| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226726
Identifier: 21226726
GI number: 21226726
Start: 755503
End: 756234
Strand: Direct
Name: 21226726
Synonym: MM_0624
Alternate gene names: NA
Gene position: 755503-756234 (Clockwise)
Preceding gene: 21226725
Following gene: 21226727
Centisome position: 18.44
GC content: 34.29
Gene sequence:
>732_bases TTGATAGTATTAACCGGACTATTCATTGTTGAGATGAATCTAAGAGACTGGAGGGCTGACGAATTAAGGCCACATTACGA ATATACGGTTAAAATAAGTGGTCTTTCAGGAACTGAAGTATTGGGAACAACTAAAATTTTAGTTCCAATTCCTGCAACAA AAGAAGGAGTTTTTGCAATCACACCTTCTCAGAAAGAACCGTCTTTTTTCAAAAGTCTCCTGCAAGAGCATTTTTTCCAC ACACCAGAGAAGTACATAAAAGGAATATATTTTGAAAATACTACTGAGTCACTCGACAATGAATCACTTAATGGAAACTG GACGAGTTCTATTGTAAATACCAAACATGGTCCAATGCTGGAATTCAGGACAAACGAATCTGTTCTTACAGATATTTCCT TTTCAAAGATTGTAGTATTGGAACAGATGAACAATAAAGACCCTATTAATGAAAACAGTCCTATATTATATCCGATTGCA GGTGAAGTATCATTAGTAGGAGAAGATTATCAATACTTTCGATTAATGTCCCGAGTAATCACATATGAAACTTATATTGA AATGAGTGATAATATCAACAGTAAAGCCATAAAATTTGATATTAGCCTTGAAGTCTATCCAGATGTTACTGAACGCGATA GAGGTAAAGGAACTTATAAAAATAAACTGGATGTGGTTGTTGCCGAATCCGGCGAATTAAAAAAGAATGCCACAATTGAA ACATATTTGTAA
Upstream 100 bases:
>100_bases TAATCAGAACTTTTGTTGAATCTTCTCATTTTCTCATTTTTCATTCAAGGATGATGAAACAATGAAAAAAATAACCACTT ATTTGTTATTAATACTCTTA
Downstream 100 bases:
>100_bases CTTATTTTTTAATTTCATTGTTAATTTCCATTTTTTCGGGAAAGGTCGGTCGTGCTCTCACGACTGGTGAAAGCATGGGG ACCCGAATAGCCGATAGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MIVLTGLFIVEMNLRDWRADELRPHYEYTVKISGLSGTEVLGTTKILVPIPATKEGVFAITPSQKEPSFFKSLLQEHFFH TPEKYIKGIYFENTTESLDNESLNGNWTSSIVNTKHGPMLEFRTNESVLTDISFSKIVVLEQMNNKDPINENSPILYPIA GEVSLVGEDYQYFRLMSRVITYETYIEMSDNINSKAIKFDISLEVYPDVTERDRGKGTYKNKLDVVVAESGELKKNATIE TYL
Sequences:
>Translated_243_residues MIVLTGLFIVEMNLRDWRADELRPHYEYTVKISGLSGTEVLGTTKILVPIPATKEGVFAITPSQKEPSFFKSLLQEHFFH TPEKYIKGIYFENTTESLDNESLNGNWTSSIVNTKHGPMLEFRTNESVLTDISFSKIVVLEQMNNKDPINENSPILYPIA GEVSLVGEDYQYFRLMSRVITYETYIEMSDNINSKAIKFDISLEVYPDVTERDRGKGTYKNKLDVVVAESGELKKNATIE TYL >Mature_243_residues MIVLTGLFIVEMNLRDWRADELRPHYEYTVKISGLSGTEVLGTTKILVPIPATKEGVFAITPSQKEPSFFKSLLQEHFFH TPEKYIKGIYFENTTESLDNESLNGNWTSSIVNTKHGPMLEFRTNESVLTDISFSKIVVLEQMNNKDPINENSPILYPIA GEVSLVGEDYQYFRLMSRVITYETYIEMSDNINSKAIKFDISLEVYPDVTERDRGKGTYKNKLDVVVAESGELKKNATIE TYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27729; Mature: 27729
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLTGLFIVEMNLRDWRADELRPHYEYTVKISGLSGTEVLGTTKILVPIPATKEGVFAI CEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEECCEEEEEECCCCCCCEEEE TPSQKEPSFFKSLLQEHFFHTPEKYIKGIYFENTTESLDNESLNGNWTSSIVNTKHGPML CCCCCCHHHHHHHHHHHCCCCCHHHHCEEEECCCCCCCCCCCCCCCEEHHEEECCCCCEE EFRTNESVLTDISFSKIVVLEQMNNKDPINENSPILYPIAGEVSLVGEDYQYFRLMSRVI EEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHH TYETYIEMSDNINSKAIKFDISLEVYPDVTERDRGKGTYKNKLDVVVAESGELKKNATIE HHEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEE TYL ECC >Mature Secondary Structure MIVLTGLFIVEMNLRDWRADELRPHYEYTVKISGLSGTEVLGTTKILVPIPATKEGVFAI CEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCEEECCEEEEEECCCCCCCEEEE TPSQKEPSFFKSLLQEHFFHTPEKYIKGIYFENTTESLDNESLNGNWTSSIVNTKHGPML CCCCCCHHHHHHHHHHHCCCCCHHHHCEEEECCCCCCCCCCCCCCCEEHHEEECCCCCEE EFRTNESVLTDISFSKIVVLEQMNNKDPINENSPILYPIAGEVSLVGEDYQYFRLMSRVI EEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHH TYETYIEMSDNINSKAIKFDISLEVYPDVTERDRGKGTYKNKLDVVVAESGELKKNATIE HHEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEE TYL ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA