| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226731
Identifier: 21226731
GI number: 21226731
Start: 760739
End: 760969
Strand: Direct
Name: 21226731
Synonym: MM_0629
Alternate gene names: NA
Gene position: 760739-760969 (Clockwise)
Preceding gene: 21226727
Following gene: 21226732
Centisome position: 18.57
GC content: 42.86
Gene sequence:
>231_bases ATGAAATGCTATGAATGTGCCCTTGAGGGCAAAGATACGGATGCTGTGGGAATTTGTATCGTATGTGGGAGAGGGGTTTG TAAAGAGCACCTTATACATGAAGAAACCCCTGTATGGGAAGGCAACTATCCTATTCAACTCAAGCCTGACCAGGAACACA TAAAAAGAATTGTCTGTGTTCCCTGCCACATAGCTTTGAAAGAGAACTGTCTGTTTAACGAAGTGTGTTGA
Upstream 100 bases:
>100_bases GAATAATGAAAGAGCCAGAGACTTTTTCATATAAAAATTAAATCAGACCTGAAATAACTGGTACTGGAATAATGTTTTCT GATCTGGAGGTCGACGAGCA
Downstream 100 bases:
>100_bases GGTGGTCAAATATGCTGAAATGTTACGATTGCCTTGAAAATAATAAAGATAGTGAAGCAGTAGGAGTATGCATCGTCTGC GGAAAAGGCCTTTGCATGGA
Product: Zinc finger protein
Products: NA
Alternate protein names: Conserved Zinc Finger Protein AF
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MKCYECALEGKDTDAVGICIVCGRGVCKEHLIHEETPVWEGNYPIQLKPDQEHIKRIVCVPCHIALKENCLFNEVC
Sequences:
>Translated_76_residues MKCYECALEGKDTDAVGICIVCGRGVCKEHLIHEETPVWEGNYPIQLKPDQEHIKRIVCVPCHIALKENCLFNEVC >Mature_76_residues MKCYECALEGKDTDAVGICIVCGRGVCKEHLIHEETPVWEGNYPIQLKPDQEHIKRIVCVPCHIALKENCLFNEVC
Specific function: Unknown
COG id: COG4855
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8614; Mature: 8614
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 13.2 %Cys+Met (Translated Protein) 11.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 13.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCYECALEGKDTDAVGICIVCGRGVCKEHLIHEETPVWEGNYPIQLKPDQEHIKRIVCV CCCCCCEECCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCEEECCCHHHHCEEEEC PCHIALKENCLFNEVC CCEEEECCCCCCCCCC >Mature Secondary Structure MKCYECALEGKDTDAVGICIVCGRGVCKEHLIHEETPVWEGNYPIQLKPDQEHIKRIVCV CCCCCCEECCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCEEECCCHHHHCEEEEC PCHIALKENCLFNEVC CCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA