Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226724

Identifier: 21226724

GI number: 21226724

Start: 754286

End: 754795

Strand: Direct

Name: 21226724

Synonym: MM_0622

Alternate gene names: NA

Gene position: 754286-754795 (Clockwise)

Preceding gene: 21226723

Following gene: 21226725

Centisome position: 18.41

GC content: 30.98

Gene sequence:

>510_bases
ATGGGGAGACCTGAAATCTATCATATTGACCAAAAGATTTCTCTTGAGAAACTTGATTGGCTCATAAAGATTGAAAGAAA
TACTAAAGTTCAACAGAAGTTATATTTTATTCGGTTTAGATATTTAGGCGATTCTATAGAGGAAGCAACATCGAGATTAG
GAGTCACTAAAAGAATTGGTTATTATTGGCAAAATAGATGGAATGAACAAGGTTATGAGGGTTTACTTCACAAATCTGGT
GCAGGTAGACCTTCTTATTTGAGTGATGAGAAAATACTTGAACTCAAGTCAATACTGGAAAGTAAAGACTTTTGGACTAC
AGATGAAGTTAAAGATTTGATAAAAGATAAGTTTGGCATTGATTATTGCTTGAATTCCATAAGAAAACTATTGAAGAAAA
TAGGTATGCACTATAATATTCCTTATTGTTTGGACTATAGAAGACCTGAAAATGCAGAAGAGATTTTAAAAAAATTTAGA
AAATGCAATAAAAGAAAAAACTTCTCCTGA

Upstream 100 bases:

>100_bases
GAGAAATACATTGTTGTGACCCATTTCCAGCGGGTTGTGGAAATTTCGGTTTATAGTCTTCACATAAATTATTTACATTT
ATAAAACCATCTTTATACTT

Downstream 100 bases:

>100_bases
TAAACATTATGTAATAGGCTTCCTTGACGAATCTTCACCACAAACAGCACCAGACACACCAAGGCTGTGGTCATTCGTGA
AAAAACCTAAAATGTTCAAA

Product: transposase

Products: NA

Alternate protein names: Transposase Homolog; Transposase OrfA; Transposase-Like Protein

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MGRPEIYHIDQKISLEKLDWLIKIERNTKVQQKLYFIRFRYLGDSIEEATSRLGVTKRIGYYWQNRWNEQGYEGLLHKSG
AGRPSYLSDEKILELKSILESKDFWTTDEVKDLIKDKFGIDYCLNSIRKLLKKIGMHYNIPYCLDYRRPENAEEILKKFR
KCNKRKNFS

Sequences:

>Translated_169_residues
MGRPEIYHIDQKISLEKLDWLIKIERNTKVQQKLYFIRFRYLGDSIEEATSRLGVTKRIGYYWQNRWNEQGYEGLLHKSG
AGRPSYLSDEKILELKSILESKDFWTTDEVKDLIKDKFGIDYCLNSIRKLLKKIGMHYNIPYCLDYRRPENAEEILKKFR
KCNKRKNFS
>Mature_168_residues
GRPEIYHIDQKISLEKLDWLIKIERNTKVQQKLYFIRFRYLGDSIEEATSRLGVTKRIGYYWQNRWNEQGYEGLLHKSGA
GRPSYLSDEKILELKSILESKDFWTTDEVKDLIKDKFGIDYCLNSIRKLLKKIGMHYNIPYCLDYRRPENAEEILKKFRK
CNKRKNFS

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20352; Mature: 20221

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRPEIYHIDQKISLEKLDWLIKIERNTKVQQKLYFIRFRYLGDSIEEATSRLGVTKRIG
CCCCCEEECCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHH
YYWQNRWNEQGYEGLLHKSGAGRPSYLSDEKILELKSILESKDFWTTDEVKDLIKDKFGI
HHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCH
DYCLNSIRKLLKKIGMHYNIPYCLDYRRPENAEEILKKFRKCNKRKNFS
HHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GRPEIYHIDQKISLEKLDWLIKIERNTKVQQKLYFIRFRYLGDSIEEATSRLGVTKRIG
CCCCEEECCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHHHH
YYWQNRWNEQGYEGLLHKSGAGRPSYLSDEKILELKSILESKDFWTTDEVKDLIKDKFGI
HHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCH
DYCLNSIRKLLKKIGMHYNIPYCLDYRRPENAEEILKKFRKCNKRKNFS
HHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA