGAVVHWGASEYQVSEAVRNLVTRIRNKNSSAQDR
Sequences:
>Translated_296_residues MIFPDEYKYVGVTKVLPESTEEPVYFLTEYLIEEREKPEKGSSEKGSSEYTVYRVKKSGDGFLRKVEALETIASGEEVVK YDKELNIKDRALLIETALKLCTGRVNTVIFTGVDRHVTIVHEPDPSAILEIEILDVAPPEPAWLSQVVRRLEASGIFGDL QVRFTENIVDLRRFEGEKSVFPCSSSGLEGKCLDSDILTEDGHLLVGCEISKTLFEMRFPELEYSFINICPFKSEIVVPS KSFITRCCRSEKSGLVNISGFEGAVVHWGASEYQVSEAVRNLVTRIRNKNSSAQDR >Mature_296_residues MIFPDEYKYVGVTKVLPESTEEPVYFLTEYLIEEREKPEKGSSEKGSSEYTVYRVKKSGDGFLRKVEALETIASGEEVVK YDKELNIKDRALLIETALKLCTGRVNTVIFTGVDRHVTIVHEPDPSAILEIEILDVAPPEPAWLSQVVRRLEASGIFGDL QVRFTENIVDLRRFEGEKSVFPCSSSGLEGKCLDSDILTEDGHLLVGCEISKTLFEMRFPELEYSFINICPFKSEIVVPS KSFITRCCRSEKSGLVNISGFEGAVVHWGASEYQVSEAVRNLVTRIRNKNSSAQDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33303; Mature: 33303
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFPDEYKYVGVTKVLPESTEEPVYFLTEYLIEEREKPEKGSSEKGSSEYTVYRVKKSGD CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC GFLRKVEALETIASGEEVVKYDKELNIKDRALLIETALKLCTGRVNTVIFTGVDRHVTIV HHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEE HEPDPSAILEIEILDVAPPEPAWLSQVVRRLEASGIFGDLQVRFTENIVDLRRFEGEKSV ECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHCCCCCCC FPCSSSGLEGKCLDSDILTEDGHLLVGCEISKTLFEMRFPELEYSFINICPFKSEIVVPS CCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCEEEEEECCCCCEEECCC KSFITRCCRSEKSGLVNISGFEGAVVHWGASEYQVSEAVRNLVTRIRNKNSSAQDR HHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MIFPDEYKYVGVTKVLPESTEEPVYFLTEYLIEEREKPEKGSSEKGSSEYTVYRVKKSGD CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC GFLRKVEALETIASGEEVVKYDKELNIKDRALLIETALKLCTGRVNTVIFTGVDRHVTIV HHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEE HEPDPSAILEIEILDVAPPEPAWLSQVVRRLEASGIFGDLQVRFTENIVDLRRFEGEKSV ECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHCCCCCCC FPCSSSGLEGKCLDSDILTEDGHLLVGCEISKTLFEMRFPELEYSFINICPFKSEIVVPS CCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCEEEEEECCCCCEEECCC KSFITRCCRSEKSGLVNISGFEGAVVHWGASEYQVSEAVRNLVTRIRNKNSSAQDR HHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA