| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226722
Identifier: 21226722
GI number: 21226722
Start: 753388
End: 753642
Strand: Direct
Name: 21226722
Synonym: MM_0620
Alternate gene names: NA
Gene position: 753388-753642 (Clockwise)
Preceding gene: 21226721
Following gene: 21226723
Centisome position: 18.39
GC content: 45.88
Gene sequence:
>255_bases GTGAAAGAACTGGAGGATATGAAAATGAAAGAATACACGCTTGAAGAACTTTCAGAGTTTAACGGCAAGAACGGTAAGAC CTATGTTGTATATGACGGCCAGGTGTACGATGTATCAAACAGCTATCTGTGGGAAGACGGAACTCACCAGGGGCTCCATG AATCAGGAAAGGACCTGACGGAGGATATGGATGAAGCGCCTCACGGACCAGAAGTCTTTAAGGACTATCCTGTTGTCGGG ACTTTGAAGAAGTGA
Upstream 100 bases:
>100_bases AGAGATGCTAAGGATGCTGAATGTTTGAGCCCGGTCTCAGGCTGGTTGCGGATTCCAGGATGGCAGATTCAAATTTATAA AACCAGATTATGACTTTAAC
Downstream 100 bases:
>100_bases CCTGTTATCTAACAGTTTATTTTTTTTAAAAAGAAAAAGGAAAACTGAAGAGTTGTGACTGTGAAAGATAAAAATGAATC AGTTATCCCGCACGGAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MKELEDMKMKEYTLEELSEFNGKNGKTYVVYDGQVYDVSNSYLWEDGTHQGLHESGKDLTEDMDEAPHGPEVFKDYPVVG TLKK
Sequences:
>Translated_84_residues MKELEDMKMKEYTLEELSEFNGKNGKTYVVYDGQVYDVSNSYLWEDGTHQGLHESGKDLTEDMDEAPHGPEVFKDYPVVG TLKK >Mature_84_residues MKELEDMKMKEYTLEELSEFNGKNGKTYVVYDGQVYDVSNSYLWEDGTHQGLHESGKDLTEDMDEAPHGPEVFKDYPVVG TLKK
Specific function: Unknown
COG id: COG4892
COG function: function code R; Predicted heme/steroid binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9666; Mature: 9666
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKELEDMKMKEYTLEELSEFNGKNGKTYVVYDGQVYDVSNSYLWEDGTHQGLHESGKDLT CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCEEECCCCCCCHHHCCCHHH EDMDEAPHGPEVFKDYPVVGTLKK HHHHCCCCCCCHHCCCCCEEECCC >Mature Secondary Structure MKELEDMKMKEYTLEELSEFNGKNGKTYVVYDGQVYDVSNSYLWEDGTHQGLHESGKDLT CCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEECCCCEEECCCCCCCHHHCCCHHH EDMDEAPHGPEVFKDYPVVGTLKK HHHHCCCCCCCHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA