Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226746

Identifier: 21226746

GI number: 21226746

Start: 770972

End: 771862

Strand: Reverse

Name: 21226746

Synonym: MM_0644

Alternate gene names: NA

Gene position: 771862-770972 (Counterclockwise)

Preceding gene: 21226747

Following gene: 21226745

Centisome position: 18.84

GC content: 46.35

Gene sequence:

>891_bases
ATGATTTTTCCAGACGAGTACAAATATGTGGGAGTGACTAAAGTGCTCCCCGAAAGCACTGAGGAGCCGGTTTATTTCCT
TACGGAGTACCTTATTGAAGAAAGGGAAAAACCCGAAAAAGGCAGTTCTGAGAAAGGCAGTTCTGAGTATACAGTTTACC
GCGTTAAAAAAAGCGGAGACGGGTTTCTAAGGAAAGTGGAAGCCCTTGAGACGATCGCCTCAGGAGAAGAGGTTGTCAAA
TATGATAAGGAACTGAACATCAAGGACCGTGCCCTCCTGATCGAGACGGCGTTAAAACTCTGTACTGGCAGGGTAAACAC
TGTCATTTTTACGGGTGTGGACAGGCATGTTACCATAGTCCACGAGCCGGACCCTTCCGCTATTCTCGAAATAGAAATTC
TTGATGTTGCTCCTCCTGAGCCTGCATGGCTTTCCCAGGTAGTGAGGAGGCTTGAAGCCAGTGGGATTTTCGGGGATCTG
CAGGTCAGGTTTACTGAGAATATTGTTGACCTCAGGCGTTTTGAAGGGGAAAAATCTGTCTTCCCATGCAGTTCATCAGG
GCTTGAAGGGAAATGCCTTGACTCGGATATTCTTACCGAAGACGGGCACCTGCTTGTAGGATGCGAAATCTCAAAGACTC
TTTTTGAGATGCGTTTTCCTGAACTTGAATATTCTTTCATAAACATCTGCCCTTTTAAATCCGAAATAGTTGTGCCTTCA
AAATCCTTTATTACACGCTGCTGCAGGTCGGAAAAGTCAGGGCTTGTAAATATTTCAGGTTTTGAAGGGGCTGTTGTCCA
CTGGGGAGCATCGGAATACCAGGTTTCCGAAGCGGTCCGAAATCTTGTAACCAGGATCAGGAATAAAAACAGTTCCGCCC
AGGACCGGTAA

Upstream 100 bases:

>100_bases
AGTTTAACGGACGATTATAGCAAAATTAATGAAATATGCTTTGTTGCCTGGTCTGTAGATTGATCGGGCCAGCAGGGTAA
CAGCATCAAAAGCGATATTT

Downstream 100 bases:

>100_bases
ATGCAGCCAGAAAACCTTTAAGTGCCGGATAACCTATTATCCCGGGATCTCATGTATAAAACGAAGTCGGAGTTACTTTT
TCATGTCTTTTCTTACAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MIFPDEYKYVGVTKVLPESTEEPVYFLTEYLIEEREKPEKGSSEKGSSEYTVYRVKKSGDGFLRKVEALETIASGEEVVK
YDKELNIKDRALLIETALKLCTGRVNTVIFTGVDRHVTIVHEPDPSAILEIEILDVAPPEPAWLSQVVRRLEASGIFGDL
QVRFTENIVDLRRFEGEKSVFPCSSSGLEGKCLDSDILTEDGHLLVGCEISKTLFEMRFPELEYSFINICPFKSEIVVPS
KSFITRCCRSEKSGLVNISGFEGAVVHWGASEYQVSEAVRNLVTRIRNKNSSAQDR

Sequences:

>Translated_296_residues
MIFPDEYKYVGVTKVLPESTEEPVYFLTEYLIEEREKPEKGSSEKGSSEYTVYRVKKSGDGFLRKVEALETIASGEEVVK
YDKELNIKDRALLIETALKLCTGRVNTVIFTGVDRHVTIVHEPDPSAILEIEILDVAPPEPAWLSQVVRRLEASGIFGDL
QVRFTENIVDLRRFEGEKSVFPCSSSGLEGKCLDSDILTEDGHLLVGCEISKTLFEMRFPELEYSFINICPFKSEIVVPS
KSFITRCCRSEKSGLVNISGFEGAVVHWGASEYQVSEAVRNLVTRIRNKNSSAQDR
>Mature_296_residues
MIFPDEYKYVGVTKVLPESTEEPVYFLTEYLIEEREKPEKGSSEKGSSEYTVYRVKKSGDGFLRKVEALETIASGEEVVK
YDKELNIKDRALLIETALKLCTGRVNTVIFTGVDRHVTIVHEPDPSAILEIEILDVAPPEPAWLSQVVRRLEASGIFGDL
QVRFTENIVDLRRFEGEKSVFPCSSSGLEGKCLDSDILTEDGHLLVGCEISKTLFEMRFPELEYSFINICPFKSEIVVPS
KSFITRCCRSEKSGLVNISGFEGAVVHWGASEYQVSEAVRNLVTRIRNKNSSAQDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33303; Mature: 33303

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFPDEYKYVGVTKVLPESTEEPVYFLTEYLIEEREKPEKGSSEKGSSEYTVYRVKKSGD
CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC
GFLRKVEALETIASGEEVVKYDKELNIKDRALLIETALKLCTGRVNTVIFTGVDRHVTIV
HHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEE
HEPDPSAILEIEILDVAPPEPAWLSQVVRRLEASGIFGDLQVRFTENIVDLRRFEGEKSV
ECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHCCCCCCC
FPCSSSGLEGKCLDSDILTEDGHLLVGCEISKTLFEMRFPELEYSFINICPFKSEIVVPS
CCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCEEEEEECCCCCEEECCC
KSFITRCCRSEKSGLVNISGFEGAVVHWGASEYQVSEAVRNLVTRIRNKNSSAQDR
HHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIFPDEYKYVGVTKVLPESTEEPVYFLTEYLIEEREKPEKGSSEKGSSEYTVYRVKKSGD
CCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCC
GFLRKVEALETIASGEEVVKYDKELNIKDRALLIETALKLCTGRVNTVIFTGVDRHVTIV
HHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEE
HEPDPSAILEIEILDVAPPEPAWLSQVVRRLEASGIFGDLQVRFTENIVDLRRFEGEKSV
ECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHHCCCCCCC
FPCSSSGLEGKCLDSDILTEDGHLLVGCEISKTLFEMRFPELEYSFINICPFKSEIVVPS
CCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCEEEEEECCCCCEEECCC
KSFITRCCRSEKSGLVNISGFEGAVVHWGASEYQVSEAVRNLVTRIRNKNSSAQDR
HHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA