| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226707
Identifier: 21226707
GI number: 21226707
Start: 736710
End: 737306
Strand: Direct
Name: 21226707
Synonym: MM_0605
Alternate gene names: NA
Gene position: 736710-737306 (Clockwise)
Preceding gene: 21226705
Following gene: 21226710
Centisome position: 17.98
GC content: 47.07
Gene sequence:
>597_bases ATGAAAAATATTATTTCCGACACTGAAGCCGCAGATACGATTCCCCTTAAACTTGTGGTGTATCTCGCGCTTCTGGCTGC GGTGGTGGTCCTACTGGCTCAGGCATGGAGTATAGCCTCACCTGCCCTTCAGGATGCGGAAATAAAAGCCCAGGCAGAAA CCGCTTCCCTTTCCCTTCTCTCAATTCAGGGAGGATACGCCCGTAATTCGGAAGACAGATACAACCCTGAAGGCAGCATG TGTACCCTCAAATTTTCTCTTCCGCCGTCTGTCAGGTATGTCAGTTTCGGAGTGGACCCTGACCAGGAATGCAACGGCAA CCTGACTGACTCGGAATGGGTTATTGAGAATAATACCCTTATTTGCCAGTACAAAAACGGAGTTAAAAAGAGAGTGTTTC TTGAAGGGGCGCCGATCCATTTTATAAAAGGCATAGAAAACTCAGAAGGCATATGGATTCCGGCCGCCAGCCAGGAAGGT GATGAAACTTTAGATCTCCAAAACACATCAGTGATAATAGAATACCCTGTTTCAGGTGAATTCCTTTTTGAGATGGTTAC CCACAACGGTACAAGGTATACAATGGCGCGCTTCTGA
Upstream 100 bases:
>100_bases TGTCTTTCATCTTCAAGTTTTCCTTTTAGTTTTTAGTCTTCAGAGTTCTCTCCTTTCATGAGGTAAAATTTTTTATTATG TAGAGATCATTTACAATCAT
Downstream 100 bases:
>100_bases AAGTCAGGAAAAAAACAGGCGAAAGCCAGAGGGGAAAGGGAAATTCAGAAAAAACCGGGGAAAATCAGGAGTAAGGTATC AGCAATGCTCTTGCCGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKNIISDTEAADTIPLKLVVYLALLAAVVVLLAQAWSIASPALQDAEIKAQAETASLSLLSIQGGYARNSEDRYNPEGSM CTLKFSLPPSVRYVSFGVDPDQECNGNLTDSEWVIENNTLICQYKNGVKKRVFLEGAPIHFIKGIENSEGIWIPAASQEG DETLDLQNTSVIIEYPVSGEFLFEMVTHNGTRYTMARF
Sequences:
>Translated_198_residues MKNIISDTEAADTIPLKLVVYLALLAAVVVLLAQAWSIASPALQDAEIKAQAETASLSLLSIQGGYARNSEDRYNPEGSM CTLKFSLPPSVRYVSFGVDPDQECNGNLTDSEWVIENNTLICQYKNGVKKRVFLEGAPIHFIKGIENSEGIWIPAASQEG DETLDLQNTSVIIEYPVSGEFLFEMVTHNGTRYTMARF >Mature_198_residues MKNIISDTEAADTIPLKLVVYLALLAAVVVLLAQAWSIASPALQDAEIKAQAETASLSLLSIQGGYARNSEDRYNPEGSM CTLKFSLPPSVRYVSFGVDPDQECNGNLTDSEWVIENNTLICQYKNGVKKRVFLEGAPIHFIKGIENSEGIWIPAASQEG DETLDLQNTSVIIEYPVSGEFLFEMVTHNGTRYTMARF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21781; Mature: 21781
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIISDTEAADTIPLKLVVYLALLAAVVVLLAQAWSIASPALQDAEIKAQAETASLSLL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEE SIQGGYARNSEDRYNPEGSMCTLKFSLPPSVRYVSFGVDPDQECNGNLTDSEWVIENNTL EECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCEE ICQYKNGVKKRVFLEGAPIHFIKGIENSEGIWIPAASQEGDETLDLQNTSVIIEYPVSGE EEEECCCCCEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCEEEECCCEEEEEECCCCC FLFEMVTHNGTRYTMARF EEEEEECCCCCEEEEECC >Mature Secondary Structure MKNIISDTEAADTIPLKLVVYLALLAAVVVLLAQAWSIASPALQDAEIKAQAETASLSLL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEE SIQGGYARNSEDRYNPEGSMCTLKFSLPPSVRYVSFGVDPDQECNGNLTDSEWVIENNTL EECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCEE ICQYKNGVKKRVFLEGAPIHFIKGIENSEGIWIPAASQEGDETLDLQNTSVIIEYPVSGE EEEECCCCCEEEEECCCCEEEEECCCCCCCEEEECCCCCCCCEEEECCCEEEEEECCCCC FLFEMVTHNGTRYTMARF EEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA