Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226710

Identifier: 21226710

GI number: 21226710

Start: 738541

End: 739602

Strand: Direct

Name: 21226710

Synonym: MM_0608

Alternate gene names: NA

Gene position: 738541-739602 (Clockwise)

Preceding gene: 21226707

Following gene: 21226711

Centisome position: 18.03

GC content: 47.46

Gene sequence:

>1062_bases
ATGGAAAAGTTCACAGAGGATGAAACAGGCTCTTTTTGCAGTTACCTTTCAGAAGGCTGTAAACTCTGCCAGCAGGGTGC
CAAGATGGTACTCTTTGTAACCGGGCTCTGCCCTAAAAGCTGTTTTTACTGCCCTCTTTCCGACGAAAGGCGCGGTAAGG
ACCTTGTTTTTGCAAACGAAAGGCATGTAAAAAACGACGAGGACCTGATCAAAGAAGCTGAGATTATGGACGCGCTGGGT
ACAGGGATCACAGGCGGAGAACCCTTACTTAAGGTAGAGAGAGTCCTGTACTATATCCACCTGCTTAAAGCTTATTTCGG
GAAAAACCACCATATTCACCTTTATACTTCTCTTGCTCCGGATAGGGAAACCCTTGAAAAGCTGGCAGAAGCAGGCCTGG
ACGAGATACGCTTCCATCCGCCTCAGTCAGTCTGGGGAGAACTGGGAAAAAGCCCTTACGCAGCCGCCCTGAAAAATGCG
AAGGATCTGGGAATTGAGGCAGGGATTGAAATACCTTCTCTCGAAGGCGCTGAAAAGGTCGCAGCTTTTGCAGAGGAAAT
GGGGATTTTCCTCAACCTCAACGAACTGGAATTTTCCGACAATAACTCCGAAGCGCTTCTGAAAAAAGGGTTTTCCCTTG
AGTCAGATATTTCGTGCGCTGCAGAAGGCTCCTCCTTGCATGCTGAAAAGGCTTTCTTCGCCTGCGAAAGGGTGCATTTC
TGCTCTTCCACCTATAAGGACGCAGTCCAGCTGCGCAAAAGGTTTCAGAGAATTGCAAAAAACACAGCAAGGGAATTTGA
CGAGATTACGGAAGAGGGAACTCTTATTTACGGGGTTATCGATGGGGGAGACCAGGCACTTGCAGAAGAAATCCTGACGG
AAGCAGATGTTCCTGAAGAACTTTTTGAAGTAAACGAAGGGAAAATAGAGCTGGCATGGTGGGTTCTTGAAGACCTAAAG
GATGGGCTTAAAGAAGAGCTGGAACCCTCCGGAACAAAGATATTCATTGTTGAGAGGCATCCATTTGAAGACGGGATGCT
TGTAGAGCTCATTCCTTTATGA

Upstream 100 bases:

>100_bases
AGGGAAATTATATTTCATAAAAAATCATTGTTCCACCAGCAACCGAAAAAGAGGTCAGGAAACAATCCTTATATAGGACA
AAAGGATATGCAATCTCAGA

Downstream 100 bases:

>100_bases
GCATGAATATCCGAACTTATACCCTTATTCATTTAACAAAACCAATTCAAAATCTGTCCAGCAAGCTCAGAAAGGGTCAA
AATTTTATAGAAGATTGACC

Product: putative radical-forming protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MEKFTEDETGSFCSYLSEGCKLCQQGAKMVLFVTGLCPKSCFYCPLSDERRGKDLVFANERHVKNDEDLIKEAEIMDALG
TGITGGEPLLKVERVLYYIHLLKAYFGKNHHIHLYTSLAPDRETLEKLAEAGLDEIRFHPPQSVWGELGKSPYAAALKNA
KDLGIEAGIEIPSLEGAEKVAAFAEEMGIFLNLNELEFSDNNSEALLKKGFSLESDISCAAEGSSLHAEKAFFACERVHF
CSSTYKDAVQLRKRFQRIAKNTAREFDEITEEGTLIYGVIDGGDQALAEEILTEADVPEELFEVNEGKIELAWWVLEDLK
DGLKEELEPSGTKIFIVERHPFEDGMLVELIPL

Sequences:

>Translated_353_residues
MEKFTEDETGSFCSYLSEGCKLCQQGAKMVLFVTGLCPKSCFYCPLSDERRGKDLVFANERHVKNDEDLIKEAEIMDALG
TGITGGEPLLKVERVLYYIHLLKAYFGKNHHIHLYTSLAPDRETLEKLAEAGLDEIRFHPPQSVWGELGKSPYAAALKNA
KDLGIEAGIEIPSLEGAEKVAAFAEEMGIFLNLNELEFSDNNSEALLKKGFSLESDISCAAEGSSLHAEKAFFACERVHF
CSSTYKDAVQLRKRFQRIAKNTAREFDEITEEGTLIYGVIDGGDQALAEEILTEADVPEELFEVNEGKIELAWWVLEDLK
DGLKEELEPSGTKIFIVERHPFEDGMLVELIPL
>Mature_353_residues
MEKFTEDETGSFCSYLSEGCKLCQQGAKMVLFVTGLCPKSCFYCPLSDERRGKDLVFANERHVKNDEDLIKEAEIMDALG
TGITGGEPLLKVERVLYYIHLLKAYFGKNHHIHLYTSLAPDRETLEKLAEAGLDEIRFHPPQSVWGELGKSPYAAALKNA
KDLGIEAGIEIPSLEGAEKVAAFAEEMGIFLNLNELEFSDNNSEALLKKGFSLESDISCAAEGSSLHAEKAFFACERVHF
CSSTYKDAVQLRKRFQRIAKNTAREFDEITEEGTLIYGVIDGGDQALAEEILTEADVPEELFEVNEGKIELAWWVLEDLK
DGLKEELEPSGTKIFIVERHPFEDGMLVELIPL

Specific function: Unknown

COG id: COG2108

COG function: function code R; Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the organic radical-activating enzymes family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39442; Mature: 39442

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKFTEDETGSFCSYLSEGCKLCQQGAKMVLFVTGLCPKSCFYCPLSDERRGKDLVFANE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEECC
RHVKNDEDLIKEAEIMDALGTGITGGEPLLKVERVLYYIHLLKAYFGKNHHIHLYTSLAP
CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
DRETLEKLAEAGLDEIRFHPPQSVWGELGKSPYAAALKNAKDLGIEAGIEIPSLEGAEKV
CHHHHHHHHHCCHHHHCCCCCHHHHHHHCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHHH
AAFAEEMGIFLNLNELEFSDNNSEALLKKGFSLESDISCAAEGSSLHAEKAFFACERVHF
HHHHHHCCEEEEECEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
CSSTYKDAVQLRKRFQRIAKNTAREFDEITEEGTLIYGVIDGGDQALAEEILTEADVPEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCHH
LFEVNEGKIELAWWVLEDLKDGLKEELEPSGTKIFIVERHPFEDGMLVELIPL
HHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECC
>Mature Secondary Structure
MEKFTEDETGSFCSYLSEGCKLCQQGAKMVLFVTGLCPKSCFYCPLSDERRGKDLVFANE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEECC
RHVKNDEDLIKEAEIMDALGTGITGGEPLLKVERVLYYIHLLKAYFGKNHHIHLYTSLAP
CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC
DRETLEKLAEAGLDEIRFHPPQSVWGELGKSPYAAALKNAKDLGIEAGIEIPSLEGAEKV
CHHHHHHHHHCCHHHHCCCCCHHHHHHHCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHHH
AAFAEEMGIFLNLNELEFSDNNSEALLKKGFSLESDISCAAEGSSLHAEKAFFACERVHF
HHHHHHCCEEEEECEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
CSSTYKDAVQLRKRFQRIAKNTAREFDEITEEGTLIYGVIDGGDQALAEEILTEADVPEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCHH
LFEVNEGKIELAWWVLEDLKDGLKEELEPSGTKIFIVERHPFEDGMLVELIPL
HHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]