Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is yyaL [H]

Identifier: 21226721

GI number: 21226721

Start: 751213

End: 753315

Strand: Direct

Name: yyaL [H]

Synonym: MM_0619

Alternate gene names: 21226721

Gene position: 751213-753315 (Clockwise)

Preceding gene: 21226720

Following gene: 21226722

Centisome position: 18.34

GC content: 45.27

Gene sequence:

>2103_bases
GTGATTATACTGGAAAAAGAACAGAAAGAACCTAACCGCCTGATTAAAGAAAAAAGTCCTTATCTTCTACAGCATGCCTA
TAATCCTGTAGACTGGTACCCATGGGGAGAAGAGGCTTTCGAAAAAGCCAGAAAAGAAAACAAGCCTGTTTTTCTCTCAA
TCGGATATTCGACCTGCCACTGGTGCCATATGATGGCACATGAGTCTTTTGAGGACGAAGAAGTTGCAGGGCTTATGAAT
GAAGCTTTTGTCTCCATAAAAGTGGACAGGGAAGAACGGCCAGATATCGACAACATTTACATGACTGTCTGCCAGATTAT
CCTTGGCAGAGGAGGATGGCCTCTCAATATCATCATGACTCCGGGCAAGAAGCCTTTTTTTGCTGGCACATATATCCCGA
AAAATACACGCTTTAACCAGATAGGAATGCTGGAACTGGTCCCCAGGATAAAAGAAATCTGGGAACAGCAGCATGAAGAA
GTGCTTGATTCAGCTGAAAAAATTACATCCACCATCCAGGAAATGATTAAGGAGTCTTCAGGAGAAGGGCTCGGGGAAGA
GGTAATAGAAGAGGTTTATGAAGAACTTCTCAGCTCGTTTGATACGGAATACGGAGGTTTTTCAGGAGCTCCGAAGTTCC
CCACTCCCCACAAGATTTCCTTTTTGCTCCGTTACTGGAGGCGCAGCAGAAACCCTGAAGCCCTTCATATGGCAGAATAC
ACACTGGACAAAATGCGCAGGGGAGGGATCTATGACCACCTGGGATCAGGTTTCCATAGATATTCTACGGACAGCATGTG
GCTTCTGCCTCACTTTGAAAAAATGTTATACGACCAGGCTCTTACTGCAATTGCATATACTGAAGCCTATCAGGTTACCG
GAAAAGACCTGTATAAAGAAACAGCAGAAGGAATCCTCGATTACGTCCTGAGAGACCTTACATCCCCGGAAGGAGGTTTT
TACTGCGGTGAGGATGCGGATGTAGAAAGGGAGGAAGGAAAATACTACTTATGGACTCTGGAAGAGATCAGGAGCATCCT
TGATCCTGAGGATTCCGAATTGATAATAAAAATGTTCAATTTGAGAGAGGAAGGAAATTTTGAAGAGGAAATAAGAGGTA
GAGAGACCGGAACAAACCTTTTCTATATGGCTCGGTCTCCAGGGTCACTTGCAGCTAAGATGAAGATTCCTGTAGAAGAA
GTCGAAAAGAAGGTAAAAGCTGCCAGGGAAAAACTCCTTAAAGCCAGATATGAGCGCAAAAGGCCTTCACTGGATGATAA
GATCCTTACCGACTGGAACGGGCTTATGATTGCTGCCTTTGCAAAAGGTTATCAGGTTTTTGGAGAGCAGAGGTATCTGA
AAGCTGCAGAGAAAGCTGCGGATTTTATTCTTATGGCTCTTTACAGTCCAGGGGACGGGCTGCTTCACCGCTACAGGGAC
GGGGTTGCAGGAATCTCAGGAACTTCCGATGACTATGCATTTTTGATTCATGGGCTCCTGGAACTTTACGAGGCGGGATT
CAAAATGCGCTACCTTAAAGCTGCAGTTTCTCTTAACAGCGAGCTTCTCGAATGCTTCTGGGACCCTGTTAACGGCGGAC
TCTACTTTACAGCAAATGACAGCGAGGCTCTTATATTCAGAAAAAAGGAGTTTATGGATTCGGCAATACCTACAGGTAAC
TCATTCGAAATGCTGAATCTTCTGCGCCTCTCCAGAATAATTGCAGACCCCGGACTTGAGGAGACGGCTGACAAACTCGA
ACGCGCGTTTTCAAAACAGATTATGAAAGCGCCTTCTGGATATACTCAGTTCCTGTCAGCCTTTGACTTCAGGCTTGGGC
CTTCATACGAAGTGATAATTTCGGGAAAAGCCGAAGCTTCGGACACGGAACAGATGCTGAAAGAGCTCTGGAGTTATTTT
GTGCCCAACAAGGTGCTTATTTTCAGACCTGAAAGAGAAAAACCTGAAATTACTGAGCTGGCAAAGTATACAGAAGAGCA
GGTCCCAATTGAAGGAAAGGCAACTGCATACGTCTGCCAGAACTACGAATGCCAGCTTCCCACCACAGAGATCAGAGAGA
TGCTAAGGATGCTGAATGTTTGA

Upstream 100 bases:

>100_bases
GTCCTTTTATGAATATTTATGAAGAGTTCAGTCCTTATGCCTGCGAGGAGTACACTTCAGGGCTTGAAAGGCAGGATCTG
GATCTTGATGAAGAGCAGGA

Downstream 100 bases:

>100_bases
GCCCGGTCTCAGGCTGGTTGCGGATTCCAGGATGGCAGATTCAAATTTATAAAACCAGATTATGACTTTAACGTGAAAGA
ACTGGAGGATATGAAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 700; Mature: 700

Protein sequence:

>700_residues
MIILEKEQKEPNRLIKEKSPYLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN
EAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQQHEE
VLDSAEKITSTIQEMIKESSGEGLGEEVIEEVYEELLSSFDTEYGGFSGAPKFPTPHKISFLLRYWRRSRNPEALHMAEY
TLDKMRRGGIYDHLGSGFHRYSTDSMWLLPHFEKMLYDQALTAIAYTEAYQVTGKDLYKETAEGILDYVLRDLTSPEGGF
YCGEDADVEREEGKYYLWTLEEIRSILDPEDSELIIKMFNLREEGNFEEEIRGRETGTNLFYMARSPGSLAAKMKIPVEE
VEKKVKAAREKLLKARYERKRPSLDDKILTDWNGLMIAAFAKGYQVFGEQRYLKAAEKAADFILMALYSPGDGLLHRYRD
GVAGISGTSDDYAFLIHGLLELYEAGFKMRYLKAAVSLNSELLECFWDPVNGGLYFTANDSEALIFRKKEFMDSAIPTGN
SFEMLNLLRLSRIIADPGLEETADKLERAFSKQIMKAPSGYTQFLSAFDFRLGPSYEVIISGKAEASDTEQMLKELWSYF
VPNKVLIFRPEREKPEITELAKYTEEQVPIEGKATAYVCQNYECQLPTTEIREMLRMLNV

Sequences:

>Translated_700_residues
MIILEKEQKEPNRLIKEKSPYLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN
EAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQQHEE
VLDSAEKITSTIQEMIKESSGEGLGEEVIEEVYEELLSSFDTEYGGFSGAPKFPTPHKISFLLRYWRRSRNPEALHMAEY
TLDKMRRGGIYDHLGSGFHRYSTDSMWLLPHFEKMLYDQALTAIAYTEAYQVTGKDLYKETAEGILDYVLRDLTSPEGGF
YCGEDADVEREEGKYYLWTLEEIRSILDPEDSELIIKMFNLREEGNFEEEIRGRETGTNLFYMARSPGSLAAKMKIPVEE
VEKKVKAAREKLLKARYERKRPSLDDKILTDWNGLMIAAFAKGYQVFGEQRYLKAAEKAADFILMALYSPGDGLLHRYRD
GVAGISGTSDDYAFLIHGLLELYEAGFKMRYLKAAVSLNSELLECFWDPVNGGLYFTANDSEALIFRKKEFMDSAIPTGN
SFEMLNLLRLSRIIADPGLEETADKLERAFSKQIMKAPSGYTQFLSAFDFRLGPSYEVIISGKAEASDTEQMLKELWSYF
VPNKVLIFRPEREKPEITELAKYTEEQVPIEGKATAYVCQNYECQLPTTEIREMLRMLNV
>Mature_700_residues
MIILEKEQKEPNRLIKEKSPYLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN
EAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQQHEE
VLDSAEKITSTIQEMIKESSGEGLGEEVIEEVYEELLSSFDTEYGGFSGAPKFPTPHKISFLLRYWRRSRNPEALHMAEY
TLDKMRRGGIYDHLGSGFHRYSTDSMWLLPHFEKMLYDQALTAIAYTEAYQVTGKDLYKETAEGILDYVLRDLTSPEGGF
YCGEDADVEREEGKYYLWTLEEIRSILDPEDSELIIKMFNLREEGNFEEEIRGRETGTNLFYMARSPGSLAAKMKIPVEE
VEKKVKAAREKLLKARYERKRPSLDDKILTDWNGLMIAAFAKGYQVFGEQRYLKAAEKAADFILMALYSPGDGLLHRYRD
GVAGISGTSDDYAFLIHGLLELYEAGFKMRYLKAAVSLNSELLECFWDPVNGGLYFTANDSEALIFRKKEFMDSAIPTGN
SFEMLNLLRLSRIIADPGLEETADKLERAFSKQIMKAPSGYTQFLSAFDFRLGPSYEVIISGKAEASDTEQMLKELWSYF
VPNKVLIFRPEREKPEITELAKYTEEQVPIEGKATAYVCQNYECQLPTTEIREMLRMLNV

Specific function: Unknown

COG id: COG1331

COG function: function code O; Highly conserved protein containing a thioredoxin domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.elegans B0495.5 [H]

Homologues:

Organism=Homo sapiens, GI31542723, Length=730, Percent_Identity=40.1369863013699, Blast_Score=555, Evalue=1e-158,
Organism=Caenorhabditis elegans, GI25147430, Length=719, Percent_Identity=35.4659248956885, Blast_Score=425, Evalue=1e-119,
Organism=Drosophila melanogaster, GI20129985, Length=731, Percent_Identity=36.7989056087551, Blast_Score=463, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819
- InterPro:   IPR004879
- InterPro:   IPR005198
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]

EC number: NA

Molecular weight: Translated: 80643; Mature: 80643

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILEKEQKEPNRLIKEKSPYLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCH
CEEECCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHH
WCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMT
HHHHHHHCCCCHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEC
PGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQQHEEVLDSAEKITSTIQEMIKESS
CCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEGLGEEVIEEVYEELLSSFDTEYGGFSGAPKFPTPHKISFLLRYWRRSRNPEALHMAEY
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
TLDKMRRGGIYDHLGSGFHRYSTDSMWLLPHFEKMLYDQALTAIAYTEAYQVTGKDLYKE
HHHHHHCCCCHHHHCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
TAEGILDYVLRDLTSPEGGFYCGEDADVEREEGKYYLWTLEEIRSILDPEDSELIIKMFN
HHHHHHHHHHHHHCCCCCCEECCCCCCCHHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHH
LREEGNFEEEIRGRETGTNLFYMARSPGSLAAKMKIPVEEVEKKVKAAREKLLKARYERK
CCCCCCCHHHHCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHC
RPSLDDKILTDWNGLMIAAFAKGYQVFGEQRYLKAAEKAADFILMALYSPGDGLLHRYRD
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHC
GVAGISGTSDDYAFLIHGLLELYEAGFKMRYLKAAVSLNSELLECFWDPVNGGLYFTAND
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
SEALIFRKKEFMDSAIPTGNSFEMLNLLRLSRIIADPGLEETADKLERAFSKQIMKAPSG
CCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCH
YTQFLSAFDFRLGPSYEVIISGKAEASDTEQMLKELWSYFVPNKVLIFRPEREKPEITEL
HHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
AKYTEEQVPIEGKATAYVCQNYECQLPTTEIREMLRMLNV
HHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIILEKEQKEPNRLIKEKSPYLLQHAYNPVDWYPWGEEAFEKARKENKPVFLSIGYSTCH
CEEECCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHH
WCHMMAHESFEDEEVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMT
HHHHHHHCCCCHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEC
PGKKPFFAGTYIPKNTRFNQIGMLELVPRIKEIWEQQHEEVLDSAEKITSTIQEMIKESS
CCCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEGLGEEVIEEVYEELLSSFDTEYGGFSGAPKFPTPHKISFLLRYWRRSRNPEALHMAEY
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH
TLDKMRRGGIYDHLGSGFHRYSTDSMWLLPHFEKMLYDQALTAIAYTEAYQVTGKDLYKE
HHHHHHCCCCHHHHCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
TAEGILDYVLRDLTSPEGGFYCGEDADVEREEGKYYLWTLEEIRSILDPEDSELIIKMFN
HHHHHHHHHHHHHCCCCCCEECCCCCCCHHHCCCEEEEEHHHHHHHHCCCCHHHHHHHHH
LREEGNFEEEIRGRETGTNLFYMARSPGSLAAKMKIPVEEVEKKVKAAREKLLKARYERK
CCCCCCCHHHHCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHC
RPSLDDKILTDWNGLMIAAFAKGYQVFGEQRYLKAAEKAADFILMALYSPGDGLLHRYRD
CCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHC
GVAGISGTSDDYAFLIHGLLELYEAGFKMRYLKAAVSLNSELLECFWDPVNGGLYFTAND
CCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
SEALIFRKKEFMDSAIPTGNSFEMLNLLRLSRIIADPGLEETADKLERAFSKQIMKAPSG
CCEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCH
YTQFLSAFDFRLGPSYEVIISGKAEASDTEQMLKELWSYFVPNKVLIFRPEREKPEITEL
HHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
AKYTEEQVPIEGKATAYVCQNYECQLPTTEIREMLRMLNV
HHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]