| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226727
Identifier: 21226727
GI number: 21226727
Start: 756418
End: 757008
Strand: Direct
Name: 21226727
Synonym: MM_0625
Alternate gene names: NA
Gene position: 756418-757008 (Clockwise)
Preceding gene: 21226726
Following gene: 21226731
Centisome position: 18.47
GC content: 42.98
Gene sequence:
>591_bases ATGCTCATAGGACTCACAGGTACGCCGGGAACAGGAAAAACCTCAGTAAGCAAACTTCTCGAAAAACGCAGGGGATGGAA AGTGGTCTACCTTAATGATCTCATAAAGGAAGAACATCTGTACTCAGAAGTCGATGAAGAAAGGGACTCCGTAATTGCTG ACATGGAACTCATCAGGGAGCGCCTTTCCGGCATTCTTGAAGAAGAAAAGGGACAGCATGCCGAAAAGGCAAAAGTAAAT GGGGAGGAAAAGGAAAACATTACCATCATCGAAAGCCACCTTGCTCATTACATAACAGACATTGTAATAGTGCTCAGGGC TTATCCTCCCGAACTGAAAAAAAGGCTTGAAAAACGAGGATATTCTGAAGAAAAAATTAACGAAAACGCAGAAGCCGAGT CAATTGATTTGATCCTGGCAGAAGCTTTTGAATGGTGCAAAAAAGTCTTTGAAGTAAATACGACCGGCAGGACTGCAGAA GAGACTTTGGGAGATGTGGAAAAGATTATAGATTATATTCTTGCTGGCAAAGAAAACGAACTGCAGGAATACATTCCGGG CTCACTTGACTGGATTGATTCTGTGCCCTGA
Upstream 100 bases:
>100_bases CGAATAGCCGATAGACACAGGCACTGGTACAGAAATCCCAGCACTCAGATTTTTCAGGGCGGCATTAAGTATAACTCCGA TAAACCCTATCTCCTCCTCC
Downstream 100 bases:
>100_bases AAGATACTCTAAAAACCATAAGAAGCTTAAAAGAAGATTATTGCATAAAAATGGTCATAAAGAAAAATTGCTGTCACTGG TAGAAACATTCTTCAGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-AMP transphosphorylase
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLIGLTGTPGTGKTSVSKLLEKRRGWKVVYLNDLIKEEHLYSEVDEERDSVIADMELIRERLSGILEEEKGQHAEKAKVN GEEKENITIIESHLAHYITDIVIVLRAYPPELKKRLEKRGYSEEKINENAEAESIDLILAEAFEWCKKVFEVNTTGRTAE ETLGDVEKIIDYILAGKENELQEYIPGSLDWIDSVP
Sequences:
>Translated_196_residues MLIGLTGTPGTGKTSVSKLLEKRRGWKVVYLNDLIKEEHLYSEVDEERDSVIADMELIRERLSGILEEEKGQHAEKAKVN GEEKENITIIESHLAHYITDIVIVLRAYPPELKKRLEKRGYSEEKINENAEAESIDLILAEAFEWCKKVFEVNTTGRTAE ETLGDVEKIIDYILAGKENELQEYIPGSLDWIDSVP >Mature_196_residues MLIGLTGTPGTGKTSVSKLLEKRRGWKVVYLNDLIKEEHLYSEVDEERDSVIADMELIRERLSGILEEEKGQHAEKAKVN GEEKENITIIESHLAHYITDIVIVLRAYPPELKKRLEKRGYSEEKINENAEAESIDLILAEAFEWCKKVFEVNTTGRTAE ETLGDVEKIIDYILAGKENELQEYIPGSLDWIDSVP
Specific function: Unknown
COG id: COG1936
COG function: function code F; Predicted nucleotide kinase (related to CMP and AMP kinases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family. AK6 subfamily
Homologues:
Organism=Homo sapiens, GI7706212, Length=175, Percent_Identity=30.8571428571429, Blast_Score=74, Evalue=9e-14, Organism=Homo sapiens, GI62865612, Length=171, Percent_Identity=29.8245614035088, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17532769, Length=146, Percent_Identity=28.0821917808219, Blast_Score=64, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6320035, Length=173, Percent_Identity=27.7456647398844, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KAD6_METMA (Q8PZ69)
Other databases:
- EMBL: AE008384 - RefSeq: NP_632649.1 - ProteinModelPortal: Q8PZ69 - SMR: Q8PZ69 - GeneID: 1478967 - GenomeReviews: AE008384_GR - KEGG: mma:MM_0625 - NMPDR: fig|192952.1.peg.625 - HOGENOM: HBG646389 - OMA: RVGIVDW - ProtClustDB: CLSK450466 - BioCyc: MMAZ192952:MM0625-MONOMER - BRENDA: 2.7.4.3 - HAMAP: MF_00039 - InterPro: IPR020618
Pfam domain/function: NA
EC number: =2.7.4.3
Molecular weight: Translated: 22344; Mature: 22344
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGLTGTPGTGKTSVSKLLEKRRGWKVVYLNDLIKEEHLYSEVDEERDSVIADMELIRE CEEECCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSGILEEEKGQHAEKAKVNGEEKENITIIESHLAHYITDIVIVLRAYPPELKKRLEKRG HHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC YSEEKINENAEAESIDLILAEAFEWCKKVFEVNTTGRTAEETLGDVEKIIDYILAGKENE CCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHH LQEYIPGSLDWIDSVP HHHHCCCCCCHHCCCC >Mature Secondary Structure MLIGLTGTPGTGKTSVSKLLEKRRGWKVVYLNDLIKEEHLYSEVDEERDSVIADMELIRE CEEECCCCCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLSGILEEEKGQHAEKAKVNGEEKENITIIESHLAHYITDIVIVLRAYPPELKKRLEKRG HHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC YSEEKINENAEAESIDLILAEAFEWCKKVFEVNTTGRTAEETLGDVEKIIDYILAGKENE CCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHH LQEYIPGSLDWIDSVP HHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12125824