| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226723
Identifier: 21226723
GI number: 21226723
Start: 753823
End: 754269
Strand: Direct
Name: 21226723
Synonym: MM_0621
Alternate gene names: NA
Gene position: 753823-754269 (Clockwise)
Preceding gene: 21226722
Following gene: 21226724
Centisome position: 18.4
GC content: 40.94
Gene sequence:
>447_bases TTGAAAACTTTCTTTGAATCCCAGCCCCATGCAGTTCTGGCCACTCAAAACGGAAAAGCACCTTATGCAAGCCTTGTTTC CTTTGCCTCAAACGAAAAGCTTACATATCTGCTTTTTGCGACTCCGAAGGCTACCAGGAAATACTCAAACATTCTGGAAA ACCCTTCAGTGGCACTTTTAATAGATAACCGGAAGAACACAAAAGAGGATATTCAGGAAGCAACTACAGTAACGGCCCTG GGGAGGGTTGAACAGATAGAAGATTTCGAACGCAGCATAATGGAAAAAATCTATTTAATGAAGCACCCGCACCTTGCGGA CTTTCTTAATTCCCCTAAAACTGCTTTTCTGAAAATCCGGGTGGAGAAATACATTGTTGTGACCCATTTCCAGCGGGTTG TGGAAATTTCGGTTTATAGTCTTCACATAAATTATTTACATTTATAA
Upstream 100 bases:
>100_bases AGTTATCCCGCACGGAGTTATCCAGCATGGGCCAGAAGAGGGAATAAAGGAAAGTTCCAGAGAAAAAACAGGGCTGGAGA AAGAAGAATGCATAAGACAG
Downstream 100 bases:
>100_bases AACCATCTTTATACTTATGGGGAGACCTGAAATCTATCATATTGACCAAAAGATTTCTCTTGAGAAACTTGATTGGCTCA TAAAGATTGAAAGAAATACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKTFFESQPHAVLATQNGKAPYASLVSFASNEKLTYLLFATPKATRKYSNILENPSVALLIDNRKNTKEDIQEATTVTAL GRVEQIEDFERSIMEKIYLMKHPHLADFLNSPKTAFLKIRVEKYIVVTHFQRVVEISVYSLHINYLHL
Sequences:
>Translated_148_residues MKTFFESQPHAVLATQNGKAPYASLVSFASNEKLTYLLFATPKATRKYSNILENPSVALLIDNRKNTKEDIQEATTVTAL GRVEQIEDFERSIMEKIYLMKHPHLADFLNSPKTAFLKIRVEKYIVVTHFQRVVEISVYSLHINYLHL >Mature_148_residues MKTFFESQPHAVLATQNGKAPYASLVSFASNEKLTYLLFATPKATRKYSNILENPSVALLIDNRKNTKEDIQEATTVTAL GRVEQIEDFERSIMEKIYLMKHPHLADFLNSPKTAFLKIRVEKYIVVTHFQRVVEISVYSLHINYLHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17029; Mature: 17029
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTFFESQPHAVLATQNGKAPYASLVSFASNEKLTYLLFATPKATRKYSNILENPSVALL CCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEEE IDNRKNTKEDIQEATTVTALGRVEQIEDFERSIMEKIYLMKHPHLADFLNSPKTAFLKIR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEE VEKYIVVTHFQRVVEISVYSLHINYLHL EHHEEEHHHHHHHHHEEEEEEEEEEEEC >Mature Secondary Structure MKTFFESQPHAVLATQNGKAPYASLVSFASNEKLTYLLFATPKATRKYSNILENPSVALL CCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEEE IDNRKNTKEDIQEATTVTALGRVEQIEDFERSIMEKIYLMKHPHLADFLNSPKTAFLKIR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEE VEKYIVVTHFQRVVEISVYSLHINYLHL EHHEEEHHHHHHHHHEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA