Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226723

Identifier: 21226723

GI number: 21226723

Start: 753823

End: 754269

Strand: Direct

Name: 21226723

Synonym: MM_0621

Alternate gene names: NA

Gene position: 753823-754269 (Clockwise)

Preceding gene: 21226722

Following gene: 21226724

Centisome position: 18.4

GC content: 40.94

Gene sequence:

>447_bases
TTGAAAACTTTCTTTGAATCCCAGCCCCATGCAGTTCTGGCCACTCAAAACGGAAAAGCACCTTATGCAAGCCTTGTTTC
CTTTGCCTCAAACGAAAAGCTTACATATCTGCTTTTTGCGACTCCGAAGGCTACCAGGAAATACTCAAACATTCTGGAAA
ACCCTTCAGTGGCACTTTTAATAGATAACCGGAAGAACACAAAAGAGGATATTCAGGAAGCAACTACAGTAACGGCCCTG
GGGAGGGTTGAACAGATAGAAGATTTCGAACGCAGCATAATGGAAAAAATCTATTTAATGAAGCACCCGCACCTTGCGGA
CTTTCTTAATTCCCCTAAAACTGCTTTTCTGAAAATCCGGGTGGAGAAATACATTGTTGTGACCCATTTCCAGCGGGTTG
TGGAAATTTCGGTTTATAGTCTTCACATAAATTATTTACATTTATAA

Upstream 100 bases:

>100_bases
AGTTATCCCGCACGGAGTTATCCAGCATGGGCCAGAAGAGGGAATAAAGGAAAGTTCCAGAGAAAAAACAGGGCTGGAGA
AAGAAGAATGCATAAGACAG

Downstream 100 bases:

>100_bases
AACCATCTTTATACTTATGGGGAGACCTGAAATCTATCATATTGACCAAAAGATTTCTCTTGAGAAACTTGATTGGCTCA
TAAAGATTGAAAGAAATACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKTFFESQPHAVLATQNGKAPYASLVSFASNEKLTYLLFATPKATRKYSNILENPSVALLIDNRKNTKEDIQEATTVTAL
GRVEQIEDFERSIMEKIYLMKHPHLADFLNSPKTAFLKIRVEKYIVVTHFQRVVEISVYSLHINYLHL

Sequences:

>Translated_148_residues
MKTFFESQPHAVLATQNGKAPYASLVSFASNEKLTYLLFATPKATRKYSNILENPSVALLIDNRKNTKEDIQEATTVTAL
GRVEQIEDFERSIMEKIYLMKHPHLADFLNSPKTAFLKIRVEKYIVVTHFQRVVEISVYSLHINYLHL
>Mature_148_residues
MKTFFESQPHAVLATQNGKAPYASLVSFASNEKLTYLLFATPKATRKYSNILENPSVALLIDNRKNTKEDIQEATTVTAL
GRVEQIEDFERSIMEKIYLMKHPHLADFLNSPKTAFLKIRVEKYIVVTHFQRVVEISVYSLHINYLHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17029; Mature: 17029

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFFESQPHAVLATQNGKAPYASLVSFASNEKLTYLLFATPKATRKYSNILENPSVALL
CCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEEE
IDNRKNTKEDIQEATTVTALGRVEQIEDFERSIMEKIYLMKHPHLADFLNSPKTAFLKIR
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEE
VEKYIVVTHFQRVVEISVYSLHINYLHL
EHHEEEHHHHHHHHHEEEEEEEEEEEEC
>Mature Secondary Structure
MKTFFESQPHAVLATQNGKAPYASLVSFASNEKLTYLLFATPKATRKYSNILENPSVALL
CCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEEE
IDNRKNTKEDIQEATTVTALGRVEQIEDFERSIMEKIYLMKHPHLADFLNSPKTAFLKIR
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEEEEEE
VEKYIVVTHFQRVVEISVYSLHINYLHL
EHHEEEHHHHHHHHHEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA