| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21226710
Identifier: 21226710
GI number: 21226710
Start: 738541
End: 739602
Strand: Direct
Name: 21226710
Synonym: MM_0608
Alternate gene names: NA
Gene position: 738541-739602 (Clockwise)
Preceding gene: 21226707
Following gene: 21226711
Centisome position: 18.03
GC content: 47.46
Gene sequence:
>1062_bases ATGGAAAAGTTCACAGAGGATGAAACAGGCTCTTTTTGCAGTTACCTTTCAGAAGGCTGTAAACTCTGCCAGCAGGGTGC CAAGATGGTACTCTTTGTAACCGGGCTCTGCCCTAAAAGCTGTTTTTACTGCCCTCTTTCCGACGAAAGGCGCGGTAAGG ACCTTGTTTTTGCAAACGAAAGGCATGTAAAAAACGACGAGGACCTGATCAAAGAAGCTGAGATTATGGACGCGCTGGGT ACAGGGATCACAGGCGGAGAACCCTTACTTAAGGTAGAGAGAGTCCTGTACTATATCCACCTGCTTAAAGCTTATTTCGG GAAAAACCACCATATTCACCTTTATACTTCTCTTGCTCCGGATAGGGAAACCCTTGAAAAGCTGGCAGAAGCAGGCCTGG ACGAGATACGCTTCCATCCGCCTCAGTCAGTCTGGGGAGAACTGGGAAAAAGCCCTTACGCAGCCGCCCTGAAAAATGCG AAGGATCTGGGAATTGAGGCAGGGATTGAAATACCTTCTCTCGAAGGCGCTGAAAAGGTCGCAGCTTTTGCAGAGGAAAT GGGGATTTTCCTCAACCTCAACGAACTGGAATTTTCCGACAATAACTCCGAAGCGCTTCTGAAAAAAGGGTTTTCCCTTG AGTCAGATATTTCGTGCGCTGCAGAAGGCTCCTCCTTGCATGCTGAAAAGGCTTTCTTCGCCTGCGAAAGGGTGCATTTC TGCTCTTCCACCTATAAGGACGCAGTCCAGCTGCGCAAAAGGTTTCAGAGAATTGCAAAAAACACAGCAAGGGAATTTGA CGAGATTACGGAAGAGGGAACTCTTATTTACGGGGTTATCGATGGGGGAGACCAGGCACTTGCAGAAGAAATCCTGACGG AAGCAGATGTTCCTGAAGAACTTTTTGAAGTAAACGAAGGGAAAATAGAGCTGGCATGGTGGGTTCTTGAAGACCTAAAG GATGGGCTTAAAGAAGAGCTGGAACCCTCCGGAACAAAGATATTCATTGTTGAGAGGCATCCATTTGAAGACGGGATGCT TGTAGAGCTCATTCCTTTATGA
Upstream 100 bases:
>100_bases AGGGAAATTATATTTCATAAAAAATCATTGTTCCACCAGCAACCGAAAAAGAGGTCAGGAAACAATCCTTATATAGGACA AAAGGATATGCAATCTCAGA
Downstream 100 bases:
>100_bases GCATGAATATCCGAACTTATACCCTTATTCATTTAACAAAACCAATTCAAAATCTGTCCAGCAAGCTCAGAAAGGGTCAA AATTTTATAGAAGATTGACC
Product: putative radical-forming protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MEKFTEDETGSFCSYLSEGCKLCQQGAKMVLFVTGLCPKSCFYCPLSDERRGKDLVFANERHVKNDEDLIKEAEIMDALG TGITGGEPLLKVERVLYYIHLLKAYFGKNHHIHLYTSLAPDRETLEKLAEAGLDEIRFHPPQSVWGELGKSPYAAALKNA KDLGIEAGIEIPSLEGAEKVAAFAEEMGIFLNLNELEFSDNNSEALLKKGFSLESDISCAAEGSSLHAEKAFFACERVHF CSSTYKDAVQLRKRFQRIAKNTAREFDEITEEGTLIYGVIDGGDQALAEEILTEADVPEELFEVNEGKIELAWWVLEDLK DGLKEELEPSGTKIFIVERHPFEDGMLVELIPL
Sequences:
>Translated_353_residues MEKFTEDETGSFCSYLSEGCKLCQQGAKMVLFVTGLCPKSCFYCPLSDERRGKDLVFANERHVKNDEDLIKEAEIMDALG TGITGGEPLLKVERVLYYIHLLKAYFGKNHHIHLYTSLAPDRETLEKLAEAGLDEIRFHPPQSVWGELGKSPYAAALKNA KDLGIEAGIEIPSLEGAEKVAAFAEEMGIFLNLNELEFSDNNSEALLKKGFSLESDISCAAEGSSLHAEKAFFACERVHF CSSTYKDAVQLRKRFQRIAKNTAREFDEITEEGTLIYGVIDGGDQALAEEILTEADVPEELFEVNEGKIELAWWVLEDLK DGLKEELEPSGTKIFIVERHPFEDGMLVELIPL >Mature_353_residues MEKFTEDETGSFCSYLSEGCKLCQQGAKMVLFVTGLCPKSCFYCPLSDERRGKDLVFANERHVKNDEDLIKEAEIMDALG TGITGGEPLLKVERVLYYIHLLKAYFGKNHHIHLYTSLAPDRETLEKLAEAGLDEIRFHPPQSVWGELGKSPYAAALKNA KDLGIEAGIEIPSLEGAEKVAAFAEEMGIFLNLNELEFSDNNSEALLKKGFSLESDISCAAEGSSLHAEKAFFACERVHF CSSTYKDAVQLRKRFQRIAKNTAREFDEITEEGTLIYGVIDGGDQALAEEILTEADVPEELFEVNEGKIELAWWVLEDLK DGLKEELEPSGTKIFIVERHPFEDGMLVELIPL
Specific function: Unknown
COG id: COG2108
COG function: function code R; Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the organic radical-activating enzymes family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006638 - InterPro: IPR001989 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 39442; Mature: 39442
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFTEDETGSFCSYLSEGCKLCQQGAKMVLFVTGLCPKSCFYCPLSDERRGKDLVFANE CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEECC RHVKNDEDLIKEAEIMDALGTGITGGEPLLKVERVLYYIHLLKAYFGKNHHIHLYTSLAP CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC DRETLEKLAEAGLDEIRFHPPQSVWGELGKSPYAAALKNAKDLGIEAGIEIPSLEGAEKV CHHHHHHHHHCCHHHHCCCCCHHHHHHHCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHHH AAFAEEMGIFLNLNELEFSDNNSEALLKKGFSLESDISCAAEGSSLHAEKAFFACERVHF HHHHHHCCEEEEECEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH CSSTYKDAVQLRKRFQRIAKNTAREFDEITEEGTLIYGVIDGGDQALAEEILTEADVPEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCHH LFEVNEGKIELAWWVLEDLKDGLKEELEPSGTKIFIVERHPFEDGMLVELIPL HHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECC >Mature Secondary Structure MEKFTEDETGSFCSYLSEGCKLCQQGAKMVLFVTGLCPKSCFYCPLSDERRGKDLVFANE CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCCCCCEEEECC RHVKNDEDLIKEAEIMDALGTGITGGEPLLKVERVLYYIHLLKAYFGKNHHIHLYTSLAP CCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC DRETLEKLAEAGLDEIRFHPPQSVWGELGKSPYAAALKNAKDLGIEAGIEIPSLEGAEKV CHHHHHHHHHCCHHHHCCCCCHHHHHHHCCCHHHHHHCCHHHCCCCCCCCCCCCCCHHHH AAFAEEMGIFLNLNELEFSDNNSEALLKKGFSLESDISCAAEGSSLHAEKAFFACERVHF HHHHHHCCEEEEECEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH CSSTYKDAVQLRKRFQRIAKNTAREFDEITEEGTLIYGVIDGGDQALAEEILTEADVPEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCHH LFEVNEGKIELAWWVLEDLKDGLKEELEPSGTKIFIVERHPFEDGMLVELIPL HHHCCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]